ID	wt_1	wt_2	h3_1	h3_2	Name	GO	KEGG	Nr
AT1G01080	24.17	29.08	10.99	16.01	AT1G01080	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:1901259,chloroplast rRNA processing; GO:1990904,ribonucleoprotein complex; 	--	NP_171616.1 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
AT1G01280	34.69	41.99	23.77	18.11	AT1G01280	GO:0002933,lipid hydroxylation; GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0009555,pollen development; GO:0010208,pollen wall assembly; GO:0010584,pollen exine formation; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0048653,anther development; GO:0051791,medium-chain fatty acid metabolic process; GO:0051792,medium-chain fatty acid biosynthetic process; GO:0052722,fatty acid in-chain hydroxylase activity; GO:0080110,sporopollenin biosynthetic process; 	--	NP_171635.1 cytochrome P450, family 703, subfamily A, polypeptide 2 [Arabidopsis thaliana]
AT1G01430	24.10	17.84	30.52	39.55	AT1G01430	GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0016413,O-acetyltransferase activity; GO:0016740,transferase activity; 	--	NP_171650.2 TRICHOME BIREFRINGENCE-LIKE 25 [Arabidopsis thaliana]
AT1G01570	3.68	3.20	11.25	11.34	AT1G01570	GO:0005783,endoplasmic reticulum; GO:0008375,acetylglucosaminyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; 	--	NP_001322080.1 transferring glycosyl group transferase (DUF604) [Arabidopsis thaliana]
AT1G01790	14.19	13.23	10.74	7.63	AT1G01790	GO:0005576,extracellular region; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006813,potassium ion transport; GO:0008324,cation transmembrane transporter activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009658,chloroplast organization; GO:0009941,chloroplast envelope; GO:0010109,regulation of photosynthesis; GO:0015297,antiporter activity; GO:0015299,solute:proton antiporter activity; GO:0015386,potassium:proton antiporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031969,chloroplast membrane; GO:0055085,transmembrane transport; GO:0071805,potassium ion transmembrane transport; GO:0098655,cation transmembrane transport; GO:1902600,proton transmembrane transport; 	--	NP_001320631.1 K+ efflux antiporter 1 [Arabidopsis thaliana]
AT1G02050	135.29	140.24	55.96	55.87	AT1G02050	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009813,flavonoid biosynthetic process; GO:0010584,pollen exine formation; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0030639,polyketide biosynthetic process; GO:0080110,sporopollenin biosynthetic process; GO:0090439,tetraketide alpha-pyrone synthase activity; 	--	NP_171707.1 Chalcone and stilbene synthase family protein [Arabidopsis thaliana]
AT1G02070	34.91	20.16	40.90	75.59	AT1G02070	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_563644.1 zinc ion-binding protein [Arabidopsis thaliana]
AT1G02160	48.74	43.21	86.06	81.52	AT1G02160	GO:0008150,biological_process; 	--	NP_171718.1 Cox19 family protein (CHCH motif) [Arabidopsis thaliana]
AT1G02410	10.30	8.94	25.78	16.57	AT1G02410	GO:0005507,copper ion binding; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0008150,biological_process; GO:0009846,pollen germination; GO:0010101,post-embryonic root morphogenesis; GO:0016020,membrane; GO:0043621,protein self-association; GO:1904960,positive regulation of cytochrome-c oxidase activity; 	COX11, ctaG; cytochrome c oxidase assembly protein subunit 11; K02258; 	NP_001321510.1 cytochrome c oxidase assembly protein CtaG / Cox11 family [Arabidopsis thaliana]
AT1G02500	274.33	292.36	165.87	173.97	AT1G02500	GO:0000166,nucleotide binding; GO:0004478,methionine adenosyltransferase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006556,S-adenosylmethionine biosynthetic process; GO:0006730,one-carbon metabolic process; GO:0009505,plant-type cell wall; GO:0009693,ethylene biosynthetic process; GO:0016740,transferase activity; GO:0046872,metal ion binding; 	metK; S-adenosylmethionine synthetase [EC:2.5.1.6]; K00789; 	NP_171751.1 S-adenosylmethionine synthetase 1 [Arabidopsis thaliana]
AT1G02520	4.95	3.76	1.76	2.49	AT1G02520	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; 	ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]; K05658; 	NP_001322407.1 P-glycoprotein 11 [Arabidopsis thaliana]
AT1G02630	3.00	4.62	0.58	0.00	AT1G02630	GO:0005337,nucleoside transmembrane transporter activity; GO:0005886,plasma membrane; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1901642,nucleoside transmembrane transport; 	SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3; K15014; 	NP_171763.1 Nucleoside transporter family protein [Arabidopsis thaliana]
AT1G02640	31.48	31.37	19.89	20.68	AT1G02640	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009044,xylan 1,4-beta-xylosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0031222,arabinan catabolic process; GO:0045493,xylan catabolic process; GO:0046556,alpha-L-arabinofuranosidase activity; 	--	NP_563659.1 beta-xylosidase 2 [Arabidopsis thaliana]
AT1G02780	812.20	923.83	1480.06	1300.09	AT1G02780	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L19e, RPL19; large subunit ribosomal protein L19e; K02885; 	NP_171777.1 Ribosomal protein L19e family protein [Arabidopsis thaliana]
AT1G03130	242.29	310.26	135.53	134.73	AT1G03130	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009538,photosystem I reaction center; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019904,protein domain specific binding; 	psaD; photosystem I subunit II; K02692; 	NP_171812.1 photosystem I subunit D-2 [Arabidopsis thaliana]
AT1G03360	15.96	19.13	46.32	38.50	AT1G03360	GO:0000176,nuclear exosome (RNase complex); GO:0000177,cytoplasmic exosome (RNase complex); GO:0000178,exosome (RNase complex); GO:0000460,maturation of 5.8S rRNA; GO:0000467,exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0006364,rRNA processing; GO:0034427,nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'; GO:0034475,U4 snRNA 3'-end processing; GO:0043229,intracellular organelle; GO:0043928,exonucleolytic catabolism of deadenylated mRNA; GO:0060149,negative regulation of post-transcriptional gene silencing; GO:0071034,CUT catabolic process; GO:0071035,nuclear polyadenylation-dependent rRNA catabolic process; GO:0071038,nuclear polyadenylation-dependent tRNA catabolic process; GO:0071051,polyadenylation-dependent snoRNA 3'-end processing; 	RRP4, EXOSC2; exosome complex component RRP4; K03679; 	NP_171835.1 ribosomal RNA processing 4 [Arabidopsis thaliana]
AT1G03390	3.55	4.46	0.73	0.00	AT1G03390	GO:0016740,transferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; 	HHT1; omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]; K15400; 	NP_171838.1 HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]
