ID	TEstatus	log2FC_TE	pvalue	p.adjust	Name	TF	GO	KEGG	Nr	wt_1	wt_2	h3_1	h3_2
AT1G64790	down	-6.013126872578892	8.845240655164248e-186	2.2511137467393006e-182	AT1G64790	--	GO:0005634,nucleus; GO:0005829,cytosol; GO:0006417,regulation of translation; GO:0009627,systemic acquired resistance; GO:0009682,induced systemic resistance; GO:0019887,protein kinase regulator activity; GO:0019901,protein kinase binding; GO:0033674,positive regulation of kinase activity; GO:0034198,cellular response to amino acid starvation; GO:0042742,defense response to bacterium; GO:0043022,ribosome binding; GO:0045087,innate immune response;	--	NP_001322207.1 ILITYHIA [Arabidopsis thaliana]	731	744	630	510
AT3G28900	down	-7.200276632159319	6.045667871075857e-116	7.69311236594403e-113	AT3G28900	--	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042254,ribosome biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex;	RP-L34e, RPL34; large subunit ribosomal protein L34e; K02915;	NP_189532.1 Ribosomal protein L34e superfamily protein [Arabidopsis thaliana]	290	263	277	188
AT1G74550	down	-3.170062872113195	2.0608076921863752e-32	1.748251858871442e-29	AT1G74550	--	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008216,spermidine metabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0072547,tricoumaroylspermidine meta-hydroxylase activity; GO:0072548,dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity; GO:0072549,monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity;	CYP98A9; cytochrome P450 family 98 subfamily A polypeptide 9 [EC:1.14.13.-]; K23662;	NP_177595.1 cytochrome P450, family 98, subfamily A, polypeptide 9 [Arabidopsis thaliana]	458	372	113	83
AT4G23800	down	-3.074612387211685	7.459396622919407e-27	4.746041101332472e-24	AT4G23800	--	GO:0000793,condensed chromosome; GO:0000794,condensed nuclear chromosome; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription;	--	NP_194111.1 HMG (high mobility group) box protein [Arabidopsis thaliana]	475	404	276	230
AT5G44180	down	-5.403629606061854	4.6804750134315336e-24	2.38236178183665e-21	AT5G44180	HB-other	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009908,flower development; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0031010,ISWI-type complex; GO:0043229,intracellular organelle; GO:0045892,negative regulation of DNA-templated transcription;	--	NP_001318738.1 Homeodomain-like transcriptional regulator [Arabidopsis thaliana]	161	134	100	87
AT1G12840	down	-1.5666369116776793	1.319531121942205e-19	5.59701117557152e-17	AT1G12840	--	GO:0000221,vacuolar proton-transporting V-type ATPase, V1 domain; GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0009507,chloroplast; GO:0009826,unidimensional cell growth; GO:0015078,proton transmembrane transporter activity; GO:0016020,membrane; GO:0033180,proton-transporting V-type ATPase, V1 domain; GO:0046961,proton-transporting ATPase activity, rotational mechanism; GO:1902600,proton transmembrane transport;	ATPeV1C, ATP6C; V-type H+-transporting ATPase subunit C; K02148;	NP_563916.1 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) [Arabidopsis thaliana]	894	778	561	403
AT5G46700	down	-3.1039366902318877	2.3003274400748845e-17	8.36333333570083e-15	AT5G46700	--	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009554,megasporogenesis; GO:0009734,auxin-activated signaling pathway; GO:0009933,meristem structural organization; GO:0009934,regulation of meristem structural organization; GO:0009956,radial pattern formation; GO:0010015,root morphogenesis; GO:0010305,leaf vascular tissue pattern formation; GO:0016020,membrane; GO:0016021,integral component of membrane;	--	NP_199482.1 Tetraspanin family protein [Arabidopsis thaliana]	154	174	81	86
AT2G17695	down	-6.435321374441748	5.981237852432756e-16	1.9027812918051705e-13	AT2G17695	--	GO:0005739,mitochondrion; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009941,chloroplast envelope;	--	NP_001118341.1 outer envelope protein [Arabidopsis thaliana]	30	45	25	19
AT1G21160	up	3.3256158158740106	4.214093103130005e-15	1.1916518830517625e-12	AT1G21160	--	GO:0000166,nucleotide binding; GO:0003743,translation initiation factor activity; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006413,translational initiation; GO:0008150,biological_process;	EIF5B; translation initiation factor 5B; K03243;	NP_173540.2 eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]	37	16	296	222
AT3G10720	down	-2.572524854546513	6.282498432577117e-14	1.5988958510908762e-11	AT3G10720	--	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; GO:0071555,cell wall organization;	E3.1.1.11; pectinesterase [EC:3.1.1.11]; K01051;	NP_187683.2 Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]	187	171	98	92
AT1G03140	up	3.729770365680059	1.4206440862555306e-13	3.2868538177457494e-11	AT1G03140	--	GO:0000350,generation of catalytic spliceosome for second transesterification step; GO:0000380,alternative mRNA splicing, via spliceosome; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005682,U5 snRNP; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0046540,U4/U6 x U5 tri-snRNP complex; GO:0071021,U2-type post-spliceosomal complex; GO:0110165,cellular anatomical entity;	PRPF18, PRP18; pre-mRNA-splicing factor 18; K12817;	NP_563676.1 splicing factor Prp18 family protein [Arabidopsis thaliana]	188	172	165	138
AT1G14650	down	-3.436389480566657	7.724384320296391e-13	1.512196776550332e-10	AT1G14650	--	GO:0000398,mRNA splicing, via spliceosome; GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005684,U2-type spliceosomal complex; GO:0005686,U2 snRNP; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0045292,mRNA cis splicing, via spliceosome; GO:0071004,U2-type prespliceosome; GO:0071013,catalytic step 2 spliceosome;	SF3A1, SAP114; splicing factor 3A subunit 1; K12825;	AAF63169.1 T5E21.13 [Arabidopsis thaliana]	319	278	290	177
AT5G37500	down	-4.2626336070841795	1.0159146594444977e-12	1.8467877202044614e-10	AT5G37500	--	GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005249,voltage-gated potassium channel activity; GO:0005267,potassium channel activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006811,ion transport; GO:0006813,potassium ion transport; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009737,response to abscisic acid; GO:0009753,response to jasmonic acid; GO:0015075,ion transmembrane transporter activity; GO:0015271,outward rectifier potassium channel activity; GO:0016020,membrane; GO:0034765,regulation of ion transmembrane transport; GO:0051592,response to calcium ion; GO:0055085,transmembrane transport; GO:0071805,potassium ion transmembrane transport;	--	NP_001332118.1 gated outwardly-rectifying K+ channel [Arabidopsis thaliana]	67	59	68	31
AT3G61630	up	3.037714462609456	5.082246598930265e-12	8.622878396185014e-10	AT3G61630	ERF	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009736,cytokinin-activated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0048366,leaf development; GO:0048825,cotyledon development;	--	NP_191722.1 cytokinin response factor 6 [Arabidopsis thaliana]	29	20	156	92
AT1G23400	down	-2.153486596100449	5.449678704328905e-12	8.668395189073163e-10	AT1G23400	--	GO:0000373,Group II intron splicing; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:1990904,ribonucleoprotein complex;	--	NP_173754.2 RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]	156	165	151	107
AT5G51180	down	-4.025879642662801	5.815352145794851e-12	8.70592424179288e-10	AT5G51180	--	GO:0003674,molecular_function; GO:0044255,cellular lipid metabolic process;	--	NP_568754.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	60	110	53	49
AT4G00170	down	-4.246497332891658	1.0743908246582236e-11	1.4391182361869363e-9	AT4G00170	--	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0016020,membrane; GO:0061817,endoplasmic reticulum-plasma membrane tethering; GO:0090158,endoplasmic reticulum membrane organization;	--	NP_567153.1 Plant VAMP (vesicle-associated membrane protein) family protein [Arabidopsis thaliana]	47	69	28	43
AT1G49140	down	-3.2956451852895396	3.1232702415863063e-11	3.9743613824185755e-9	AT1G49140	--	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0009853,photorespiration; GO:0016020,membrane; GO:0031966,mitochondrial membrane; GO:0045271,respiratory chain complex I; GO:0070469,respirasome;	NDUFB10; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10; K03966;	NP_001321329.1 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6) [Arabidopsis thaliana]	74	92	43	48
AT3G23490	up	3.3935799704266536	2.1983926507420022e-10	2.5431405891538164e-8	AT3G23490	--	GO:0003677,DNA binding; GO:0005829,cytosol; GO:0008824,cyanate hydratase activity; GO:0009439,cyanate metabolic process; GO:0009440,cyanate catabolic process; GO:0009651,response to salt stress; GO:0016020,membrane; GO:0016829,lyase activity; GO:0042802,identical protein binding;	cynS; cyanate lyase [EC:4.2.1.104]; K01725;	NP_001327887.1 cyanase [Arabidopsis thaliana]	107	133	126	62
AT4G04460	down	-1.613485993275555	1.9854798412751582e-9	2.105435915018866e-7	AT4G04460	--	GO:0004190,aspartic-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0006629,lipid metabolic process; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0046686,response to cadmium ion;	--	NP_001190671.1 Saposin-like aspartyl protease family protein [Arabidopsis thaliana]	4491	3947	1687	1234
AT2G17880	down	-1.7506641124267484	5.7774341579468065e-9	5.881427972789848e-7	AT2G17880	--	GO:0009507,chloroplast;	--	NP_179378.1 Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]	467	412	211	157
AT2G21340	down	-2.345786140128063	6.6715779747437105e-9	6.530448440662593e-7	AT2G21340	--	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0015297,antiporter activity; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0042908,xenobiotic transport; GO:0042910,xenobiotic transmembrane transporter activity; GO:0055085,transmembrane transport;	--	NP_565509.4 MATE efflux family protein [Arabidopsis thaliana]	127	115	83	49
AT4G26300	down	-1.5674582492241382	8.71751672457817e-9	8.217066690389423e-7	AT4G26300	--	GO:0000166,nucleotide binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004814,arginine-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006420,arginyl-tRNA aminoacylation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0016874,ligase activity; GO:0048608,reproductive structure development;	RARS, argS; arginyl-tRNA synthetase [EC:6.1.1.19]; K01887;	NP_194360.1 Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]	424	301	343	330
AT4G34560	down	-10.104440060478137	1.1269205299716081e-8	1.0242902674206222e-6	AT4G34560	--	GO:0016020,membrane;	--	NP_195182.2 transmembrane protein [Arabidopsis thaliana]	18	21	3	7
AT3G61070	down	-1.7750478161534264	1.513234122288891e-8	1.3279933935259406e-6	AT3G61070	--	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0005777,peroxisome; GO:0005778,peroxisomal membrane; GO:0005779,integral component of peroxisomal membrane; GO:0005829,cytosol; GO:0007031,peroxisome organization; GO:0007623,circadian rhythm; GO:0016020,membrane; GO:0016559,peroxisome fission; GO:0042802,identical protein binding; GO:0044375,regulation of peroxisome size;	--	NP_001078322.1 peroxin 11E [Arabidopsis thaliana]	180	235	147	107
AT3G46640	up	2.2195213436220804	4.4549617771611895e-8	3.657379910604912e-6	AT3G46640	G2-like	GO:0000122,negative regulation of transcription by RNA polymerase II; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0005667,transcription regulator complex; GO:0006355,regulation of DNA-templated transcription; GO:0007623,circadian rhythm; GO:0010468,regulation of gene expression; GO:0042752,regulation of circadian rhythm; GO:0042753,positive regulation of circadian rhythm; GO:0048511,rhythmic process;	--	NP_001030823.1 Homeodomain-like superfamily protein [Arabidopsis thaliana]	160	147	127	110
AT3G15040	up	3.8965326936121087	7.717224234692991e-8	6.13760489915427e-6	AT3G15040	--	GO:0005737,cytoplasm; GO:0009737,response to abscisic acid; GO:0009751,response to salicylic acid; GO:0010150,leaf senescence;	--	KAG7625290.1 Senescence regulator S40 [Arabidopsis thaliana x Arabidopsis arenosa]	130	95	103	59
AT3G20300	up	5.131013766203324	1.0963985448199999e-7	8.20686557813794e-6	AT3G20300	--	GO:0003674,molecular_function; GO:0016020,membrane;	--	NP_566658.1 extracellular ligand-gated ion channel protein (DUF3537) [Arabidopsis thaliana]	29	19	25	20
AT2G42690	down	-1.5385959047909843	1.2040760227156402e-7	8.755352793746584e-6	AT2G42690	--	GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0008970,phospholipase A1 activity; GO:0009650,UV protection; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0071493,cellular response to UV-B;	--	NP_181797.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	285	217	146	94
AT5G46280	up	2.9837984741192685	2.3406391063046194e-7	1.65470181265146e-5	AT5G46280	--	GO:0000166,nucleotide binding; GO:0000347,THO complex; GO:0000727,double-strand break repair via break-induced replication; GO:0000785,chromatin; GO:0003677,DNA binding; GO:0003678,DNA helicase activity; GO:0003697,single-stranded DNA binding; GO:0004386,helicase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006260,DNA replication; GO:0006268,DNA unwinding involved in DNA replication; GO:0006270,DNA replication initiation; GO:0006271,DNA strand elongation involved in DNA replication; GO:0007049,cell cycle; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0017116,single-stranded DNA helicase activity; GO:0032508,DNA duplex unwinding; GO:0042555,MCM complex; GO:1902975,mitotic DNA replication initiation;	MCM3; DNA replication licensing factor MCM3 [EC:3.6.4.12]; K02541;	NP_199440.1 Minichromosome maintenance (MCM2/3/5) family protein [Arabidopsis thaliana]	342	297	223	111
AT5G16930	up	2.502042628765514	2.569100486741609e-7	1.7671245239884848e-5	AT5G16930	--	GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0007005,mitochondrion organization; GO:0016887,ATP hydrolysis activity;	--	NP_197195.2 AAA-type ATPase family protein [Arabidopsis thaliana]	68	65	79	67
AT2G19680	down	-2.5994639824678956	4.040863134673702e-7	2.636922225062711e-5	AT2G19680	--	GO:0000276,mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); GO:0005739,mitochondrion; GO:0006811,ion transport; GO:0015078,proton transmembrane transporter activity; GO:0015986,proton motive force-driven ATP synthesis; GO:0016020,membrane; GO:0045263,proton-transporting ATP synthase complex, coupling factor F(o); GO:1902600,proton transmembrane transport;	ATPeFG, ATP5L, ATP20; F-type H+-transporting ATPase subunit g; K02140;	NP_001077919.1 Mitochondrial ATP synthase subunit G protein [Arabidopsis thaliana]	72	72	38	31
AT2G31890	down	-2.2916366562441395	4.330880963522914e-7	2.7555230130414534e-5	AT2G31890	--	GO:0000963,mitochondrial RNA processing; GO:0003723,RNA binding; GO:0005759,mitochondrial matrix; GO:0006364,rRNA processing; GO:0006952,defense response; GO:0009507,chloroplast; GO:0009536,plastid; GO:0035770,ribonucleoprotein granule; GO:0042644,chloroplast nucleoid; GO:0042646,plastid nucleoid; GO:0044528,regulation of mitochondrial mRNA stability; GO:1901259,chloroplast rRNA processing;	--	NP_850176.1 RAP [Arabidopsis thaliana]	99	96	43	39
AT5G51950	down	-1.8876464379039204	4.777305452797408e-7	2.9654249700900986e-5	AT5G51950	--	GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0050660,flavin adenine dinucleotide binding;	--	NP_200008.1 Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]	1055	852	459	318
AT2G47980	down	-1.8159124500695376	5.050455464530641e-7	3.0603355136263054e-5	AT2G47980	--	GO:0000278,mitotic cell cycle; GO:0000785,chromatin; GO:0003682,chromatin binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0007049,cell cycle; GO:0007059,chromosome segregation; GO:0007062,sister chromatid cohesion; GO:0008278,cohesin complex; GO:0051301,cell division; GO:0051455,monopolar spindle attachment to meiosis I kinetochore; GO:0051754,meiotic sister chromatid cohesion, centromeric;	STAG1_2, SCC3, IRR1; cohesin complex subunit SA-1/2; K06671;	NP_566119.1 sister-chromatid cohesion protein 3 [Arabidopsis thaliana]	401	360	304	193
AT3G56960	down	-4.110845597044916	7.759567607377912e-7	4.592581293203904e-5	AT3G56960	--	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006897,endocytosis; GO:0007164,establishment of tissue polarity; GO:0009827,plant-type cell wall modification; GO:0009846,pollen germination; GO:0009860,pollen tube growth; GO:0010118,stomatal movement; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016307,phosphatidylinositol phosphate kinase activity; GO:0016308,1-phosphatidylinositol-4-phosphate 5-kinase activity; GO:0016310,phosphorylation; GO:0016324,apical plasma membrane; GO:0016740,transferase activity; GO:0044238,primary metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0046854,phosphatidylinositol phosphate biosynthetic process; GO:0071704,organic substance metabolic process; GO:0090406,pollen tube;	PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]; K00889;	KAG7634709.1 Phosphatidylinositol-4-phosphate 5-kinase core [Arabidopsis suecica]	36	38	9	22
AT3G13060	down	-1.7487597140783446	9.662913520128905e-7	5.589117024710923e-5	AT3G13060	--	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005737,cytoplasm; GO:0061157,mRNA destabilization;	--	NP_001327857.1 evolutionarily conserved C-terminal region 5 [Arabidopsis thaliana]	149	136	78	70
AT5G40440	up	1.7339914183674896	1.1433386134815e-6	6.466215047356484e-5	AT5G40440	--	GO:0000165,MAPK cascade; GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004707,MAP kinase activity; GO:0004708,MAP kinase kinase activity; GO:0004713,protein tyrosine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006468,protein phosphorylation; GO:0006952,defense response; GO:0009611,response to wounding; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009864,induced systemic resistance, jasmonic acid mediated signaling pathway; GO:0009866,induced systemic resistance, ethylene mediated signaling pathway; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018108,peptidyl-tyrosine phosphorylation; GO:0080027,response to herbivore; GO:0098542,defense response to other organism; GO:0106310,protein serine kinase activity; GO:0110165,cellular anatomical entity;	MKK3; mitogen-activated protein kinase kinase 3 [EC:2.7.12.2]; K20607;	NP_001332250.1 mitogen-activated protein kinase kinase 3 [Arabidopsis thaliana]	163	127	86	101
AT3G16250	up	2.016329358387927	1.2712165016586382e-6	7.033143471133118e-5	AT3G16250	--	GO:0005829,cytosol; GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009773,photosynthetic electron transport in photosystem I; GO:0010598,NAD(P)H dehydrogenase complex (plastoquinone); GO:0016020,membrane; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0140647,P450-containing electron transport chain;	--	NP_188246.1 NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]	84	89	102	82
AT2G25800	down	-2.464512059171372	1.966728056475928e-6	1.0427756049440076e-4	AT2G25800	--	GO:0003674,molecular_function; GO:0003746,translation elongation factor activity; GO:0006414,translational elongation;	--	NP_180151.3 elongation factor Ts (DUF810) [Arabidopsis thaliana]	341	304	197	138
AT2G37230	up	2.583575127830372	2.2212776301034144e-6	1.1359760300634613e-4	AT2G37230	--	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0009409,response to cold; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane;	--	NP_181260.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]	421	352	321	297
AT3G03910	down	-2.6174677483413276	2.231780019771044e-6	1.1359760300634613e-4	AT3G03910	--	GO:0000166,nucleotide binding; GO:0004352,glutamate dehydrogenase (NAD+) activity; GO:0004353,glutamate dehydrogenase [NAD(P)+] activity; GO:0004354,glutamate dehydrogenase (NADP+) activity; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006520,cellular amino acid metabolic process; GO:0006538,glutamate catabolic process; GO:0016491,oxidoreductase activity; GO:0016639,oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor; GO:0051171,regulation of nitrogen compound metabolic process;	GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]; K00261;	NP_187041.1 glutamate dehydrogenase 3 [Arabidopsis thaliana]	59	70	51	23
AT1G54040	up	3.0545304879011166	2.6147069311608935e-6	1.304790027412642e-4	AT1G54040	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009753,response to jasmonic acid; GO:0010150,leaf senescence; GO:0019762,glucosinolate catabolic process; GO:0030234,enzyme regulator activity; GO:0042742,defense response to bacterium; GO:0050790,regulation of catalytic activity; GO:0080028,nitrile biosynthetic process;	--	NP_175806.3 epithiospecifier protein [Arabidopsis thaliana]	30	43	86	45
AT5G58060	down	-1.7710417117548074	2.9694040797499206e-6	1.453294881339144e-4	AT5G58060	--	GO:0000149,SNARE binding; GO:0005484,SNAP receptor activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0006906,vesicle fusion; GO:0009536,plastid; GO:0015031,protein transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016192,vesicle-mediated transport; GO:0031201,SNARE complex; GO:0031982,vesicle;	YKT6; synaptobrevin homolog YKT6; K08516;	NP_001154785.1 SNARE-like superfamily protein [Arabidopsis thaliana]	142	151	64	67
AT1G71440	down	-2.105371705724718	3.106645938559153e-6	1.4917762101194425e-4	AT1G71440	--	GO:0000226,microtubule cytoskeleton organization; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006457,protein folding; GO:0007021,tubulin complex assembly; GO:0007023,post-chaperonin tubulin folding pathway; GO:0009507,chloroplast; GO:0009793,embryo development ending in seed dormancy; GO:0043014,alpha-tubulin binding;	--	NP_565017.1 tubulin folding cofactor E / Pfifferling (PFI) [Arabidopsis thaliana]	121	90	70	43
AT1G74540	down	-1.7752532295581025	4.461651320085631e-6	2.102759742521839e-4	AT1G74540	--	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008216,spermidine metabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0072532,tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0072547,tricoumaroylspermidine meta-hydroxylase activity; GO:0072548,dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity; GO:0072549,monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity; GO:0072550,triferuloylspermidine meta-hydroxylase activity; GO:0072551,diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0072552,monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0080088,spermidine hydroxycinnamate conjugate biosynthetic process;	CYP98A8; cytochrome P450 family 98 subfamily A polypeptide 8 [EC:1.14.13.-]; K15506;	NP_177594.1 cytochrome P450, family 98, subfamily A, polypeptide 8 [Arabidopsis thaliana]	717	530	226	187
AT2G23120	down	-2.4495272800676355	4.629627984221018e-6	2.1422551308804532e-4	AT2G23120	--	GO:0005773,vacuole; GO:0005829,cytosol;	--	NP_565548.1 Late embryogenesis abundant protein, group 6 [Arabidopsis thaliana]	280	274	140	101
AT2G32280	up	3.2406316888103746	5.177508886015669e-6	2.352992877662478e-4	AT2G32280	--	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0009855,determination of bilateral symmetry; GO:0010087,phloem or xylem histogenesis; GO:0010252,auxin homeostasis; GO:0010305,leaf vascular tissue pattern formation; GO:0010588,cotyledon vascular tissue pattern formation; GO:0016020,membrane; GO:0048366,leaf development; GO:0048825,cotyledon development; GO:0051302,regulation of cell division;	--	NP_001323429.1 GPI inositol-deacylase C, putative (DUF1218) [Arabidopsis thaliana]	43	25	22	26
AT1G62750	down	-1.633795236084378	6.184520425115844e-6	2.7613341196350565e-4	AT1G62750	--	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003746,translation elongation factor activity; GO:0003924,GTPase activity; GO:0005524,ATP binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006414,translational elongation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009658,chloroplast organization; GO:0009791,post-embryonic development; GO:0009845,seed germination; GO:0009941,chloroplast envelope; GO:0032543,mitochondrial translation; GO:0032790,ribosome disassembly; GO:0048046,apoplast;	--	NP_564801.1 Translation elongation factor EFG/EF2 protein [Arabidopsis thaliana]	1386	1261	561	482
AT1G15240	down	-2.029168787871275	6.7528762138453425e-6	2.963115511075241e-4	AT1G15240	--	GO:0005768,endosome; GO:0016020,membrane; GO:0035091,phosphatidylinositol binding;	SNX13; sorting nexin-13; K17925;	NP_001319008.1 phox (PX) domain-containing protein [Arabidopsis thaliana]	88	91	49	61
AT1G77122	down	-3.2474908772050153	8.652079852400245e-6	3.732125970230275e-4	AT1G77122	--	GO:0008150,biological_process;	--	NP_849898.1 Uncharacterized protein family UPF0090 [Arabidopsis thaliana]	62	48	21	39
AT4G26600	up	2.3648265096381618	9.15369362218126e-6	3.8826917114085513e-4	AT4G26600	--	GO:0000470,maturation of LSU-rRNA; GO:0001510,RNA methylation; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009383,rRNA (cytosine-C5-)-methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042254,ribosome biogenesis; GO:0070475,rRNA base methylation;	--	NP_001328282.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	84	79	122	84