AT1G03475	172.34	189.41	110.45	113.59	AT1G03475	GO:0004109,coproporphyrinogen oxidase activity; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006782,protoporphyrinogen IX biosynthetic process; GO:0006783,heme biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0015995,chlorophyll biosynthetic process; GO:0016491,oxidoreductase activity; GO:0042803,protein homodimerization activity; GO:0048046,apoplast; 	CPOX, hemF; coproporphyrinogen III oxidase [EC:1.3.3.3]; K00228; 	NP_171847.4 Coproporphyrinogen III oxidase [Arabidopsis thaliana]
AT1G03530	4.97	6.53	13.32	20.01	AT1G03530	GO:0000493,box H/ACA snoRNP assembly; GO:0001522,pseudouridine synthesis; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005732,sno(s)RNA-containing ribonucleoprotein complex; GO:0009506,plasmodesma; GO:0042254,ribosome biogenesis; 	--	NP_171852.2 nuclear assembly factor 1 [Arabidopsis thaliana]
AT1G03680	403.93	380.54	195.59	207.27	AT1G03680	GO:0004857,enzyme inhibitor activity; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0006109,regulation of carbohydrate metabolic process; GO:0008047,enzyme activator activity; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0015035,protein-disulfide reductase activity; GO:0016491,oxidoreductase activity; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0043085,positive regulation of catalytic activity; GO:0043086,negative regulation of catalytic activity; GO:0048046,apoplast; GO:1901149,salicylic acid binding; 	trxA; thioredoxin 1; K03671; 	NP_849585.1 thioredoxin M-type 1 [Arabidopsis thaliana]
AT1G03860	95.24	66.40	145.40	135.53	AT1G03860	GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0007005,mitochondrion organization; GO:0009505,plant-type cell wall; GO:0016020,membrane; 	--	NP_171882.1 prohibitin 2 [Arabidopsis thaliana]
AT1G03870	20.47	18.00	6.80	6.41	AT1G03870	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009834,plant-type secondary cell wall biogenesis; GO:0016020,membrane; GO:0099503,secretory vesicle; 	--	NP_563692.1 FASCICLIN-like arabinoogalactan 9 [Arabidopsis thaliana]
AT1G04050	2.66	2.80	0.31	0.79	AT1G04050	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0006325,chromatin organization; GO:0008168,methyltransferase activity; GO:0008270,zinc ion binding; GO:0016740,transferase activity; GO:0018024,histone-lysine N-methyltransferase activity; GO:0031047,gene silencing by RNA; GO:0032259,methylation; GO:0034968,histone lysine methylation; GO:0042802,identical protein binding; GO:0046872,metal ion binding; 	--	NP_001320725.1 histone-lysine N-methyltransferase SUVR2-like protein [Arabidopsis thaliana]
AT1G04210	12.98	14.58	16.07	27.28	AT1G04210	GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0018105,peptidyl-serine phosphorylation; GO:0018107,peptidyl-threonine phosphorylation; 	--	NP_171917.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]
AT1G04480	870.69	801.74	1453.50	1666.54	AT1G04480	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005730,nucleolus; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0070180,large ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L23e, RPL23; large subunit ribosomal protein L23e; K02894; 	NP_180895.1 Ribosomal protein L14p/L23e family protein [Arabidopsis thaliana]
AT1G04750	106.85	115.49	69.02	76.90	AT1G04750	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005886,plasma membrane; GO:0009504,cell plate; GO:0009506,plasmodesma; GO:0009920,cell plate formation involved in plant-type cell wall biogenesis; GO:0015031,protein transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016192,vesicle-mediated transport; GO:0031901,early endosome membrane; GO:0034976,response to endoplasmic reticulum stress; GO:0072659,protein localization to plasma membrane; 	--	NP_171967.1 vesicle-associated membrane protein 721 [Arabidopsis thaliana]
AT1G04900	11.11	8.14	19.04	18.93	AT1G04900	GO:0005739,mitochondrion; GO:0006479,protein methylation; GO:0008150,biological_process; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0035243,protein-arginine omega-N symmetric methyltransferase activity; 	--	NP_563721.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) [Arabidopsis thaliana]
AT1G05360	9.60	12.75	5.22	5.03	AT1G05360	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0010256,endomembrane system organization; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0016192,vesicle-mediated transport; 	--	NP_563735.1 vacuole membrane-like protein [Arabidopsis thaliana]
AT1G05577	5.86	1.61	0.30	0.78	AT1G05577	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0007049,cell cycle; GO:0016020,membrane; GO:0016324,apical plasma membrane; GO:0031234,extrinsic component of cytoplasmic side of plasma membrane; GO:0042803,protein homodimerization activity; GO:0051258,protein polymerization; GO:0051301,cell division; GO:0051302,regulation of cell division; GO:0090708,specification of plant organ axis polarity; GO:1905392,plant organ morphogenesis; GO:2000067,regulation of root morphogenesis; 	--	NP_683277.1 UPSTREAM OF FLC protein (DUF966) [Arabidopsis thaliana]
AT1G05680	6.54	13.61	45.84	45.23	AT1G05680	GO:0008194,UDP-glycosyltransferase activity; GO:0010016,shoot system morphogenesis; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0042631,cellular response to water deprivation; GO:0052638,indole-3-butyrate beta-glucosyltransferase activity; GO:0070301,cellular response to hydrogen peroxide; GO:0071215,cellular response to abscisic acid stimulus; GO:0071475,cellular hyperosmotic salinity response; GO:0080024,indolebutyric acid metabolic process; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; 	--	NP_172059.1 Uridine diphosphate glycosyltransferase 74E2 [Arabidopsis thaliana]
AT1G06260	106.25	127.51	50.36	47.50	AT1G06260	GO:0004197,cysteine-type endopeptidase activity; GO:0005615,extracellular space; GO:0005764,lysosome; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0051603,proteolysis involved in protein catabolic process; 	--	NP_563764.1 Cysteine proteinases superfamily protein [Arabidopsis thaliana]
AT1G06400	34.19	40.35	57.54	79.30	AT1G06400	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005576,extracellular region; GO:0005768,endosome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009733,response to auxin; GO:0015031,protein transport; GO:0016020,membrane; GO:0016192,vesicle-mediated transport; GO:0042546,cell wall biogenesis; 	--	NP_172128.1 Ras-related small GTP-binding family protein [Arabidopsis thaliana]
AT1G06520	37.32	39.99	22.65	25.66	AT1G06520	GO:0004366,glycerol-3-phosphate O-acyltransferase activity; GO:0005739,mitochondrion; GO:0006629,lipid metabolic process; GO:0008654,phospholipid biosynthetic process; GO:0010143,cutin biosynthetic process; GO:0016020,membrane; GO:0016024,CDP-diacylglycerol biosynthetic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016791,phosphatase activity; GO:0048235,pollen sperm cell differentiation; GO:0090447,glycerol-3-phosphate 2-O-acyltransferase activity; GO:0102420,sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity; 	GPAT; glycerol-3-phosphate acyltransferase [EC:2.3.1.15 2.3.1.198]; K13508; 	NP_563768.1 glycerol-3-phosphate acyltransferase 1 [Arabidopsis thaliana]
AT1G06560	6.25	6.58	11.62	14.94	AT1G06560	GO:0001510,RNA methylation; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042254,ribosome biogenesis; 	--	NP_172143.3 NOL1/NOP2/sun family protein [Arabidopsis thaliana]
AT1G06690	40.08	47.69	22.62	24.87	AT1G06690	GO:0004033,aldo-keto reductase (NADP) activity; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0016491,oxidoreductase activity; 	--	NP_563770.1 NAD(P)-linked oxidoreductase superfamily protein [Arabidopsis thaliana]
AT1G06720	15.58	17.55	42.93	35.91	AT1G06720	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000479,endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0030686,90S preribosome; GO:0034511,U3 snoRNA binding; GO:0042254,ribosome biogenesis; 	BMS1; ribosome biogenesis protein BMS1; K14569; 	NP_001322900.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT1G06770	2.89	1.31	4.17	8.83	AT1G06770	GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0009414,response to water deprivation; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0051865,protein autoubiquitination; 	--	NP_973775.1 DREB2A-interacting protein 1 [Arabidopsis thaliana]
AT1G06820	23.14	22.47	28.91	44.88	AT1G06820	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009662,etioplast organization; GO:0016020,membrane; GO:0016116,carotenoid metabolic process; GO:0016117,carotenoid biosynthetic process; GO:0016491,oxidoreductase activity; GO:0016853,isomerase activity; GO:0031969,chloroplast membrane; GO:0046608,carotenoid isomerase activity; 	crtISO, crtH; prolycopene isomerase [EC:5.2.1.13]; K09835; 	NP_172167.2 carotenoid isomerase [Arabidopsis thaliana]
AT1G06900	15.16	17.00	21.95	28.64	AT1G06900	GO:0004222,metalloendopeptidase activity; GO:0005829,cytosol; GO:0006508,proteolysis; GO:0008150,biological_process; GO:0008233,peptidase activity; GO:0008237,metallopeptidase activity; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	--	KAG7645369.1 Peptidase M16 C-terminal [Arabidopsis thaliana x Arabidopsis arenosa]
AT1G07020	51.71	52.20	97.28	95.75	AT1G07020	GO:0008150,biological_process; 	--	NP_563775.1 hypothetical protein AT1G07020 [Arabidopsis thaliana]
AT1G07050	17.65	21.05	41.64	36.15	AT1G07050	GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_001320785.1 CCT motif family protein [Arabidopsis thaliana]
AT1G07070	39.39	55.45	73.66	126.69	AT1G07070	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0042273,ribosomal large subunit biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-L35Ae, RPL35A; large subunit ribosomal protein L35Ae; K02917; 	NP_172188.1 Ribosomal protein L35Ae family protein [Arabidopsis thaliana]
AT1G07180	13.91	16.46	31.04	32.26	AT1G07180	GO:0003954,NADH dehydrogenase activity; GO:0003959,NADPH dehydrogenase activity; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005759,mitochondrial matrix; GO:0005777,peroxisome; GO:0006116,NADH oxidation; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0071482,cellular response to light stimulus; 	ndh; NADH:ubiquinone reductase (H+-translocating) [EC:7.1.1.2]; K03885; 	NP_563783.1 alternative NAD(P)H dehydrogenase 1 [Arabidopsis thaliana]
AT1G07270	1.22	0.67	2.86	4.81	AT1G07270	GO:0003688,DNA replication origin binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006260,DNA replication; GO:0006270,DNA replication initiation; GO:0007049,cell cycle; GO:0033314,mitotic DNA replication checkpoint signaling; GO:0051301,cell division; 	CDC6; cell division control protein 6; K02213; 	NP_172207.2 Cell division control, Cdc6 [Arabidopsis thaliana]
AT1G07320	227.71	260.52	115.38	140.20	AT1G07320	GO:0000311,plastid large ribosomal subunit; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005840,ribosome; GO:0006412,translation; GO:0008266,poly(U) RNA binding; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009547,plastid ribosome; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L4, MRPL4, rplD; large subunit ribosomal protein L4; K02926; 	NP_563786.1 ribosomal protein L4 [Arabidopsis thaliana]
AT1G07340	18.47	15.14	9.24	7.82	AT1G07340	GO:0005515,protein binding; GO:0008643,carbohydrate transport; GO:0009555,pollen development; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_172214.5 sugar transporter 2 [Arabidopsis thaliana]
AT1G07400	25.21	36.94	12.10	12.81	AT1G07400	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006457,protein folding; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0009408,response to heat; GO:0009651,response to salt stress; GO:0042542,response to hydrogen peroxide; GO:0043621,protein self-association; GO:0051082,unfolded protein binding; GO:0051259,protein complex oligomerization; GO:0071456,cellular response to hypoxia; 	HSP20; HSP20 family protein; K13993; 	NP_172220.1 HSP20-like chaperones superfamily protein [Arabidopsis thaliana]
AT1G07615	3.48	3.30	8.42	12.59	AT1G07615	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005739,mitochondrion; GO:0042254,ribosome biogenesis; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; 	--	NP_001077476.1 GTP-binding protein Obg/CgtA [Arabidopsis thaliana]
AT1G07620	1.35	0.89	0.00	0.00	AT1G07620	GO:0003674,molecular_function; 	--	NP_001322857.1 GTP-binding protein Obg/CgtA [Arabidopsis thaliana]
AT1G07670	22.94	27.00	20.55	11.30	AT1G07670	GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005388,P-type calcium transporter activity; GO:0005524,ATP binding; GO:0005576,extracellular region; GO:0005783,endoplasmic reticulum; GO:0006811,ion transport; GO:0006816,calcium ion transport; GO:0006874,cellular calcium ion homeostasis; GO:0015662,P-type ion transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0034220,ion transmembrane transport; GO:0046872,metal ion binding; GO:0070588,calcium ion transmembrane transport; GO:0110165,cellular anatomical entity; 	ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]; K01537; 	NP_001321027.1 endomembrane-type CA-ATPase 4 [Arabidopsis thaliana]