AT2G16660	up	2.7562459841981912	1.1290455622036114e-5	4.560985644139986e-4	AT2G16660	--	GO:0016020,membrane;	--	NP_179257.1 Major facilitator superfamily protein [Arabidopsis thaliana]	564	469	715	527
AT5G51550	down	-1.8021680975684489	1.236780991688352e-5	4.8424732674567017e-4	AT5G51550	--	GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0008150,biological_process; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0048046,apoplast;	--	NP_199968.1 EXORDIUM like 3 [Arabidopsis thaliana]	542	452	259	191
AT1G80760	down	-2.789830710807154	1.2909741055045896e-5	4.978074391680577e-4	AT1G80760	--	GO:0005886,plasma membrane; GO:0015168,glycerol transmembrane transporter activity; GO:0015204,urea transmembrane transporter activity; GO:0015267,channel activity; GO:0015793,glycerol transmembrane transport; GO:0016020,membrane; GO:0035445,borate transmembrane transport; GO:0046713,borate transport; GO:0046715,active borate transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0071918,urea transmembrane transport; GO:0080029,cellular response to boron-containing substance levels;	--	NP_178191.1 NOD26-like intrinsic protein 6;1 [Arabidopsis thaliana]	62	48	32	13
AT1G06670	up	3.043418950378392	1.3358453911176024e-5	5.062026542016215e-4	AT1G06670	--	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003678,DNA helicase activity; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006259,DNA metabolic process; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0032508,DNA duplex unwinding;	DHX36, RHAU; ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]; K14442;	NP_172152.1 nuclear DEIH-boxhelicase [Arabidopsis thaliana]	305	300	275	252
AT1G21640	down	-1.9536507703213863	1.3525257558235856e-5	5.062026542016215e-4	AT1G21640	--	GO:0000166,nucleotide binding; GO:0003951,NAD+ kinase activity; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0006741,NADP biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019674,NAD metabolic process;	ppnK, NADK; NAD+ kinase [EC:2.7.1.23]; K00858;	NP_001185057.1 NAD kinase 2 [Arabidopsis thaliana]	150	120	58	57
AT2G04380	up	1.5880268756958014	1.9361935196624097e-5	7.039446439344046e-4	AT2G04380	--	GO:0008150,biological_process;	--	NP_178519.1 hypothetical protein AT2G04380 [Arabidopsis thaliana]	73	44	184	108
AT1G50900	down	-1.653482048201078	2.298946521104943e-5	8.126137355850111e-4	AT1G50900	--	GO:0005515,protein binding; GO:0006886,intracellular protein transport; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0015031,protein transport; GO:0016020,membrane; GO:0090391,granum assembly;	--	NP_564580.1 Ankyrin repeat family protein [Arabidopsis thaliana]	206	149	79	52
AT3G63450	up	2.5223412902391473	2.6823607606731317e-5	9.351517994401534e-4	AT3G63450	--	GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding;	--	NP_001190170.1 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]	38	38	35	33
AT3G11810	up	3.946383345141392	2.7811646732013133e-5	9.56495147742884e-4	AT3G11810	--	GO:0016020,membrane;	--	NP_187787.1 transmembrane protein [Arabidopsis thaliana]	59	25	33	31
AT5G43130	up	2.042507685607063	3.077388503291876e-5	0.0010341460712745	AT5G43130	--	GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005667,transcription regulator complex; GO:0005669,transcription factor TFIID complex; GO:0006352,DNA-templated transcription initiation; GO:0006367,transcription initiation at RNA polymerase II promoter; GO:0016251,RNA polymerase II general transcription initiation factor activity; GO:0046982,protein heterodimerization activity;	TAF4; transcription initiation factor TFIID subunit 4; K03129;	NP_199127.3 TBP-associated factor 4 [Arabidopsis thaliana]	114	88	109	83
AT5G08400	up	2.0088641408680816	3.088216165692039e-5	0.0010341460712745	AT5G08400	--	GO:0005575,cellular_component; GO:0008150,biological_process;	--	NP_001031856.1 structural maintenance of chromosomes-like protein, putative (DUF3531) [Arabidopsis thaliana]	35	47	81	61
AT1G65590	down	-2.398340421693644	3.502502858357336e-5	0.00115764542526226	AT1G65590	--	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004563,beta-N-acetylhexosaminidase activity; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0015929,hexosaminidase activity; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0030203,glycosaminoglycan metabolic process; GO:0102148,N-acetyl-beta-D-galactosaminidase activity;	HEXA_B; hexosaminidase [EC:3.2.1.52]; K12373;	NP_176737.2 beta-hexosaminidase 3 [Arabidopsis thaliana]	133	162	116	46
AT5G01180	down	-2.2487590620310485	4.9342917262184945e-5	0.00159554539167683	AT5G01180	--	GO:0005886,plasma membrane; GO:0006857,oligopeptide transport; GO:0009860,pollen tube growth; GO:0015031,protein transport; GO:0015833,peptide transport; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0035442,dipeptide transmembrane transport; GO:0042937,tripeptide transmembrane transporter activity; GO:0042938,dipeptide transport; GO:0042939,tripeptide transport; GO:0055085,transmembrane transport; GO:0071916,dipeptide transmembrane transporter activity;	--	NP_001331271.1 peptide transporter 5 [Arabidopsis thaliana]	70	77	25	43
AT3G14210	up	3.0086491580288524	5.449093373035253e-5	0.00172466019615371	AT3G14210	--	GO:0000325,plant-type vacuole; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009625,response to insect; GO:0009941,chloroplast envelope; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0019762,glucosinolate catabolic process; GO:0022626,cytosolic ribosome; GO:0048046,apoplast; GO:0099503,secretory vesicle;	--	NP_188037.1 GDSL-like lipase/acylhydrolase superfamily protein [Arabidopsis thaliana]	536	601	1877	1333
AT5G63890	down	-2.245244304072168	6.06339782028645e-5	0.00185919848826855	AT5G63890	--	GO:0000105,histidine biosynthetic process; GO:0004399,histidinol dehydrogenase activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008652,cellular amino acid biosynthetic process; GO:0009411,response to UV; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009555,pollen development; GO:0009570,chloroplast stroma; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0046872,metal ion binding; GO:0051287,NAD binding;	hisD; histidinol dehydrogenase [EC:1.1.1.23]; K00013;	NP_568981.2 histidinol dehydrogenase [Arabidopsis thaliana]	167	165	175	137
AT4G22530	down	-2.0477455423485926	6.29234387257973e-5	0.0019064303756804	AT4G22530	--	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process;	--	NP_001329270.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	68	66	50	28
AT4G21810	down	-2.1697138172911754	6.805726169348221e-5	0.00201402012802223	AT4G21810	--	GO:0000839,Hrd1p ubiquitin ligase ERAD-L complex; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006950,response to stress; GO:0016020,membrane; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0051787,misfolded protein binding; GO:1990381,ubiquitin-specific protease binding;	DERL2_3; Derlin-2/3; K13989;	NP_193912.3 DERLIN-2.1 [Arabidopsis thaliana]	91	117	55	19
AT1G08460	up	2.0659285466360764	6.913574446346083e-5	0.00202241919148859	AT1G08460	--	GO:0004407,histone deacetylase activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006325,chromatin organization; GO:0008270,zinc ion binding; GO:0016020,membrane; GO:0016570,histone modification; GO:0016787,hydrolase activity; GO:0046872,metal ion binding;	--	NP_001320319.1 histone deacetylase 8 [Arabidopsis thaliana]	86	65	62	43
AT2G46225	down	-1.6518378382324237	7.154095337769142e-5	0.00206555372145888	AT2G46225	--	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0010090,trichome morphogenesis; GO:0031209,SCAR complex; GO:0045010,actin nucleation; GO:0110165,cellular anatomical entity;	--	NP_001189756.1 ABI-1-like 1 [Arabidopsis thaliana]	98	126	82	67
AT5G67490	up	1.9510386897496907	7.223350931624384e-5	0.00206555372145888	AT5G67490	--	GO:0005739,mitochondrion; GO:0006099,tricarboxylic acid cycle; GO:0034553,mitochondrial respiratory chain complex II assembly;	--	NP_569049.1 succinate dehydrogenase assembly factor [Arabidopsis thaliana]	686	603	447	426
AT4G35420	down	-2.3841952250721157	8.895197586027705e-5	0.00248772284136708	AT4G35420	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0009555,pollen development; GO:0010584,pollen exine formation; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0048316,seed development; GO:0080110,sporopollenin biosynthetic process;	--	NP_195268.2 dihydroflavonol 4-reductase-like1 [Arabidopsis thaliana]	199	221	62	43
AT5G58640	down	-1.526736570212179	9.594232626431955e-5	0.00262551849830853	AT5G58640	--	GO:0004791,thioredoxin-disulfide reductase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0045454,cell redox homeostasis; GO:0098869,cellular oxidant detoxification;	SELENOT; thioredoxin reductase-like selenoprotein T; K22366;	NP_200672.1 Selenoprotein, Rdx type [Arabidopsis thaliana]	153	101	78	69
AT2G38780	down	-3.364246057343518	9.703624876531934e-5	0.00262720482029508	AT2G38780	--	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0016020,membrane;	--	NP_001324243.1 cytochrome C oxidase subunit [Arabidopsis thaliana]	45	27	12	6
AT5G22650	down	-2.013719038356431	1.1345447288753736e-4	0.00297671787112147	AT5G22650	--	GO:0000325,plant-type vacuole; GO:0004407,histone deacetylase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005739,mitochondrion; GO:0006325,chromatin organization; GO:0009294,DNA-mediated transformation; GO:0009505,plant-type cell wall; GO:0009536,plastid; GO:0009944,polarity specification of adaxial/abaxial axis; GO:0010162,seed dormancy process; GO:0016570,histone modification; GO:0016787,hydrolase activity; GO:0045892,negative regulation of DNA-templated transcription; GO:0048364,root development;	--	NP_851056.1 histone deacetylase 2B [Arabidopsis thaliana]	1079	962	849	696
AT3G20790	down	-1.839168163470336	1.494462327152146e-4	0.00384182487131536	AT3G20790	--	GO:0000166,nucleotide binding; GO:0006740,NADPH regeneration; GO:0016491,oxidoreductase activity;	--	NP_188715.2 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]	357	556	152	158
AT2G40770	down	-2.07526093779883	1.77333322380575e-4	0.00446844856889666	AT2G40770	--	GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005575,cellular_component; GO:0006338,chromatin remodeling; GO:0008150,biological_process; GO:0046872,metal ion binding; GO:0140658,ATP-dependent chromatin remodeler activity;	--	NP_001318395.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]	84	60	29	19
AT5G04770	down	-2.3478805523344795	1.852801303607919e-4	0.00457803817250694	AT5G04770	--	GO:0003333,amino acid transmembrane transport; GO:0005886,plasma membrane; GO:0006865,amino acid transport; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009624,response to nematode; GO:0015171,amino acid transmembrane transporter activity; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0031969,chloroplast membrane; GO:0055085,transmembrane transport;	--	NP_196097.1 cationic amino acid transporter 6 [Arabidopsis thaliana]	101	75	35	41
AT4G37260	up	1.867918561265146	1.9919839688050487e-4	0.00487461461597004	AT4G37260	MYB	GO:0000976,transcription cis-regulatory region binding; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0010929,positive regulation of auxin mediated signaling pathway; GO:0019760,glucosinolate metabolic process; GO:1901001,negative regulation of response to salt stress;	--	NP_195443.1 myb domain protein 73 [Arabidopsis thaliana]	223	230	194	151
AT2G25280	down	-1.7542933731595145	2.105340637862824e-4	0.00510294468891513	AT2G25280	--	--	--	NP_565590.1 AmmeMemoRadiSam system protein B [Arabidopsis thaliana]	187	145	78	30
AT5G02820	up	2.408682768887738	2.1578131557110436e-4	0.00518078724649491	AT5G02820	--	GO:0000166,nucleotide binding; GO:0000228,nuclear chromosome; GO:0000287,magnesium ion binding; GO:0000706,meiotic DNA double-strand break processing; GO:0003677,DNA binding; GO:0003824,catalytic activity; GO:0003916,DNA topoisomerase activity; GO:0003918,DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0006259,DNA metabolic process; GO:0006265,DNA topological change; GO:0007131,reciprocal meiotic recombination; GO:0009330,DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex; GO:0009957,epidermal cell fate specification; GO:0016853,isomerase activity; GO:0042138,meiotic DNA double-strand break formation; GO:0042802,identical protein binding; GO:0046872,metal ion binding;	SPO11; meiotic recombination protein SPO11; K10878;	NP_195902.1 Spo11/DNA topoisomerase VI, subunit A protein [Arabidopsis thaliana]	55	39	40	25