AT1G07770	312.39	304.68	625.95	635.82	AT1G07770	GO:0000325,plant-type vacuole; GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S15Ae, RPS15A; small subunit ribosomal protein S15Ae; K02957; 	NP_001318947.1 ribosomal protein S15A [Arabidopsis thaliana]
AT1G07840	41.92	38.88	76.77	48.90	AT1G07840	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674,molecular_function; GO:0005730,nucleolus; GO:0032040,small-subunit processome; 	--	NP_563798.1 Sas10/Utp3/C1D family [Arabidopsis thaliana]
AT1G07940	47.55	59.13	128.73	105.40	AT1G07940	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0003746,translation elongation factor activity; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006412,translation; GO:0006414,translational elongation; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0048471,perinuclear region of cytoplasm; 	EEF1A; elongation factor 1-alpha; K03231; 	EFH68683.1 T6D22.2 [Arabidopsis lyrata subsp. lyrata]
AT1G08135	0.69	1.08	0.00	0.00	AT1G08135	GO:0006811,ion transport; GO:0006812,cation transport; GO:0006813,potassium ion transport; GO:0006885,regulation of pH; GO:0012505,endomembrane system; GO:0015297,antiporter activity; GO:0015299,solute:proton antiporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:1902600,proton transmembrane transport; 	--	NP_849610.2 cation/H+ exchanger 6B [Arabidopsis thaliana]
AT1G08160	48.90	42.14	65.36	76.21	AT1G08160	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_849612.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT1G08200	235.69	241.00	164.69	150.17	AT1G08200	GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0016831,carboxy-lyase activity; GO:0048046,apoplast; GO:0071555,cell wall organization; 	AXS; UDP-apiose/xylose synthase; K12449; 	NP_563807.1 UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis thaliana]
AT1G08410	24.22	28.81	48.81	47.06	AT1G08410	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006364,rRNA processing; GO:0016787,hydrolase activity; GO:0042254,ribosome biogenesis; GO:0043022,ribosome binding; GO:0048366,leaf development; GO:0048825,cotyledon development; GO:0090070,positive regulation of ribosome biogenesis; GO:2000012,regulation of auxin polar transport; 	LSG1; large subunit GTPase 1 [EC:3.6.1.-]; K14539; 	NP_172317.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT1G08465	21.53	18.56	50.47	32.05	AT1G08465	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0007275,multicellular organism development; GO:0010158,abaxial cell fate specification; GO:0032502,developmental process; GO:0045165,cell fate commitment; GO:0046872,metal ion binding; 	--	NP_001077490.1 Plant-specific transcription factor YABBY family protein [Arabidopsis thaliana]
AT1G08700	18.58	17.96	8.92	11.15	AT1G08700	GO:0000139,Golgi membrane; GO:0004175,endopeptidase activity; GO:0004190,aspartic-type endopeptidase activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0005798,Golgi-associated vesicle; GO:0005886,plasma membrane; GO:0006508,proteolysis; GO:0007219,Notch signaling pathway; GO:0008233,peptidase activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016485,protein processing; GO:0016787,hydrolase activity; GO:0043231,intracellular membrane-bounded organelle; 	PSEN1, PS1; presenilin 1 [EC:3.4.23.-]; K04505; 	NP_172346.1 Presenilin-1 [Arabidopsis thaliana]
AT1G08910	3.86	4.03	7.59	7.84	AT1G08910	GO:0008270,zinc ion binding; 	PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]; K04706; 	NP_172366.3 zinc ion binding protein [Arabidopsis thaliana]
AT1G09250	37.55	36.73	69.22	54.23	AT1G09250	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0046983,protein dimerization activity; 	--	NP_563839.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Arabidopsis thaliana]
AT1G09340	130.35	134.35	57.33	56.93	AT1G09340	GO:0000272,polysaccharide catabolic process; GO:0000325,plant-type vacuole; GO:0000427,plastid-encoded plastid RNA polymerase complex; GO:0003677,DNA binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0006364,rRNA processing; GO:0007623,circadian rhythm; GO:0009409,response to cold; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009611,response to wounding; GO:0009658,chloroplast organization; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0010297,heteropolysaccharide binding; GO:0010319,stromule; GO:0010468,regulation of gene expression; GO:0019843,rRNA binding; GO:0032544,plastid translation; GO:0042631,cellular response to water deprivation; GO:0045727,positive regulation of translation; GO:0045893,positive regulation of DNA-templated transcription; GO:0048046,apoplast; 	--	NP_001322308.1 chloroplast RNA binding protein [Arabidopsis thaliana]
AT1G09590	268.84	346.46	831.69	701.99	AT1G09590	GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L21e, RPL21; large subunit ribosomal protein L21e; K02889; 	NP_563847.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT1G09750	94.41	94.80	60.49	54.63	AT1G09750	GO:0000166,nucleotide binding; GO:0004190,aspartic-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0009627,systemic acquired resistance; GO:0016787,hydrolase activity; GO:0043067,regulation of programmed cell death; GO:0048046,apoplast; GO:0099503,secretory vesicle; 	--	NP_563851.1 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT1G09760	44.36	41.54	78.29	87.34	AT1G09760	GO:0000398,mRNA splicing, via spliceosome; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0015030,Cajal body; GO:0030620,U2 snRNA binding; GO:1990904,ribonucleoprotein complex; 	SNRPA1; U2 small nuclear ribonucleoprotein A'; K11092; 	NP_172447.1 U2 small nuclear ribonucleoprotein A [Arabidopsis thaliana]
AT1G09770	41.77	33.62	62.96	63.32	AT1G09770	GO:0000398,mRNA splicing, via spliceosome; GO:0000974,Prp19 complex; GO:0002376,immune system process; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0006281,DNA repair; GO:0006355,regulation of DNA-templated transcription; GO:0006397,mRNA processing; GO:0006952,defense response; GO:0006974,cellular response to DNA damage stimulus; GO:0007049,cell cycle; GO:0008380,RNA splicing; GO:0042742,defense response to bacterium; GO:0045087,innate immune response; GO:0050832,defense response to fungus; 	CDC5L, CDC5, CEF1; pre-mRNA-splicing factor CDC5/CEF1; K12860; 	NP_172448.1 cell division cycle 5 [Arabidopsis thaliana]
AT1G09780	195.80	223.82	106.44	112.21	AT1G09780	GO:0003824,catalytic activity; GO:0004619,phosphoglycerate mutase activity; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0005740,mitochondrial envelope; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006007,glucose catabolic process; GO:0006096,glycolytic process; GO:0009409,response to cold; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009555,pollen development; GO:0009637,response to blue light; GO:0009737,response to abscisic acid; GO:0010037,response to carbon dioxide; GO:0010118,stomatal movement; GO:0016853,isomerase activity; GO:0030145,manganese ion binding; GO:0044262,cellular carbohydrate metabolic process; GO:0046537,2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity; GO:0046872,metal ion binding; 	gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]; K15633; 	NP_563852.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [Arabidopsis thaliana]
AT1G09880	10.09	7.96	5.37	2.84	AT1G09880	GO:0003824,catalytic activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0016829,lyase activity; GO:0030246,carbohydrate binding; GO:0102210,rhamnogalacturonan endolyase activity; GO:1901575,organic substance catabolic process; 	RGL4, rhiE; rhamnogalacturonan endolyase [EC:4.2.2.23]; K18195; 	NP_001322798.1 Rhamnogalacturonate lyase family protein [Arabidopsis thaliana]
AT1G10180	16.84	14.83	24.69	25.54	AT1G10180	GO:0000145,exocyst; GO:0006887,exocytosis; GO:0006893,Golgi to plasma membrane transport; GO:0008104,protein localization; GO:0060321,acceptance of pollen; 	--	NP_563863.1 LOW protein: exocyst complex component-like protein [Arabidopsis thaliana]
AT1G10395	23.24	20.44	58.92	77.47	AT1G10395	--	--	NP_001320683.1 hypothetical protein AT1G10395 [Arabidopsis thaliana]
AT1G10490	17.61	16.10	30.50	31.48	AT1G10490	GO:0000049,tRNA binding; GO:0000154,rRNA modification; GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006807,nitrogen compound metabolic process; GO:0008033,tRNA processing; GO:0008080,N-acetyltransferase activity; GO:0016072,rRNA metabolic process; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0034470,ncRNA processing; GO:0042274,ribosomal small subunit biogenesis; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0051391,tRNA acetylation; GO:1904812,rRNA acetylation involved in maturation of SSU-rRNA; GO:1990883,rRNA cytidine N-acetyltransferase activity; 	NAT10, KRE33; N-acetyltransferase 10 [EC:2.3.1.-]; K14521; 	NP_001318971.1 GNAT acetyltransferase (DUF699) [Arabidopsis thaliana]
AT1G10500	87.16	99.59	64.63	60.72	AT1G10500	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016226,iron-sulfur cluster assembly; GO:0030674,protein-macromolecule adaptor activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; 	--	NP_172520.1 chloroplast-localized ISCA-like protein [Arabidopsis thaliana]
AT1G10820	8.14	5.97	24.32	24.57	AT1G10820	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_172552.2 hypothetical protein (DUF3755) [Arabidopsis thaliana]
AT1G10960	555.59	496.58	246.10	387.23	AT1G10960	GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; 	petF; ferredoxin; K02639; 	NP_172565.1 ferredoxin 1 [Arabidopsis thaliana]
AT1G11125	2.06	3.87	6.77	13.59	AT1G11125	GO:0003674,molecular_function; 	--	NP_001184959.1 hypothetical protein AT1G11125 [Arabidopsis thaliana]
AT1G11240	17.48	18.36	45.33	44.60	AT1G11240	GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0008150,biological_process; 	--	NP_563886.1 ribosomal RNA-processing protein [Arabidopsis thaliana]
AT1G11260	101.99	96.17	157.43	165.34	AT1G11260	GO:0000325,plant-type vacuole; GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0008643,carbohydrate transport; GO:0009506,plasmodesma; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_172592.1 sugar transporter 1 [Arabidopsis thaliana]
AT1G11475	267.91	267.04	476.49	359.50	AT1G11475	GO:0000418,RNA polymerase IV complex; GO:0000419,RNA polymerase V complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005665,RNA polymerase II, core complex; GO:0005666,RNA polymerase III complex; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0006360,transcription by RNA polymerase I; GO:0006366,transcription by RNA polymerase II; GO:0008270,zinc ion binding; GO:0042797,tRNA transcription by RNA polymerase III; GO:0046872,metal ion binding; 	RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5; K03007; 	NP_849640.1 RNA polymerases N / 8 kDa subunit [Arabidopsis thaliana]
AT1G11610	7.34	2.80	1.51	1.11	AT1G11610	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	CYP71A13; indoleacetaldoxime dehydratase [EC:4.99.1.6]; K11868; 	KAG7596690.1 Cytochrome P450 superfamily [Arabidopsis suecica]
AT1G11770	32.72	39.16	23.88	21.00	AT1G11770	GO:0000166,nucleotide binding; GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0016491,oxidoreductase activity; GO:0016899,oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor; GO:0050660,flavin adenine dinucleotide binding; GO:0071949,FAD binding; 	--	NP_172642.3 FAD-binding Berberine family protein [Arabidopsis thaliana]
AT1G11860	328.96	306.29	216.21	199.85	AT1G11860	GO:0003729,mRNA binding; GO:0004047,aminomethyltransferase activity; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005739,mitochondrion; GO:0006546,glycine catabolic process; GO:0008483,transaminase activity; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016740,transferase activity; GO:0019464,glycine decarboxylation via glycine cleavage system; GO:0022626,cytosolic ribosome; GO:0048046,apoplast; 	gcvT, AMT; aminomethyltransferase [EC:2.1.2.10]; K00605; 	NP_001318983.1 Glycine cleavage T-protein family [Arabidopsis thaliana]
AT1G12080	650.06	821.92	349.59	428.61	AT1G12080	GO:0005576,extracellular region; GO:0005829,cytosol; 	--	NP_849650.1 Vacuolar calcium-binding protein-like protein [Arabidopsis thaliana]
AT1G12090	1432.34	1433.07	808.57	883.34	AT1G12090	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_172673.1 extensin-like protein [Arabidopsis thaliana]
AT1G12140	26.15	25.00	17.61	14.15	AT1G12140	GO:0004497,monooxygenase activity; GO:0004499,N,N-dimethylaniline monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0019761,glucosinolate biosynthetic process; GO:0046620,regulation of organ growth; GO:0046885,regulation of hormone biosynthetic process; GO:0048444,floral organ morphogenesis; GO:0050660,flavin adenine dinucleotide binding; GO:0050661,NADP binding; GO:0080107,8-methylthiopropyl glucosinolate S-oxygenase activity; 	GS-OX; aliphatic glucosinolate S-oxygenase [EC:1.14.13.237]; K22324; 	NP_001323223.1 flavin-monooxygenase glucosinolate S-oxygenase 5 [Arabidopsis thaliana]
AT1G12380	25.67	32.97	17.57	18.76	AT1G12380	GO:0003674,molecular_function; 	--	NP_172700.1 hypothetical protein AT1G12380 [Arabidopsis thaliana]