AT5G10790	up	2.8995625087837213	2.247610547475648e-4	0.00529849954520683	AT5G10790	--	GO:0004843,cysteine-type deubiquitinase activity; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0008270,zinc ion binding; GO:0016579,protein deubiquitination; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; GO:0070461,SAGA-type complex;	--	NP_001332186.1 ubiquitin-specific protease 22 [Arabidopsis thaliana]	15	42	35	18
AT5G41860	up	1.57055685851633	2.2484791783196017e-4	0.00529849954520683	AT5G41860	--	GO:0005575,cellular_component; GO:0016020,membrane;	--	NP_199001.1 transmembrane protein [Arabidopsis thaliana]	66	50	81	80
AT1G22850	down	-2.0706720751318075	2.972877109037259e-4	0.00675533235937484	AT1G22850	--	GO:0003674,molecular_function; GO:0009507,chloroplast; GO:0016020,membrane;	--	VYS46932.1 unnamed protein product [Arabidopsis thaliana]	78	57	43	21
AT1G02110	up	1.7271911562758149	3.474828645953345e-4	0.0078260521273905	AT1G02110	--	--	--	NP_171713.2 bZIP domain class transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]	96	52	84	61
AT3G46620	up	2.2615849324079136	3.57789376142402e-4	0.00798749089721415	AT3G46620	--	GO:0004842,ubiquitin-protein transferase activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0009414,response to water deprivation; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0051865,protein autoubiquitination; GO:0061630,ubiquitin protein ligase activity;	--	NP_190246.1 zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]	109	80	85	74
AT1G78000	down	-2.0829252198800887	3.7089035968896006e-4	0.0081372065983483	AT1G78000	--	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0008271,secondary active sulfate transmembrane transporter activity; GO:0008272,sulfate transport; GO:0009970,cellular response to sulfate starvation; GO:0015116,sulfate transmembrane transporter activity; GO:0015293,symporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:1902358,sulfate transmembrane transport;	--	NP_001321366.1 sulfate transporter 1;2 [Arabidopsis thaliana]	47	47	30	31
AT3G10130	down	-2.219177024891966	3.8401031434803535e-4	0.00821265756315756	AT3G10130	--	GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0010287,plastoglobule; GO:0020037,heme binding; GO:0110165,cellular anatomical entity;	--	NP_187624.1 SOUL heme-binding family protein [Arabidopsis thaliana]	55	44	21	24
AT1G07050	up	2.8916788836350733	4.029041406534829e-4	0.00854492531635928	AT1G07050	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription;	--	NP_001320785.1 CCT motif family protein [Arabidopsis thaliana]	47	51	77	52
AT4G02130	up	2.014262310077811	4.346646340619049e-4	0.00914232639411196	AT4G02130	--	GO:0000139,Golgi membrane; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0045489,pectin biosynthetic process; GO:0047262,polygalacturonate 4-alpha-galacturonosyltransferase activity; GO:0071555,cell wall organization;	--	NP_001031573.1 galacturonosyltransferase 6 [Arabidopsis thaliana]	90	99	67	65
AT1G78040	down	-1.8093529241762285	4.3862633220152834e-4	0.00915003291354827	AT1G78040	--	GO:0005515,protein binding;	--	NP_001077838.1 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]	3616	3591	1995	1640
AT2G31560	down	-2.120875755168372	4.6587430108754424e-4	0.00963943167697398	AT2G31560	--	--	--	NP_001325346.1 signal transducer/transcription protein, putative (DUF1685) [Arabidopsis thaliana]	87	71	60	28
AT3G32940	up	1.681737507566499	4.746008342013199e-4	0.00974079937937386	AT3G32940	--	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0048024,regulation of mRNA splicing, via spliceosome;	--	NP_189783.2 RNA-binding KH domain-containing protein [Arabidopsis thaliana]	64	59	79	56
AT3G62720	up	1.9406507426209672	5.02348937154478e-4	0.01014665115125513	AT3G62720	--	GO:0000139,Golgi membrane; GO:0000271,polysaccharide biosynthetic process; GO:0005515,protein binding; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0005829,cytosol; GO:0006486,protein glycosylation; GO:0009969,xyloglucan biosynthetic process; GO:0010411,xyloglucan metabolic process; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0033843,xyloglucan 6-xylosyltransferase activity; GO:0035252,UDP-xylosyltransferase activity; GO:0046872,metal ion binding;	--	NP_001030917.1 xylosyltransferase 1 [Arabidopsis thaliana]	132	146	122	110
AT3G05750	up	2.386756475821361	5.711937235105268e-4	0.01135693770573664	AT3G05750	--	GO:0000132,establishment of mitotic spindle orientation; GO:0000913,preprophase band assembly; GO:0009574,preprophase band;	--	NP_187226.2 serine-rich adhesin for platelets-like protein [Arabidopsis thaliana]	48	37	44	31
AT3G10180	up	2.6946568626586433	6.033101192112326e-4	0.01190251359219059	AT3G10180	--	GO:0000166,nucleotide binding; GO:0003774,cytoskeletal motor activity; GO:0003777,microtubule motor activity; GO:0005524,ATP binding; GO:0005874,microtubule; GO:0007018,microtubule-based movement; GO:0008017,microtubule binding; GO:0016787,hydrolase activity;	--	NP_187629.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]	62	39	46	24
AT3G61540	up	3.2555399105397953	6.233942150529419e-4	0.01220414059469028	AT3G61540	--	GO:0004177,aminopeptidase activity; GO:0005773,vacuole; GO:0005829,cytosol; GO:0006508,proteolysis; GO:0008233,peptidase activity;	--	NP_191713.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	84	92	88	67
AT1G76180	down	-1.631210346690799	6.303685479549907e-4	0.01224647293546146	AT1G76180	--	GO:0001786,phosphatidylserine binding; GO:0003729,mRNA binding; GO:0005509,calcium ion binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0008289,lipid binding; GO:0009269,response to desiccation; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009507,chloroplast; GO:0009631,cold acclimation; GO:0009737,response to abscisic acid; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0031210,phosphatidylcholine binding; GO:0044183,protein folding chaperone; GO:0046872,metal ion binding; GO:0050821,protein stabilization; GO:0051179,localization; GO:0090559,regulation of membrane permeability;	--	NP_001185408.1 Dehydrin family protein [Arabidopsis thaliana]	3966	3847	1910	1378
AT1G10500	down	-1.6890794116409076	6.568357919200472e-4	0.01256877511606406	AT1G10500	--	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016226,iron-sulfur cluster assembly; GO:0030674,protein-macromolecule adaptor activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding;	--	NP_172520.1 chloroplast-localized ISCA-like protein [Arabidopsis thaliana]	202	210	104	76
AT1G49780	down	-1.7302522185840743	7.051778320900387e-4	0.01332102623308809	AT1G49780	--	GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0061630,ubiquitin protein ligase activity; GO:0098542,defense response to other organism;	--	NP_175400.1 plant U-box 26 [Arabidopsis thaliana]	83	73	30	29
AT1G73970	down	-2.0970083430005904	7.27477611212514e-4	0.01361345970982241	AT1G73970	--	GO:0003674,molecular_function; GO:0008150,biological_process;	--	NP_177537.2 obscurin-like protein [Arabidopsis thaliana]	280	116	64	67
AT4G34670	down	-1.8700418089205613	7.554119561591411e-4	0.01403301772573003	AT4G34670	--	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex;	RP-S3Ae, RPS3A; small subunit ribosomal protein S3Ae; K02984;	NP_195193.1 Ribosomal protein S3Ae [Arabidopsis thaliana]	2426	2334	1723	1332
AT5G65990	down	-1.9908506356751765	7.623494903786746e-4	0.01405927139865019	AT5G65990	--	GO:0003333,amino acid transmembrane transport; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0006865,amino acid transport; GO:0015173,aromatic amino acid transmembrane transporter activity; GO:0015175,neutral amino acid transmembrane transporter activity; GO:0015179,L-amino acid transmembrane transporter activity; GO:0015801,aromatic amino acid transport; GO:0015804,neutral amino acid transport; GO:0015807,L-amino acid transport; GO:0016020,membrane; GO:1902475,L-alpha-amino acid transmembrane transport;	SLC36A, PAT; solute carrier family 36 (proton-coupled amino acid transporter); K14209;	NP_201400.1 Transmembrane amino acid transporter family protein [Arabidopsis thaliana]	162	175	93	75
AT4G15545	up	2.203738607164574	7.823501912314205e-4	0.01432432544376953	AT4G15545	--	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0010168,ER body; GO:0043621,protein self-association; GO:0080119,ER body organization;	--	NP_567470.1 PH-response transcription factor [Arabidopsis thaliana]	49	52	45	17
AT5G18748	up	2.69843158185495	8.300921256419005e-4	0.01508988899827597	AT5G18748	--	GO:0003674,molecular_function; GO:0008150,biological_process;	--	NP_001119250.1 hypothetical protein AT5G18748 [Arabidopsis thaliana]	12	5	30	36
AT5G64030	down	-1.8748231781730451	8.429585062528157e-4	0.0152151021164072	AT5G64030	--	GO:0000139,Golgi membrane; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0008168,methyltransferase activity; GO:0009536,plastid; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation;	--	NP_201208.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	910	769	425	302
AT3G15260	up	2.53194838781723	8.582708787887802e-4	0.0153823900458975	AT3G15260	--	GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0005829,cytosol; GO:0006470,protein dephosphorylation; GO:0016787,hydrolase activity; GO:0017018,myosin phosphatase activity; GO:0046872,metal ion binding;	--	NP_188144.1 Protein phosphatase 2C family protein [Arabidopsis thaliana]	36	56	47	19
AT3G54600	up	2.9452207766561855	0.00101473929444629	0.01793410766920711	AT3G54600	--	GO:0003674,molecular_function; GO:0005829,cytosol;	DJ1D; D-lactate dehydratase [EC:4.2.1.130]; K18881;	NP_191023.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]	74	69	69	66
AT3G27230	down	-1.923012223793613	0.00106833207865184	0.01862263794636261	AT3G27230	--	GO:0000138,Golgi trans cisterna; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0032259,methylation;	--	NP_566813.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	150	124	54	54
AT2G44850	down	-3.051466539856319	0.0011937184878125	0.01964072357684055	AT2G44850	--	GO:0005739,mitochondrion;	--	NP_182012.1 hypothetical protein AT2G44850 [Arabidopsis thaliana]	20	34	9	8
AT5G56120	down	-2.1895408882679765	0.00119619338090777	0.01964072357684055	AT5G56120	--	GO:0003674,molecular_function; GO:0003746,translation elongation factor activity; GO:0006414,translational elongation; GO:0008150,biological_process; GO:0016020,membrane;	--	NP_200423.2 RNA polymerase II elongation factor [Arabidopsis thaliana]	86	78	24	30
AT5G18170	down	-1.7451339031537474	0.00128049908374153	0.02083971532222701	AT5G18170	--	GO:0000166,nucleotide binding; GO:0004352,glutamate dehydrogenase (NAD+) activity; GO:0004353,glutamate dehydrogenase [NAD(P)+] activity; GO:0004354,glutamate dehydrogenase (NADP+) activity; GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0006520,cellular amino acid metabolic process; GO:0006538,glutamate catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008270,zinc ion binding; GO:0009536,plastid; GO:0009646,response to absence of light; GO:0016491,oxidoreductase activity; GO:0016639,oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor; GO:0050897,cobalt ion binding;	GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]; K00261;	NP_197318.1 glutamate dehydrogenase 1 [Arabidopsis thaliana]	137	107	76	43
AT5G37490	down	-5.777983088401985	0.00129378193356065	0.02083971532222701	AT5G37490	--	GO:0004842,ubiquitin-protein transferase activity; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0061630,ubiquitin protein ligase activity;	--	NP_198565.1 ARM repeat superfamily protein [Arabidopsis thaliana]	9	16	5	0
AT1G78180	down	-2.9719838671945755	0.00132309651398086	0.02117786558541703	AT1G78180	--	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0055085,transmembrane transport;	--	NP_565171.4 Mitochondrial substrate carrier family protein [Arabidopsis thaliana]	38	14	25	8
AT5G35360	down	-1.800566424201147	0.00169050787093753	0.02607480322143051	AT5G35360	--	GO:0000166,nucleotide binding; GO:0003989,acetyl-CoA carboxylase activity; GO:0004075,biotin carboxylase activity; GO:0005524,ATP binding; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016874,ligase activity; GO:0046872,metal ion binding; GO:2001295,malonyl-CoA biosynthetic process;	accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]; K01961;	NP_198386.1 acetyl Co-enzyme a carboxylase biotin carboxylase subunit [Arabidopsis thaliana]	1668	1583	1279	963
AT3G02560	up	1.8437456208673415	0.00172574598058254	0.02645797301555767	AT3G02560	--	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0006412,translation; GO:0009507,chloroplast; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0032040,small-subunit processome; GO:0042274,ribosomal small subunit biogenesis; GO:1990904,ribonucleoprotein complex;	RP-S7e, RPS7; small subunit ribosomal protein S7e; K02993;	NP_001319452.1 Ribosomal protein S7e family protein [Arabidopsis thaliana]	480	487	582	479