AT1G12640	64.27	59.51	40.81	37.17	AT1G12640	GO:0005576,extracellular region; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0006629,lipid metabolic process; GO:0008654,phospholipid biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019375,galactolipid biosynthetic process; GO:0019432,triglyceride biosynthetic process; GO:0030258,lipid modification; GO:0045017,glycerolipid biosynthetic process; GO:0047184,1-acylglycerophosphocholine O-acyltransferase activity; GO:0071617,lysophospholipid acyltransferase activity; GO:0106262,1-acylglycerophosphoethanolamine O-acyltransferase activity; GO:0106263,1-acylglycerophosphoserine O-acyltransferase activity; 	LPT1, ALE1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-]; K13519; 	NP_172724.2 MBOAT (membrane bound O-acyl transferase) family protein [Arabidopsis thaliana]
AT1G12650	15.05	9.65	33.43	47.62	AT1G12650	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000469,cleavage involved in rRNA processing; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0030686,90S preribosome; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	--	NP_001031031.1 rRNA biogenesis RRP36-like protein [Arabidopsis thaliana]
AT1G12900	478.44	469.51	282.39	280.18	AT1G12900	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0004365,glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity; GO:0005576,extracellular region; GO:0006006,glucose metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016620,oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0019253,reductive pentose-phosphate cycle; GO:0047100,glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity; GO:0048046,apoplast; GO:0050661,NADP binding; GO:0051287,NAD binding; GO:1901149,salicylic acid binding; 	GAPA; glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]; K05298; 	NP_001321059.1 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 [Arabidopsis thaliana]
AT1G13000	10.07	8.98	4.93	2.46	AT1G13000	GO:0000138,Golgi trans cisterna; GO:0016020,membrane; 	--	NP_001031034.1 transmembrane protein, putative (DUF707) [Arabidopsis thaliana]
AT1G13110	1.08	1.02	4.01	10.88	AT1G13110	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_172770.1 cytochrome P450, family 71 subfamily B, polypeptide 7 [Arabidopsis thaliana]
AT1G13140	36.64	37.70	16.19	21.35	AT1G13140	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_172773.4 cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana]
AT1G13160	42.01	32.20	70.56	71.67	AT1G13160	GO:0000055,ribosomal large subunit export from nucleus; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0015031,protein transport; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_172775.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT1G13210	4.02	3.35	10.74	10.45	AT1G13210	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0005215,transporter activity; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0015914,phospholipid transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0045332,phospholipid translocation; GO:0046872,metal ion binding; GO:0140326,ATPase-coupled intramembrane lipid transporter activity; GO:1901703,protein localization involved in auxin polar transport; 	E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1]; K01530; 	NP_172780.1 autoinhibited Ca2+/ATPase II [Arabidopsis thaliana]
AT1G13220	8.33	7.59	12.78	11.91	AT1G13220	GO:0005634,nucleus; GO:0005652,nuclear lamina; GO:0005654,nucleoplasm; GO:0005737,cytoplasm; GO:0006997,nucleus organization; GO:0016020,membrane; GO:0031965,nuclear membrane; GO:0031981,nuclear lumen; GO:0034399,nuclear periphery; GO:0097298,regulation of nucleus size; 	--	NP_001322783.1 nuclear matrix constituent protein-like protein [Arabidopsis thaliana]
AT1G13230	0.92	0.81	5.03	5.78	AT1G13230	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0009610,response to symbiotic fungus; GO:0016020,membrane; GO:0044403,biological process involved in symbiotic interaction; 	--	NP_172782.2 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT1G13280	165.07	155.18	76.31	117.38	AT1G13280	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009695,jasmonic acid biosynthetic process; GO:0016853,isomerase activity; GO:0046423,allene-oxide cyclase activity; 	AOC; allene oxide cyclase [EC:5.3.99.6]; K10525; 	NP_172786.1 allene oxide cyclase 4 [Arabidopsis thaliana]
AT1G13910	9.28	14.58	4.14	4.91	AT1G13910	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0016020,membrane; 	--	NP_001323054.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT1G14010	100.46	91.07	45.42	71.96	AT1G14010	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005793,endoplasmic reticulum-Golgi intermediate compartment; GO:0005794,Golgi apparatus; GO:0006886,intracellular protein transport; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0007030,Golgi organization; GO:0015031,protein transport; GO:0016020,membrane; GO:0016192,vesicle-mediated transport; GO:0030134,COPII-coated ER to Golgi transport vesicle; GO:0032580,Golgi cisterna membrane; 	TMED10, ERV25; p24 family protein delta-1; K20352; 	NP_172854.1 emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana]
AT1G14350	9.09	7.54	2.72	3.18	AT1G14350	GO:0000976,transcription cis-regulatory region binding; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0007049,cell cycle; GO:0009553,embryo sac development; GO:0009554,megasporogenesis; GO:0009629,response to gravity; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0009737,response to abscisic acid; GO:0009926,auxin polar transport; GO:0010052,guard cell differentiation; GO:0010235,guard mother cell cytokinesis; GO:0010376,stomatal complex formation; GO:0010444,guard mother cell differentiation; GO:0032875,regulation of DNA endoreduplication; GO:0043565,sequence-specific DNA binding; GO:0050891,multicellular organismal water homeostasis; GO:0080022,primary root development; GO:0090436,leaf pavement cell development; GO:1901002,positive regulation of response to salt stress; GO:1901333,positive regulation of lateral root development; GO:1902584,positive regulation of response to water deprivation; GO:1902806,regulation of cell cycle G1/S phase transition; GO:2000037,regulation of stomatal complex patterning; 	--	NP_001077534.1 Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana]
AT1G14360	43.75	47.57	28.80	27.00	AT1G14360	GO:0000139,Golgi membrane; GO:0005459,UDP-galactose transmembrane transporter activity; GO:0005460,UDP-glucose transmembrane transporter activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0008643,carbohydrate transport; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0015297,antiporter activity; GO:0015786,UDP-glucose transmembrane transport; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0055085,transmembrane transport; GO:0072334,UDP-galactose transmembrane transport; 	--	NP_563949.1 UDP-galactose transporter 3 [Arabidopsis thaliana]