AT1G48100	down	-1.8219616601779416	0.00177934353495807	0.02710982770484794	AT1G48100	--	GO:0004650,polygalacturonase activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009831,plant-type cell wall modification involved in multidimensional cell growth; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0071555,cell wall organization;	--	NP_175244.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]	218	182	68	39
AT1G10850	down	-1.601305882095093	0.00179784323132732	0.02710982770484794	AT1G10850	--	GO:0004672,protein kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation;	--	NP_001077512.4 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]	79	96	50	21
AT5G40450	up	1.8800339302405664	0.00180022038590149	0.02710982770484794	AT5G40450	--	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0080171,lytic vacuole organization;	--	NP_001330812.1 A-kinase anchor-like protein [Arabidopsis thaliana]	722	609	619	503
AT2G46520	up	2.9391108597337876	0.00182889691494852	0.02737966263849404	AT2G46520	--	GO:0005049,nuclear export signal receptor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006606,protein import into nucleus; GO:0006611,protein export from nucleus; GO:0006886,intracellular protein transport; GO:0009506,plasmodesma; GO:0015031,protein transport; GO:0031267,small GTPase binding;	CSE1, CAS, XPO2; exportin-2 (importin alpha re-exporter); K18423;	NP_182175.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter [Arabidopsis thaliana]	423	403	303	320
AT3G21360	up	2.122837190915507	0.00187337027276647	0.02788144645725537	AT3G21360	--	GO:0005634,nucleus; GO:0005829,cytosol; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding;	--	NP_188773.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]	30	40	25	21
AT3G52230	up	1.9025901857954768	0.00191878086210938	0.02814112589495319	AT3G52230	--	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009707,chloroplast outer membrane; GO:0009941,chloroplast envelope;	--	NP_566963.1 hypothetical protein AT3G52230 [Arabidopsis thaliana]	207	145	241	182
AT2G22870	down	-1.8997438814778944	0.00193221820645885	0.02814112589495319	AT2G22870	--	GO:0000166,nucleotide binding; GO:0005525,GTP binding; GO:0046872,metal ion binding;	--	NP_565543.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]	29	43	51	26
AT1G14890	down	-1.52991868688928	0.00193938957121212	0.02814112589495319	AT1G14890	--	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity;	--	NP_563960.2 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]	107	143	77	49
AT3G18750	down	-2.3885751333263636	0.00194610536640933	0.02814112589495319	AT3G18750	--	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0035556,intracellular signal transduction; GO:0106310,protein serine kinase activity;	--	NP_001189928.1 with no lysine (K) kinase 6 [Arabidopsis thaliana]	37	33	11	21
AT3G59410	down	-2.033718324236064	0.00205579687690424	0.02920615926355047	AT3G59410	--	GO:0000049,tRNA binding; GO:0000166,nucleotide binding; GO:0003723,RNA binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004694,eukaryotic translation initiation factor 2alpha kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006417,regulation of translation; GO:0006468,protein phosphorylation; GO:0006521,regulation of cellular amino acid metabolic process; GO:0009635,response to herbicide; GO:0010998,regulation of translational initiation by eIF2 alpha phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018105,peptidyl-serine phosphorylation; GO:0034198,cellular response to amino acid starvation; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0070301,cellular response to hydrogen peroxide; GO:0072755,cellular response to benomyl; GO:0080090,regulation of primary metabolic process; GO:0106310,protein serine kinase activity; GO:1990451,cellular stress response to acidic pH;	EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1]; K16196;	NP_001326041.1 protein kinase family protein [Arabidopsis thaliana]	61	48	18	11
AT5G65460	up	1.7106776661645569	0.00207713745646469	0.02920615926355047	AT5G65460	--	GO:0000166,nucleotide binding; GO:0003774,cytoskeletal motor activity; GO:0003777,microtubule motor activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0005874,microtubule; GO:0005886,plasma membrane; GO:0007017,microtubule-based process; GO:0007018,microtubule-based movement; GO:0008017,microtubule binding; GO:0009903,chloroplast avoidance movement; GO:0009904,chloroplast accumulation movement; GO:0015630,microtubule cytoskeleton; GO:0016020,membrane; GO:0031022,nuclear migration along microfilament;	--	NP_001331384.1 kinesin like protein for actin based chloroplast movement 2 [Arabidopsis thaliana]	138	156	137	123
AT4G14540	up	1.5815894485111377	0.00224332741574632	0.0309795192548034	AT4G14540	NF-YB	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001228,DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009408,response to heat; GO:0009414,response to water deprivation; GO:0016602,CCAAT-binding factor complex; GO:0043565,sequence-specific DNA binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0046982,protein heterodimerization activity;	NFYB, HAP3; nuclear transcription Y subunit beta; K08065;	NP_193190.1 nuclear factor Y, subunit B3 [Arabidopsis thaliana]	94	97	140	79
AT2G35820	up	1.9321730016323508	0.00225194933679317	0.0309795192548034	AT2G35820	--	GO:0004848,ureidoglycolate hydrolase activity; GO:0005829,cytosol; GO:0016787,hydrolase activity;	--	NP_001325071.1 ureidoglycolate hydrolase [Arabidopsis thaliana]	50	33	24	34
AT5G19780	down	-3.2283035726538767	0.0022695633015898	0.03105397098143045	AT5G19780	--	GO:0000166,nucleotide binding; GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0005200,structural constituent of cytoskeleton; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0016787,hydrolase activity; GO:0046872,metal ion binding;	TUBA; tubulin alpha; K07374;	NP_197478.1 tubulin alpha-3 [Arabidopsis thaliana]	826	836	650	526
AT3G02910	up	1.5015948358631643	0.00228317597883103	0.03107317040708545	AT3G02910	--	GO:0005829,cytosol; GO:0008150,biological_process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0061929,gamma-glutamylaminecyclotransferase activity;	GGACT; gamma-glutamylaminecyclotransferase [EC:2.3.2.-]; K19761;	NP_566187.1 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana]	53	71	84	80
AT2G26440	down	-1.6517264226495243	0.00241359585573381	0.03267341198320506	AT2G26440	--	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0009617,response to bacterium; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; GO:0071555,cell wall organization;	--	NP_180212.1 Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]	390	340	238	154
AT4G17870	down	-1.7382155484118318	0.0025219759695875002	0.03366443877157381	AT4G17870	--	GO:0004864,protein phosphatase inhibitor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009705,plant-type vacuole membrane; GO:0009738,abscisic acid-activated signaling pathway; GO:0010427,abscisic acid binding; GO:0016020,membrane; GO:0038023,signaling receptor activity; GO:0042802,identical protein binding; GO:0042803,protein homodimerization activity; GO:0043086,negative regulation of catalytic activity; GO:0044389,ubiquitin-like protein ligase binding; GO:0062049,protein phosphatase inhibitor complex; GO:0080163,regulation of protein serine/threonine phosphatase activity; GO:1902584,positive regulation of response to water deprivation;	PYL; abscisic acid receptor PYR/PYL family; K14496;	NP_193521.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein [Arabidopsis thaliana]	69	89	53	21
AT5G13090	down	-2.1127794154406994	0.00276721188043815	0.03648991831976737	AT5G13090	--	--	--	KAG7602071.1 hypothetical protein ISN45_At05g011820 [Arabidopsis thaliana x Arabidopsis arenosa]	33	40	44	48
AT5G22300	down	-1.811017060026864	0.00297006017913938	0.03856532222402922	AT5G22300	--	GO:0000257,nitrilase activity; GO:0003824,catalytic activity; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006807,nitrogen compound metabolic process; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016829,lyase activity; GO:0016836,hydro-lyase activity; GO:0018822,nitrile hydratase activity; GO:0019499,cyanide metabolic process; GO:0047427,cyanoalanine nitrilase activity; GO:0047558,3-cyanoalanine hydratase activity; GO:0051410,detoxification of nitrogen compound; GO:0080061,indole-3-acetonitrile nitrilase activity;	NIT4; beta-cyano-L-alanine hydratase/nitrilase [EC:3.5.5.4 4.2.1.65]; K13035;	NP_001330785.1 nitrilase 4 [Arabidopsis thaliana]	74	79	15	40
AT5G56870	down	-1.6806075211087288	0.00332036541774055	0.04246396978969703	AT5G56870	--	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565,beta-galactosidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0048046,apoplast;	--	NP_200498.1 beta-galactosidase 4 [Arabidopsis thaliana]	1139	1081	663	528
AT4G19120	up	2.271144802424118	0.00353501259899932	0.04475923912663322	AT4G19120	--	GO:0000138,Golgi trans cisterna; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation;	--	NP_567575.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	634	635	520	347
AT1G28610	up	2.452113755471533	0.00369277702594828	0.04652533431207122	AT1G28610	--	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds;	--	NP_973932.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]	21	12	20	19
AT2G44310	up	1.5431802688226242	0.00372941867881991	0.04675551988963882	AT2G44310	--	GO:0005509,calcium ion binding; GO:0005829,cytosol;	--	NP_566015.1 Calcium-binding EF-hand family protein [Arabidopsis thaliana]	239	240	253	214
AT5G58840	down	-3.3109039013671975	0.00377776790147161	0.04712950641786889	AT5G58840	--	GO:0004252,serine-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016020,membrane; GO:0016787,hydrolase activity;	--	NP_568890.2 Subtilase family protein [Arabidopsis thaliana]	32	27	2	2
AT5G04930	down	-1.713094360472791	0.00396202515710091	0.04834810793812601	AT5G04930	--	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0005215,transporter activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0015914,phospholipid transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0034204,lipid translocation; GO:0045332,phospholipid translocation; GO:0046872,metal ion binding; GO:0140326,ATPase-coupled intramembrane lipid transporter activity;	--	NP_568146.1 aminophospholipid ATPase 1 [Arabidopsis thaliana]	162	142	80	50
AT5G57250	down	-2.561611247445681	0.00412955088776697	0.05004622385412828	AT5G57250	--	GO:0005515,protein binding; GO:0005739,mitochondrion;	--	BAA96948.1 salt-inducible protein-like [Arabidopsis thaliana]	23	23	10	14
AT1G26120	up	1.5750652139813075	0.00424545417089454	0.05120701831718781	AT1G26120	--	GO:0000139,Golgi membrane; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0010296,prenylcysteine methylesterase activity; GO:0016020,membrane; GO:0016787,hydrolase activity;	PCME; prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-]; K15889;	NP_173937.2 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	195	150	227	214
AT4G12800	up	2.3195856198397067	0.00437688678892055	0.05205222840094773	AT4G12800	--	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009538,photosystem I reaction center; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019904,protein domain specific binding; GO:0031969,chloroplast membrane;	psaL; photosystem I subunit XI; K02699;	NP_001328992.1 photosystem I subunit l [Arabidopsis thaliana]	3690	3748	3811	2855
AT2G44790	down	-2.2558433821450325	0.00451113648705981	0.05339926678868472	AT2G44790	--	GO:0005886,plasma membrane; GO:0009055,electron transfer activity; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0022900,electron transport chain; GO:0046872,metal ion binding;	--	NP_182006.1 uclacyanin 2 [Arabidopsis thaliana]	49	44	15	11
AT5G64920	up	2.1853687899417835	0.00487833651438039	0.05695122215182621	AT5G64920	--	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity;	--	NP_201297.1 COP1-interacting protein 8 [Arabidopsis thaliana]	38	38	40	56
AT3G63210	up	1.9827025153009608	0.00511572500235946	0.05944986361189423	AT3G63210	--	GO:0000932,P-body; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009737,response to abscisic acid; GO:0009744,response to sucrose; GO:0009749,response to glucose; GO:0010162,seed dormancy process; GO:0010494,cytoplasmic stress granule; GO:0019900,kinase binding; GO:0046872,metal ion binding; GO:1905582,response to mannose;	--	NP_567143.1 mediator of aba-regulated dormancy protein (DUF581) [Arabidopsis thaliana]	19	28	46	30
AT3G02570	down	-1.677161342283381	0.0053892980952758	0.06150566660303552	AT3G02570	--	GO:0004476,mannose-6-phosphate isomerase activity; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0008270,zinc ion binding; GO:0009298,GDP-mannose biosynthetic process; GO:0009416,response to light stimulus; GO:0009793,embryo development ending in seed dormancy; GO:0010043,response to zinc ion; GO:0016853,isomerase activity; GO:0032025,response to cobalt ion; GO:0033591,response to L-ascorbic acid; GO:0046686,response to cadmium ion; GO:0046872,metal ion binding;	manA, MPI; mannose-6-phosphate isomerase [EC:5.3.1.8]; K01809;	NP_186906.1 Mannose-6-phosphate isomerase, type I [Arabidopsis thaliana]	175	131	98	76
AT2G43540	up	2.7474598348804076	0.00569296422947835	0.06379214962050199	AT2G43540	--	GO:0016020,membrane;	--	NP_566001.1 transmembrane protein [Arabidopsis thaliana]	11	5	25	13
AT1G28190	down	-2.753128766869379	0.00571497450431216	0.06379214962050199	AT1G28190	--	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0009620,response to fungus;	--	NP_174140.1 hypothetical protein AT1G28190 [Arabidopsis thaliana]	34	11	11	9
AT5G64620	down	-1.584160828214551	0.00600590296848922	0.06674682556683434	AT5G64620	--	GO:0004857,enzyme inhibitor activity; GO:0005773,vacuole; GO:0043086,negative regulation of catalytic activity;	--	NP_201267.1 cell wall / vacuolar inhibitor of fructosidase 2 [Arabidopsis thaliana]	280	151	100	108
AT5G13310	up	2.602501078980602	0.00616238421500405	0.06713384884256382	AT5G13310	--	GO:0003674,molecular_function;	--	NP_001331631.1 hypothetical protein AT5G13310 [Arabidopsis thaliana]	42	35	37	29
AT1G23560	down	-1.9862221514309644	0.00617110551110303	0.06713384884256382	AT1G23560	--	--	--	NP_001320352.1 OBP32pep, putative (DUF220) [Arabidopsis thaliana]	57	53	16	19
AT5G19500	down	-1.847874466541505	0.00617262107236146	0.06713384884256382	AT5G19500	--	GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009706,chloroplast inner membrane; GO:0016020,membrane;	--	NP_197451.2 Tryptophan/tyrosine permease [Arabidopsis thaliana]	55	41	23	11
AT3G19040	up	2.4021297857067516	0.00630189914779439	0.06824822694100738	AT3G19040	--	GO:0001091,RNA polymerase II general transcription initiation factor binding; GO:0004402,histone acetyltransferase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005669,transcription factor TFIID complex; GO:0006325,chromatin organization; GO:0006366,transcription by RNA polymerase II; GO:0009416,response to light stimulus; GO:0016251,RNA polymerase II general transcription initiation factor activity; GO:0016570,histone modification; GO:0016573,histone acetylation; GO:0017025,TBP-class protein binding; GO:0051123,RNA polymerase II preinitiation complex assembly;	TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]; K03125;	NP_001327580.1 histone acetyltransferase of the TAFII250 family 2 [Arabidopsis thaliana]	86	60	66	65
AT5G49100	up	1.8535890362640792	0.00642699332999317	0.06901560348030644	AT5G49100	--	--	--	NP_568706.1 vitellogenin-like protein [Arabidopsis thaliana]	130	97	88	80
AT1G10760	up	2.3195324382900537	0.00646967937584192	0.06918207567864575	AT1G10760	--	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005975,carbohydrate metabolic process; GO:0005983,starch catabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009610,response to symbiotic fungus; GO:0009631,cold acclimation; GO:0009941,chloroplast envelope; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0050521,alpha-glucan, water dikinase activity; GO:0102216,maltodextrin water dikinase; GO:0102218,starch, H2O dikinase activity;	R1; alpha-glucan, water dikinase [EC:2.7.9.4]; K08244;	NP_001318975.1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein [Arabidopsis thaliana]	1123	1100	1121	818
AT5G67250	up	1.975086226018821	0.0067364093505541	0.07143400748816744	AT5G67250	--	GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0016567,protein ubiquitination; GO:0019005,SCF ubiquitin ligase complex; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;	--	NP_569047.1 SKP1/ASK1-interacting protein 2 [Arabidopsis thaliana]	112	122	106	109
AT1G76090	up	1.7609152940709087	0.00700216795609071	0.07394405580187086	AT1G76090	--	GO:0003838,sterol 24-C-methyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008168,methyltransferase activity; GO:0008202,steroid metabolic process; GO:0016020,membrane; GO:0016126,sterol biosynthetic process; GO:0016740,transferase activity; GO:0030797,24-methylenesterol C-methyltransferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process;	E2.1.1.143; 24-methylenesterol C-methyltransferase [EC:2.1.1.143]; K08242;	NP_177736.1 sterol methyltransferase 3 [Arabidopsis thaliana]	320	240	198	138
AT5G53050	up	1.549811271727295	0.0070865048487318	0.0741472943577812	AT5G53050	--	GO:0003824,catalytic activity; GO:0016020,membrane; GO:0016787,hydrolase activity;	--	NP_001032065.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	55	52	27	29
AT3G16460	down	-2.9777071116861187	0.0073100990915344	0.07453471930656069	AT3G16460	--	GO:0005507,copper ion binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0009506,plasmodesma; GO:0030246,carbohydrate binding;	--	NP_188267.1 Mannose-binding lectin superfamily protein [Arabidopsis thaliana]	23	30	3	3
AT3G09550	down	-2.161227837329001	0.00734746883772449	0.07453471930656069	AT3G09550	--	GO:0005515,protein binding; GO:0008150,biological_process; GO:0016020,membrane;	--	NP_001319511.1 Ankyrin repeat family protein [Arabidopsis thaliana]	37	45	8	8
AT4G22320	down	-2.0051732455528946	0.00761318792675028	0.07600034735064626	AT4G22320	--	GO:0008150,biological_process;	--	NP_001190798.1 golgin family A protein [Arabidopsis thaliana]	39	40	20	8
AT3G28930	up	2.0008632362053547	0.00872729089503567	0.08381492576553123	AT3G28930	--	GO:0005829,cytosol; GO:0009617,response to bacterium; GO:0016740,transferase activity; GO:0016746,acyltransferase activity;	--	NP_001326184.1 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana]	57	31	52	22
AT5G27430	down	-1.7563819590268022	0.00897495615231314	0.08586941130690583	AT5G27430	--	GO:0005783,endoplasmic reticulum; GO:0005787,signal peptidase complex; GO:0005789,endoplasmic reticulum membrane; GO:0006465,signal peptide processing; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031090,organelle membrane; GO:0045047,protein targeting to ER;	SPCS3, SPC3; signal peptidase complex subunit 3 [EC:3.4.-.-]; K12948;	NP_198095.1 Signal peptidase subunit [Arabidopsis thaliana]	47	68	25	9
AT2G36790	up	2.167454743635643	0.00909379902332588	0.08651226547883133	AT2G36790	--	GO:0005783,endoplasmic reticulum; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0051555,flavonol biosynthetic process; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0080046,quercetin 4'-O-glucosyltransferase activity;	UGT73C6; flavonol-3-O-L-rhamnoside-7-O-glucosyltransferase [EC:2.4.1.-]; K22771;	NP_181217.1 UDP-glucosyl transferase 73C6 [Arabidopsis thaliana]	11	12	19	33
AT1G13690	down	-1.6074115422737716	0.00914412550640692	0.08651226547883133	AT1G13690	--	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0008150,biological_process;	--	NP_563931.2 ATPase E1 [Arabidopsis thaliana]	216	162	106	90
AT4G14100	down	-2.1914552229536284	0.00952753998731327	0.08980588617671216	AT4G14100	--	GO:0000325,plant-type vacuole; GO:0008150,biological_process; GO:0016740,transferase activity; GO:0099503,secretory vesicle;	--	NP_567420.1 transferases, transferring glycosyl groups [Arabidopsis thaliana]	70	54	33	5
AT5G05440	down	-1.6876930596822015	0.0097939492512352	0.09146572479217194	AT5G05440	--	GO:0004864,protein phosphatase inhibitor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0009738,abscisic acid-activated signaling pathway; GO:0010427,abscisic acid binding; GO:0016020,membrane; GO:0038023,signaling receptor activity; GO:0043086,negative regulation of catalytic activity; GO:0080163,regulation of protein serine/threonine phosphatase activity;	PYL; abscisic acid receptor PYR/PYL family; K14496;	NP_196163.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein [Arabidopsis thaliana]	66	52	25	19
AT3G50960	down	-1.8015652112325755	0.01026007496923654	0.09519516292763648	AT3G50960	--	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005874,microtubule; GO:0043622,cortical microtubule organization; GO:0048487,beta-tubulin binding;	--	NP_001325881.1 thioredoxin domain PLP3A-like protein [Arabidopsis thaliana]	31	41	28	14
AT2G19780	up	2.478844136415347	0.01028631426526523	0.09519516292763648	AT2G19780	--	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005575,cellular_component;	--	NP_179568.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]	84	64	55	54
AT1G48620	up	1.5116766843237863	0.01128234096818139	0.10218347958726565	AT1G48620	--	GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006334,nucleosome assembly; GO:0009294,DNA-mediated transformation; GO:0030261,chromosome condensation; GO:0031492,nucleosomal DNA binding; GO:0045910,negative regulation of DNA recombination;	--	NP_175295.1 high mobility group A5 [Arabidopsis thaliana]	234	264	231	176
AT5G19510	up	1.671746190326289	0.01173409585958227	0.10478341741276095	AT5G19510	--	GO:0003746,translation elongation factor activity; GO:0005085,guanyl-nucleotide exchange factor activity; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005853,eukaryotic translation elongation factor 1 complex; GO:0006412,translation; GO:0006414,translational elongation; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0048046,apoplast; GO:0050790,regulation of catalytic activity;	--	NP_568375.2 Translation elongation factor EF1B/ribosomal protein S6 family protein [Arabidopsis thaliana]	1171	1140	1081	807
AT4G27860	up	1.7061841320228135	0.01191542173757943	0.10603058853894982	AT4G27860	--	GO:0005381,iron ion transmembrane transporter activity; GO:0005384,manganese ion transmembrane transporter activity; GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006880,intracellular sequestering of iron ion; GO:0010168,ER body; GO:0016020,membrane; GO:0030026,cellular manganese ion homeostasis; GO:0034755,iron ion transmembrane transport; GO:0071421,manganese ion transmembrane transport;	--	NP_001190855.1 vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]	20	19	31	35
AT1G72300	down	-2.4705006551634305	0.01199722356978543	0.1063865295648221	AT1G72300	--	GO:0000166,nucleotide binding; GO:0001653,peptide receptor activity; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0009826,unidimensional cell growth; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0031347,regulation of defense response; GO:0042802,identical protein binding; GO:0045851,pH reduction; GO:0106310,protein serine kinase activity;	--	CAD5316993.1 unnamed protein product [Arabidopsis thaliana]	25	30	5	6
AT2G17300	up	2.2765167077915507	0.0121351572902803	0.10723602536028952	AT2G17300	--	--	--	NP_179322.1 hypothetical protein AT2G17300 [Arabidopsis thaliana]	88	68	74	53
AT1G16750	down	-1.623014632396223	0.01246229912035308	0.109367418142409	AT1G16750	--	--	--	NP_564005.2 GPI-anchored adhesin-like protein, putative (Protein of unknown function, DUF547) [Arabidopsis thaliana]	87	67	47	46
AT5G09760	up	2.069456885663641	0.01259340860317386	0.1101228081842824	AT5G09760	--	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; GO:0071555,cell wall organization;	--	NP_001331158.1 Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]	252	232	211	138
AT4G12080	up	1.9445815413473913	0.01263491551662493	0.1101228081842824	AT4G12080	--	GO:0003677,DNA binding; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0043565,sequence-specific DNA binding; GO:0098687,chromosomal region;	--	NP_192945.2 AT-hook motif nuclear-localized protein 1 [Arabidopsis thaliana]	12	8	39	23
AT3G17030	up	2.692350060039301	0.01280332840658262	0.11083153331548563	AT3G17030	--	GO:0003674,molecular_function;	--	NP_188328.5 Nucleic acid-binding proteins superfamily [Arabidopsis thaliana]	13	12	10	10
AT1G64710	up	2.340094337689372	0.01342739737602007	0.11450748348724524	AT1G64710	--	GO:0004022,alcohol dehydrogenase (NAD+) activity; GO:0004024,alcohol dehydrogenase activity, zinc-dependent; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008270,zinc ion binding; GO:0016491,oxidoreductase activity; GO:0018455,alcohol dehydrogenase [NAD(P)+] activity; GO:0046294,formaldehyde catabolic process; GO:0046872,metal ion binding; GO:0051903,S-(hydroxymethyl)glutathione dehydrogenase activity;	E1.1.1.1, adh; alcohol dehydrogenase [EC:1.1.1.1]; K00001;	NP_176652.3 GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]	15	18	21	8