AT1G14520	9.97	11.70	20.23	20.56	AT1G14520	GO:0005506,iron ion binding; GO:0005737,cytoplasm; GO:0016491,oxidoreductase activity; GO:0019310,inositol catabolic process; GO:0019853,L-ascorbic acid biosynthetic process; GO:0046872,metal ion binding; GO:0050113,inositol oxygenase activity; 	MIOX; inositol oxygenase [EC:1.13.99.1]; K00469; 	NP_001320937.1 myo-inositol oxygenase 1 [Arabidopsis thaliana]
AT1G14580	4.87	4.25	11.54	7.69	AT1G14580	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008356,asymmetric cell division; GO:0009507,chloroplast; GO:0009536,plastid; GO:0046872,metal ion binding; GO:0048364,root development; 	--	NP_001320583.1 C2H2-like zinc finger protein [Arabidopsis thaliana]
AT1G14640	0.21	0.12	0.31	2.95	AT1G14640	GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005686,U2 snRNP; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0045292,mRNA cis splicing, via spliceosome; GO:0071004,U2-type prespliceosome; GO:0071013,catalytic step 2 spliceosome; 	SF3A1, SAP114; splicing factor 3A subunit 1; K12825; 	AAF63169.1 T5E21.13 [Arabidopsis thaliana]
AT1G14700	7.42	5.13	1.22	2.36	AT1G14700	GO:0000325,plant-type vacuole; GO:0003993,acid phosphatase activity; GO:0005576,extracellular region; GO:0008198,ferrous iron binding; GO:0008199,ferric iron binding; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	ACP5; tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]; K14379; 	NP_001320701.1 purple acid phosphatase 3 [Arabidopsis thaliana]
AT1G14980	413.32	574.04	773.55	776.83	AT1G14980	GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005576,extracellular region; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0006457,protein folding; GO:0009408,response to heat; GO:0046872,metal ion binding; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051087,chaperone binding; GO:0140662,ATP-dependent protein folding chaperone; 	--	NP_563961.1 chaperonin 10 [Arabidopsis thaliana]
AT1G14990	62.83	78.09	124.32	152.21	AT1G14990	GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_172952.2 transmembrane protein [Arabidopsis thaliana]
AT1G15040	37.66	41.19	20.21	19.14	AT1G15040	GO:0005575,cellular_component; GO:0006541,glutamine metabolic process; GO:0016740,transferase activity; GO:0016787,hydrolase activity; GO:0016811,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; GO:2000032,regulation of secondary shoot formation; 	--	NP_850943.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]
AT1G15120	62.20	79.15	127.97	163.65	AT1G15120	GO:0005576,extracellular region; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005750,mitochondrial respiratory chain complex III; GO:0005829,cytosol; GO:0006122,mitochondrial electron transport, ubiquinol to cytochrome c; GO:0016020,membrane; GO:0070469,respirasome; 	QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6; K00416; 	NP_172964.1 Ubiquinol-cytochrome C reductase hinge protein [Arabidopsis thaliana]
AT1G15440	18.38	22.58	36.70	30.98	AT1G15440	GO:0000028,ribosomal small subunit assembly; GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009553,embryo sac development; GO:0009744,response to sucrose; GO:0010119,regulation of stomatal movement; GO:0032040,small-subunit processome; GO:0034388,Pwp2p-containing subcomplex of 90S preribosome; GO:0042254,ribosome biogenesis; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:1990904,ribonucleoprotein complex; 	PWP2, UTP1; periodic tryptophan protein 2; K14558; 	NP_172998.1 periodic tryptophan protein 2 [Arabidopsis thaliana]
AT1G15460	17.67	18.46	9.58	10.91	AT1G15460	GO:0005452,solute:inorganic anion antiporter activity; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006820,anion transport; GO:0015698,inorganic anion transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0035445,borate transmembrane transport; GO:0046713,borate transport; GO:0050801,ion homeostasis; GO:0055085,transmembrane transport; GO:0080029,cellular response to boron-containing substance levels; GO:0080139,borate efflux transmembrane transporter activity; 	--	NP_001319010.1 HCO3- transporter family [Arabidopsis thaliana]
AT1G16000	50.27	36.50	85.33	94.74	AT1G16000	GO:0009527,plastid outer membrane; GO:0016020,membrane; 	--	VYS46232.1 unnamed protein product [Arabidopsis thaliana]
AT1G16020	8.79	7.40	33.96	12.20	AT1G16020	GO:0005085,guanyl-nucleotide exchange factor activity; GO:0005515,protein binding; GO:0005768,endosome; GO:0016192,vesicle-mediated transport; GO:0035658,Mon1-Ccz1 complex; GO:0043231,intracellular membrane-bounded organelle; GO:0050790,regulation of catalytic activity; 	--	NP_563989.1 vacuolar fusion protein (DUF1712) [Arabidopsis thaliana]
AT1G16080	45.02	44.83	20.42	23.49	AT1G16080	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0048046,apoplast; 	--	NP_563991.1 nuclear protein [Arabidopsis thaliana]
AT1G16410	0.57	1.10	6.78	3.70	AT1G16410	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0009625,response to insect; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0019761,glucosinolate biosynthetic process; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0103096,CYP79F1 dihomomethionine monooxygenase activity; GO:0103097,CYP79F1 trihomomethionine monooxygenase activity; 	CYP79F1; homomethionine N-monooxygenase [EC:1.14.14.42]; K12154; 	NP_563996.2 cytochrome p450 79f1 [Arabidopsis thaliana]
AT1G16430	3.10	5.68	14.15	17.24	AT1G16430	GO:0003712,transcription coregulator activity; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0016592,mediator complex; 	--	NP_563997.1 Surfeit locus protein 5 subunit 22 of Mediator complex [Arabidopsis thaliana]
AT1G16470	93.65	104.75	68.16	61.89	AT1G16470	GO:0000502,proteasome complex; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005839,proteasome core complex; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0010043,response to zinc ion; GO:0010498,proteasomal protein catabolic process; GO:0019773,proteasome core complex, alpha-subunit complex; GO:0022626,cytosolic ribosome; GO:0051603,proteolysis involved in protein catabolic process; 	PSMA2; 20S proteasome subunit alpha 2 [EC:3.4.25.1]; K02726; 	NP_001031057.1 proteasome subunit PAB1 [Arabidopsis thaliana]
AT1G16480	0.65	0.72	0.00	0.00	AT1G16480	GO:0005515,protein binding; GO:0008150,biological_process; GO:0008270,zinc ion binding; 	--	NP_001185013.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT1G17430	16.65	17.01	8.44	7.82	AT1G17430	GO:0003674,molecular_function; GO:0016020,membrane; 	--	NP_564022.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT1G17470	33.39	40.99	61.87	52.06	AT1G17470	GO:0000166,nucleotide binding; GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0008289,lipid binding; GO:0019003,GDP binding; GO:0031410,cytoplasmic vesicle; GO:0070300,phosphatidic acid binding; 	K06944; uncharacterized protein; K06944; 	NP_001077555.1 developmentally regulated G-protein 1 [Arabidopsis thaliana]