AT3G63470	down	-1.5222243986055677	0.01413391708841487	0.11890920978230345	AT3G63470	--	GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016787,hydrolase activity;	--	NP_191906.1 serine carboxypeptidase-like 40 [Arabidopsis thaliana]	166	171	98	60
AT3G02170	up	1.52815799709769	0.01419248428997567	0.11890920978230345	AT3G02170	--	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0008017,microtubule binding; GO:0009826,unidimensional cell growth; GO:0051513,regulation of monopolar cell growth;	--	NP_566165.2 longifolia2 [Arabidopsis thaliana]	298	280	223	196
AT2G42940	down	-1.891722737701354	0.01425041610357664	0.11890920978230345	AT2G42940	--	GO:0003677,DNA binding; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0010208,pollen wall assembly; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0010529,negative regulation of transposition; GO:0031490,chromatin DNA binding; GO:0035067,negative regulation of histone acetylation; GO:1900111,positive regulation of histone H3-K9 dimethylation;	--	NP_181822.1 Putative AT-hook DNA-binding family protein [Arabidopsis thaliana]	49	55	6	7
AT5G57780	up	2.7149481158160143	0.01437666787084453	0.11957065271666452	AT5G57780	--	GO:0006355,regulation of DNA-templated transcription;	--	NP_200586.1 transcription factor [Arabidopsis thaliana]	3	5	18	16
AT4G19000	up	3.6807159105111182	0.01451071173777529	0.1198159888992991	AT4G19000	--	GO:0003746,translation elongation factor activity; GO:0005634,nucleus; GO:0006414,translational elongation; GO:0009742,brassinosteroid mediated signaling pathway; GO:0032784,regulation of DNA-templated transcription elongation;	--	NP_001319989.1 Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana]	2	1	10	12
AT3G27770	down	-1.8186583845727384	0.01475286821750335	0.12064548464433668	AT3G27770	--	GO:0016020,membrane;	--	NP_566825.1 plant/protein [Arabidopsis thaliana]	49	56	18	13
AT4G29580	up	2.867918368521863	0.01479033053400119	0.12064548464433668	AT4G29580	--	GO:0003824,catalytic activity; GO:0004126,cytidine deaminase activity; GO:0005829,cytosol; GO:0006807,nitrogen compound metabolic process; GO:0008270,zinc ion binding; GO:0009972,cytidine deamination; GO:0046872,metal ion binding; GO:0071704,organic substance metabolic process;	--	NP_001154274.1 Cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana]	5	2	16	15
AT3G49940	down	-2.0556982660000536	0.01499288125618076	0.12151873502222944	AT3G49940	LBD	GO:0005515,protein binding; GO:0010468,regulation of gene expression;	--	NP_190563.1 LOB domain-containing protein 38 [Arabidopsis thaliana]	17	26	15	17
AT5G06940	up	1.9263311538652592	0.01522195295957114	0.122983715181297	AT5G06940	--	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016740,transferase activity;	--	NP_196311.1 Leucine-rich repeat receptor-like protein kinase family protein [Arabidopsis thaliana]	39	42	24	31
AT1G27640	up	1.7164636973676828	0.0159020173636711	0.1268671918198839	AT1G27640	--	GO:0003674,molecular_function;	--	NP_174085.1 hypothetical protein AT1G27640 [Arabidopsis thaliana]	14	17	47	23
AT1G67440	down	-1.7312921740253715	0.01595459611620387	0.12688889723668398	AT1G67440	--	GO:0000166,nucleotide binding; GO:0003723,RNA binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005739,mitochondrion; GO:0009658,chloroplast organization; GO:0016787,hydrolase activity; GO:0019843,rRNA binding; GO:0042254,ribosome biogenesis; GO:0046872,metal ion binding;	rsgA, engC; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]; K06949;	NP_001322691.1 Minichromosome maintenance (MCM2/3/5) family protein [Arabidopsis thaliana]	33	47	15	17
AT5G24830	down	-2.2211324433187087	0.01623712843152033	0.1281288410390198	AT5G24830	--	GO:0005515,protein binding;	--	NP_568460.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]	36	13	16	8
AT2G23610	down	-2.3403306450782484	0.01851248522554821	0.14191046656331385	AT2G23610	--	GO:0005773,vacuole; GO:0009694,jasmonic acid metabolic process; GO:0009696,salicylic acid metabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0031408,oxylipin biosynthetic process; GO:0051723,protein methylesterase activity; GO:0080030,methyl indole-3-acetate esterase activity; GO:0080031,methyl salicylate esterase activity; GO:0080032,methyl jasmonate esterase activity;	--	NP_179942.1 methyl esterase 3 [Arabidopsis thaliana]	19	25	9	6
AT3G05010	down	-1.581485147859948	0.01869478419582811	0.1428775548900377	AT3G05010	--	GO:0002237,response to molecule of bacterial origin; GO:0004930,G protein-coupled receptor activity; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0007165,signal transduction; GO:0007186,G protein-coupled receptor signaling pathway; GO:0008502,melatonin receptor activity; GO:0010015,root morphogenesis; GO:0016020,membrane; GO:0019236,response to pheromone; GO:0090333,regulation of stomatal closure; GO:1904408,melatonin binding;	--	NP_566244.1 Protein of unknown function, transmembrane-40 [Arabidopsis thaliana]	81	56	41	28
AT2G47910	up	1.5223041444144991	0.01893732307951878	0.14429786598016553	AT2G47910	--	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010275,NAD(P)H dehydrogenase complex assembly;	--	NP_973713.1 chlororespiratory reduction 6 [Arabidopsis thaliana]	44	24	26	39
AT1G78130	up	2.767441649234069	0.01971715910309425	0.14934574380171092	AT1G78130	--	GO:0009567,double fertilization forming a zygote and endosperm; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport;	--	NP_177937.1 Major facilitator superfamily protein [Arabidopsis thaliana]	3	9	17	10
AT3G56030	up	2.6994861113200503	0.02042038652997094	0.15379987292628916	AT3G56030	--	GO:0005515,protein binding; GO:0005739,mitochondrion;	--	NP_191162.2 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]	7	5	15	10
AT5G42320	up	1.73382096111622	0.02119837234139581	0.15821072612566672	AT5G42320	--	GO:0004181,metallocarboxypeptidase activity; GO:0006508,proteolysis; GO:0008270,zinc ion binding; GO:0016020,membrane;	--	NP_199047.2 Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]	21	27	17	37
AT3G21790	up	1.6210728551307731	0.02143233286038916	0.15902416072796044	AT3G21790	--	GO:0005829,cytosol; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity;	--	BAB02841.1 UTP-glucose glucosyltransferase [Arabidopsis thaliana]	43	42	40	25
AT1G03750	down	-2.038657899648074	0.02248481387665384	0.1653868535146937	AT1G03750	--	GO:0000166,nucleotide binding; GO:0003677,DNA binding; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0006281,DNA repair; GO:0006338,chromatin remodeling; GO:0006974,cellular response to DNA damage stimulus; GO:0016787,hydrolase activity; GO:0140658,ATP-dependent chromatin remodeler activity;	--	NP_171871.2 switch 2 [Arabidopsis thaliana]	19	22	21	8
AT4G37670	down	-2.0535689481172703	0.02283463805947618	0.16699469500392783	AT4G37670	--	GO:0004042,acetyl-CoA:L-glutamate N-acetyltransferase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006526,arginine biosynthetic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0103045,methione N-acyltransferase activity;	argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]; K14682;	NP_974701.1 N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana]	24	21	22	7
AT5G53880	up	1.847892013460697	0.02313999968983405	0.16824458566132944	AT5G53880	--	GO:0005739,mitochondrion; GO:0005886,plasma membrane; GO:0008150,biological_process;	--	NP_568802.1 hypothetical protein AT5G53880 [Arabidopsis thaliana]	106	69	71	49
AT3G44380	up	1.726211026837099	0.02320387016390044	0.16824458566132944	AT3G44380	--	GO:0005575,cellular_component; GO:0009269,response to desiccation;	--	NP_190024.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]	25	36	35	32
AT1G13110	up	2.010738513892804	0.02373885231373389	0.17076537182774654	AT1G13110	--	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding;	--	NP_172770.1 cytochrome P450, family 71 subfamily B, polypeptide 7 [Arabidopsis thaliana]	7	6	18	38
AT1G43670	up	1.7953859274711803	0.02375282578664922	0.17076537182774654	AT1G43670	--	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0005983,starch catabolic process; GO:0005986,sucrose biosynthetic process; GO:0006000,fructose metabolic process; GO:0006002,fructose 6-phosphate metabolic process; GO:0006094,gluconeogenesis; GO:0009737,response to abscisic acid; GO:0009750,response to fructose; GO:0015979,photosynthesis; GO:0016787,hydrolase activity; GO:0016791,phosphatase activity; GO:0030388,fructose 1,6-bisphosphate metabolic process; GO:0042132,fructose 1,6-bisphosphate 1-phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0046872,metal ion binding;	FBP, fbp; fructose-1,6-bisphosphatase I [EC:3.1.3.11]; K03841;	NP_175032.1 Inositol monophosphatase family protein [Arabidopsis thaliana]	458	431	239	232
AT2G46200	up	1.6408649852609756	0.02398036647198158	0.17143267604267734	AT2G46200	--	GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:1990904,ribonucleoprotein complex;	--	NP_850448.1 U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]	25	13	25	36
AT3G50430	down	-2.5719159996404706	0.02515280639815638	0.1786134809402114	AT3G50430	--	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane;	--	NP_190612.3 golgin [Arabidopsis thaliana]	20	20	4	4
AT2G41940	up	2.415267771356719	0.02539312744420607	0.1786134809402114	AT2G41940	C2H2	GO:0000976,transcription cis-regulatory region binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009736,cytokinin-activated signaling pathway; GO:0009738,abscisic acid-activated signaling pathway; GO:0009739,response to gibberellin; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0010026,trichome differentiation; GO:0010090,trichome morphogenesis; GO:0030154,cell differentiation; GO:0046872,metal ion binding;	--	NP_181725.1 zinc finger protein 8 [Arabidopsis thaliana]	9	7	13	13
AT2G04410	up	1.7256776488457497	0.02543636241072417	0.1786134809402114	AT2G04410	--	GO:0005739,mitochondrion; GO:0005886,plasma membrane; GO:0009506,plasmodesma;	--	NP_178522.2 RPM1-interacting protein 4 (RIN4) family protein [Arabidopsis thaliana]	87	104	88	97
AT5G54090	up	1.92609650023401	0.02636027951510678	0.18192566209344888	AT5G54090	--	GO:0000166,nucleotide binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0004519,endonuclease activity; GO:0005524,ATP binding; GO:0006298,mismatch repair; GO:0016887,ATP hydrolysis activity; GO:0030983,mismatched DNA binding; GO:0045910,negative regulation of DNA recombination; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0140664,ATP-dependent DNA damage sensor activity;	--	NP_200220.2 DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]	12	11	24	17
AT3G05820	down	-1.67081136391924	0.0272162555146972	0.18569804365926107	AT3G05820	--	GO:0004564,beta-fructofuranosidase activity; GO:0004575,sucrose alpha-glucosidase activity; GO:0005739,mitochondrion; GO:0005975,carbohydrate metabolic process; GO:0005987,sucrose catabolic process; GO:0008152,metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0033926,glycopeptide alpha-N-acetylgalactosaminidase activity;	--	NP_001326532.1 invertase H [Arabidopsis thaliana]	49	36	34	17
AT2G25880	up	2.0024710520908826	0.02789947384456704	0.18833994942817808	AT2G25880	--	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity;	--	NP_001325078.1 ataurora2 [Arabidopsis thaliana]	29	35	22	20
AT3G45140	up	1.555578191751124	0.02812150650872944	0.18884627983643665	AT3G45140	--	GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009611,response to wounding; GO:0009617,response to bacterium; GO:0009620,response to fungus; GO:0009695,jasmonic acid biosynthetic process; GO:0009753,response to jasmonic acid; GO:0009941,chloroplast envelope; GO:0010597,green leaf volatile biosynthetic process; GO:0016165,linoleate 13S-lipoxygenase activity; GO:0016491,oxidoreductase activity; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0031408,oxylipin biosynthetic process; GO:0034440,lipid oxidation; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:0080027,response to herbivore; GO:1901149,salicylic acid binding;	LOX2S; lipoxygenase [EC:1.13.11.12]; K00454;	NP_566875.1 lipoxygenase 2 [Arabidopsis thaliana]	7418	7766	7296	5431
AT3G24730	up	2.240499926377405	0.0287723626276456	0.18982745113536004	AT3G24730	--	GO:0000398,mRNA splicing, via spliceosome; GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005682,U5 snRNP; GO:0006376,mRNA splice site selection; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0046540,U4/U6 x U5 tri-snRNP complex;	--	NP_189117.2 mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana]	18	7	13	13
AT3G13440	up	2.0652440429073664	0.02895006455864014	0.1898915317055133	AT3G13440	--	GO:0003676,nucleic acid binding; GO:0005829,cytosol; GO:0006415,translational termination; GO:0006479,protein methylation; GO:0006807,nitrogen compound metabolic process; GO:0008168,methyltransferase activity; GO:0008276,protein methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0035657,eRF1 methyltransferase complex; GO:0043414,macromolecule methylation; GO:0044238,primary metabolic process; GO:0055072,iron ion homeostasis;	--	NP_001327233.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]	13	15	14	14
AT1G76810	down	-1.582599710371566	0.02907354769349761	0.1900285530199873	AT1G76810	--	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006413,translational initiation;	EIF5B; translation initiation factor 5B; K03243;	NP_177807.3 eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]	269	337	69	67
AT2G04039	down	-2.6562150557165456	0.02930127207027629	0.190720556058448	AT2G04039	--	GO:0005739,mitochondrion; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009579,thylakoid;	--	NP_565308.1 DUF2996 family protein [Arabidopsis thaliana]	8	14	11	5
AT1G22400	up	1.6640306464783947	0.02955925390725269	0.19134100422139833	AT1G22400	--	GO:0008194,UDP-glycosyltransferase activity; GO:0015020,glucuronosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0050403,trans-zeatin O-beta-D-glucosyltransferase activity; GO:0050502,cis-zeatin O-beta-D-glucosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity;	UGT85A; UDP-glucosyltransferase 85A [EC:2.4.1.-]; K23452;	NP_173656.1 UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]	164	113	59	53
AT1G22730	up	1.981676444785499	0.02960388218024166	0.19134100422139833	AT1G22730	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006417,regulation of translation; GO:0009646,response to absence of light; GO:0043022,ribosome binding; GO:0045892,negative regulation of DNA-templated transcription; GO:0090549,response to carbon starvation;	--	NP_173687.1 MA3 domain-containing protein [Arabidopsis thaliana]	72	58	77	47
AT5G06310	down	-2.114855774454769	0.03114728986849493	0.198174631788299	AT5G06310	--	GO:0000723,telomere maintenance; GO:0000781,chromosome, telomeric region; GO:0000783,nuclear telomere cap complex; GO:0003677,DNA binding; GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0010521,telomerase inhibitor activity; GO:0016233,telomere capping; GO:0032210,regulation of telomere maintenance via telomerase; GO:0043047,single-stranded telomeric DNA binding; GO:0051974,negative regulation of telomerase activity; GO:0098505,G-rich strand telomeric DNA binding;	--	NP_196249.2 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]	16	14	12	11
AT4G33620	up	1.9171394067407024	0.03191847487875408	0.20128463097302093	AT4G33620	--	GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0016926,protein desumoylation; GO:0070139,SUMO-specific endopeptidase activity;	--	NP_001320126.1 Cysteine proteinases superfamily protein [Arabidopsis thaliana]	24	15	17	17
AT5G64770	up	2.5602756930107606	0.03195245222518682	0.20128463097302093	AT5G64770	--	GO:0005179,hormone activity; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0005783,endoplasmic reticulum; GO:0007165,signal transduction; GO:0008083,growth factor activity; GO:0008284,positive regulation of cell population proliferation; GO:0009733,response to auxin; GO:0009786,regulation of asymmetric cell division; GO:0009958,positive gravitropism; GO:0010082,regulation of root meristem growth; GO:0022622,root system development; GO:0030154,cell differentiation; GO:0032880,regulation of protein localization; GO:0048527,lateral root development; GO:2000012,regulation of auxin polar transport; GO:2000023,regulation of lateral root development; GO:2000067,regulation of root morphogenesis; GO:2000280,regulation of root development;	--	NP_201282.1 root meristem growth factor [Arabidopsis thaliana]	10	7	11	8
AT5G21950	down	-1.5381864651066843	0.03495695572017774	0.21179612864521677	AT5G21950	--	GO:0003674,molecular_function;	--	NP_680183.2 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]	61	40	21	20
AT4G38440	up	1.8666747795939995	0.03519116034315867	0.21223104993682188	AT4G38440	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0030154,cell differentiation;	--	NP_195557.2 RPAP1-like, carboxy-terminal protein [Arabidopsis thaliana]	130	117	123	61
AT4G01037	up	1.6672637196866766	0.03614644583684741	0.21543958935544885	AT4G01037	--	GO:0000373,Group II intron splicing; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0009507,chloroplast; GO:0009536,plastid; GO:0015979,photosynthesis;	--	NP_001118908.1 Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana]	167	136	124	131
AT1G15700	up	1.6481006907152498	0.03638802558985239	0.2159401206687921	AT1G15700	--	GO:0000275,mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1); GO:0006754,ATP biosynthetic process; GO:0006811,ion transport; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009544,chloroplast ATP synthase complex; GO:0009579,thylakoid; GO:0015986,proton motive force-driven ATP synthesis; GO:0016020,membrane; GO:0030234,enzyme regulator activity; GO:0045261,proton-transporting ATP synthase complex, catalytic core F(1); GO:0046933,proton-transporting ATP synthase activity, rotational mechanism; GO:0050790,regulation of catalytic activity; GO:0110165,cellular anatomical entity; GO:1902600,proton transmembrane transport; GO:2000067,regulation of root morphogenesis;	ATPF1G, atpG; F-type H+-transporting ATPase subunit gamma; K02115;	NP_173022.1 ATPase, F1 complex, gamma subunit protein [Arabidopsis thaliana]	40	39	35	34
AT2G41490	down	-1.6746264329881022	0.03790983554725829	0.2200584614502596	AT2G41490	--	GO:0003975,UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006486,protein glycosylation; GO:0006487,protein N-linked glycosylation; GO:0006488,dolichol-linked oligosaccharide biosynthetic process; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016780,phosphotransferase activity, for other substituted phosphate groups; GO:0043231,intracellular membrane-bounded organelle;	ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]; K01001;	NP_565950.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase [Arabidopsis thaliana]	38	31	8	16
AT5G44130	up	1.6211585185351751	0.03814937178867385	0.2200584614502596	AT5G44130	--	GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0009834,plant-type secondary cell wall biogenesis; GO:0016020,membrane;	--	NP_199226.1 FASCICLIN-like arabinogalactan protein 13 precursor [Arabidopsis thaliana]	55	47	34	20
AT3G05330	up	1.6418267888996017	0.03927332219425496	0.22460810108849183	AT3G05330	--	GO:0000911,cytokinesis by cell plate formation; GO:0000914,phragmoplast assembly; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005875,microtubule associated complex; GO:0008017,microtubule binding; GO:0009524,phragmoplast; GO:0009574,preprophase band; GO:2000694,regulation of phragmoplast microtubule organization;	--	NP_187184.2 cyclin family [Arabidopsis thaliana]	20	25	23	18
AT1G17600	up	2.6605524707646246	0.03980122208287733	0.22571683965361375	AT1G17600	--	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006952,defense response; GO:0007165,signal transduction; GO:0016020,membrane; GO:0043531,ADP binding; GO:0045088,regulation of innate immune response;	--	NP_173203.2 Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]	16	1	10	14
AT2G02500	down	-1.5085953188391823	0.03982194931413461	0.22571683965361375	AT2G02500	--	GO:0003824,catalytic activity; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0019288,isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0050518,2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; GO:0070567,cytidylyltransferase activity;	ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]; K00991;	NP_001325418.1 Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]	66	49	14	11
AT2G42270	down	-1.8968647152039184	0.0408767123493635	0.2300444160170728	AT2G42270	--	GO:0000166,nucleotide binding; GO:0000388,spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005829,cytosol; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0009506,plasmodesma; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity;	SNRNP200, BRR2; pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13]; K12854;	NP_181756.1 U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]	26	29	8	6
AT4G21310	down	-1.840867306950452	0.04147931019389588	0.23125439344305423	AT4G21310	--	GO:0005575,cellular_component; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0008150,biological_process; GO:0009855,determination of bilateral symmetry; GO:0016020,membrane; GO:0048366,leaf development;	--	NP_193862.1 transmembrane protein, putative (DUF1218) [Arabidopsis thaliana]	39	25	5	11
AT1G01130	down	-2.3872360060771882	0.0415125801200001	0.23125439344305423	AT1G01130	--	--	--	NP_171621.2 CBL-interacting Serine/Threonine-kinase [Arabidopsis thaliana]	24	20	8	1
AT4G24370	up	1.7803798989503328	0.04245468580092642	0.2338683449423328	AT4G24370	--	GO:0005515,protein binding;	--	NP_567700.1 hypothetical protein AT4G24370 [Arabidopsis thaliana]	58	41	37	19
AT1G67820	up	1.862702053239353	0.04462868774793812	0.2414098574549171	AT1G67820	--	GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0006470,protein dephosphorylation; GO:0016787,hydrolase activity; GO:0017018,myosin phosphatase activity; GO:0043169,cation binding; GO:0046872,metal ion binding;	--	NP_176948.2 Protein phosphatase 2C family protein [Arabidopsis thaliana]	18	31	15	17
AT1G15415	up	1.7906604789491976	0.04491987739697373	0.2422056948629198	AT1G15415	--	GO:0005634,nucleus; GO:0005829,cytosol;	--	NP_172994.1 late embryogenesis abundant-like protein [Arabidopsis thaliana]	14	20	16	14
AT4G29880	up	2.2865037785853364	0.04522400106407109	0.2433299845836383	AT4G29880	--	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0008150,biological_process;	--	NP_194717.2 plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]	11	9	10	9
AT4G20325	down	-2.619119319072297	0.04614203241331629	0.24598530799221735	AT4G20325	--	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0006401,RNA catabolic process; GO:0032299,ribonuclease H2 complex;	RNASEH2B; ribonuclease H2 subunit B; K10744;	NP_001078412.2 ribonuclease H2 subunit B [Arabidopsis thaliana]	16	19	5	1
AT5G26700	down	-2.2162651360174515	0.04615612335907738	0.24598530799221735	AT5G26700	--	GO:0005576,extracellular region; GO:0009506,plasmodesma; GO:0010497,plasmodesmata-mediated intercellular transport; GO:0030145,manganese ion binding; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:2000280,regulation of root development;	--	NP_850875.1 RmlC-like cupins superfamily protein [Arabidopsis thaliana]	25	18	9	2
AT4G14700	down	-2.1629443393806653	0.04754230695514142	0.250507600829886	AT4G14700	--	GO:0000166,nucleotide binding; GO:0000808,origin recognition complex; GO:0003677,DNA binding; GO:0003682,chromatin binding; GO:0003688,DNA replication origin binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005664,nuclear origin of replication recognition complex; GO:0006260,DNA replication; GO:0006270,DNA replication initiation; GO:0006355,regulation of DNA-templated transcription; GO:0010385,double-stranded methylated DNA binding; GO:0016887,ATP hydrolysis activity; GO:0033314,mitotic DNA replication checkpoint signaling; GO:0046872,metal ion binding;	ORC1; origin recognition complex subunit 1; K02603;	NP_567440.1 origin recognition complex 1 [Arabidopsis thaliana]	33	17	7	2
AT4G39960	up	1.5263372414119836	0.04777603695798415	0.2512190373100613	AT4G39960	--	GO:0005506,iron ion binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0009408,response to heat; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009941,chloroplast envelope; GO:0031072,heat shock protein binding; GO:0042026,protein refolding; GO:0046872,metal ion binding; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding;	--	NP_001329618.1 Molecular chaperone Hsp40/DnaJ family protein [Arabidopsis thaliana]	201	234	126	161
AT4G24350	down	-2.310788929453576	0.04849457773282555	0.25447154707224956	AT4G24350	--	GO:0003824,catalytic activity; GO:0005829,cytosol; GO:0009116,nucleoside metabolic process; GO:0009611,response to wounding;	--	NP_194166.2 Phosphorylase superfamily protein [Arabidopsis thaliana]	26	18	1	14
AT5G18780	down	-1.7589507312983024	0.04955519858198511	0.2589691589140701	AT5G18780	--	GO:0005515,protein binding;	--	NP_001190332.1 F-box/RNI-like superfamily protein [Arabidopsis thaliana]	30	13	14	12