AT1G17490	32.04	33.01	69.22	87.13	AT1G17490	GO:0005634,nucleus; GO:0008150,biological_process; 	--	NP_564026.1 epidermal patterning factor-like protein [Arabidopsis thaliana]
AT1G17510	22.86	18.14	62.19	42.32	AT1G17510	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0008150,biological_process; 	--	NP_564027.1 hypothetical protein AT1G17510 [Arabidopsis thaliana]
AT1G17560	19.52	13.91	30.20	42.85	AT1G17560	GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005762,mitochondrial large ribosomal subunit; GO:0005840,ribosome; GO:0006412,translation; GO:0009553,embryo sac development; GO:0009741,response to brassinosteroid; GO:0019843,rRNA binding; GO:0048481,plant ovule development; GO:0060548,negative regulation of cell death; GO:0070180,large ribosomal subunit rRNA binding; GO:0080060,integument development; GO:1990904,ribonucleoprotein complex; 	RP-L14, MRPL14, rplN; large subunit ribosomal protein L14; K02874; 	NP_001321333.1 Ribosomal protein L14p/L23e family protein [Arabidopsis thaliana]
AT1G17960	0.17	0.00	2.45	1.58	AT1G17960	GO:0000166,nucleotide binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004829,threonine-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006435,threonyl-tRNA aminoacylation; GO:0009507,chloroplast; GO:0016874,ligase activity; 	TARS, thrS; threonyl-tRNA synthetase [EC:6.1.1.3]; K01868; 	NP_173238.1 Threonyl-tRNA synthetase [Arabidopsis thaliana]
AT1G18150	33.09	39.14	27.07	20.34	AT1G18150	GO:0000165,MAPK cascade; GO:0000166,nucleotide binding; GO:0000302,response to reactive oxygen species; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004707,MAP kinase activity; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006468,protein phosphorylation; GO:0009611,response to wounding; GO:0009753,response to jasmonic acid; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0035556,intracellular signal transduction; GO:0042542,response to hydrogen peroxide; GO:0106310,protein serine kinase activity; 	MPK8; mitogen-activated protein kinase 8 [EC:2.7.11.24]; K20538; 	NP_001185027.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT1G18170	25.82	24.57	9.07	9.33	AT1G18170	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0016853,isomerase activity; 	--	NP_564048.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT1G18280	245.08	177.84	110.62	139.01	AT1G18280	GO:0005886,plasma membrane; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016020,membrane; GO:0016787,hydrolase activity; 	--	NP_173264.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT1G18440	12.71	11.45	23.79	24.00	AT1G18440	GO:0004045,aminoacyl-tRNA hydrolase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016787,hydrolase activity; 	--	NP_173279.2 Peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
AT1G18520	26.42	26.19	12.41	16.48	AT1G18520	GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009734,auxin-activated signaling pathway; GO:0016020,membrane; GO:0016021,integral component of membrane; 	--	NP_564056.1 tetraspanin11 [Arabidopsis thaliana]
AT1G18960	11.66	14.49	3.65	4.69	AT1G18960	GO:0003700,DNA-binding transcription factor activity; GO:0006355,regulation of DNA-templated transcription; 	--	NP_173330.1 myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana]
AT1G19110	17.79	20.12	12.96	11.87	AT1G19110	GO:0003674,molecular_function; GO:0005634,nucleus; 	--	NP_173345.2 inter-alpha-trypsin inhibitor heavy chain-like protein [Arabidopsis thaliana]
AT1G19150	34.01	22.80	17.02	11.21	AT1G19150	GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0046872,metal ion binding; 	LHCA2; light-harvesting complex I chlorophyll a/b binding protein 2; K08908; 	NP_173349.1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) [Arabidopsis thaliana]
AT1G19640	32.44	35.65	12.11	24.47	AT1G19640	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009611,response to wounding; GO:0009694,jasmonic acid metabolic process; GO:0016740,transferase activity; GO:0030795,methyl jasmonate methylesterase activity; GO:0031408,oxylipin biosynthetic process; GO:0032259,methylation; GO:0046872,metal ion binding; 	E2.1.1.141; jasmonate O-methyltransferase [EC:2.1.1.141]; K08241; 	NP_173394.1 jasmonic acid carboxyl methyltransferase [Arabidopsis thaliana]
AT1G19960	26.43	14.53	0.00	0.00	AT1G19960	GO:0003674,molecular_function; GO:0005575,cellular_component; 	--	NP_173425.2 transcription factor [Arabidopsis thaliana]
AT1G20050	92.39	92.35	59.25	56.81	AT1G20050	GO:0000247,C-8 sterol isomerase activity; GO:0004769,steroid delta-isomerase activity; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016125,sterol metabolic process; GO:0016126,sterol biosynthetic process; GO:0016853,isomerase activity; GO:0047750,cholestenol delta-isomerase activity; 	EBP; cholestenol Delta-isomerase [EC:5.3.3.5]; K01824; 	NP_173433.1 C-8,7 sterol isomerase [Arabidopsis thaliana]
AT1G20120	80.03	89.67	26.79	28.35	AT1G20120	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_564104.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT1G20180	3.60	2.20	10.64	6.29	AT1G20180	GO:0016020,membrane; 	--	NP_173445.2 transmembrane protein (DUF677) [Arabidopsis thaliana]
AT1G20340	6313.27	5826.06	2983.47	3710.65	AT1G20340	GO:0005507,copper ion binding; GO:0005634,nucleus; GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0016020,membrane; GO:0017148,negative regulation of translation; GO:0019904,protein domain specific binding; GO:0022900,electron transport chain; GO:0031977,thylakoid lumen; GO:0046028,electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; GO:0046688,response to copper ion; GO:0046872,metal ion binding; GO:0055035,plastid thylakoid membrane; GO:0055070,copper ion homeostasis; 	petE; plastocyanin; K02638; 	NP_173459.1 Cupredoxin superfamily protein [Arabidopsis thaliana]
AT1G20370	13.21	15.14	22.91	26.55	AT1G20370	GO:0001522,pseudouridine synthesis; GO:0003723,RNA binding; GO:0008033,tRNA processing; GO:0009451,RNA modification; GO:0009982,pseudouridine synthase activity; GO:0016853,isomerase activity; GO:0031119,tRNA pseudouridine synthesis; GO:0043231,intracellular membrane-bounded organelle; 	--	NP_564112.1 Pseudouridine synthase family protein [Arabidopsis thaliana]
AT1G20510	14.73	12.25	28.35	22.43	AT1G20510	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005777,peroxisome; GO:0009611,response to wounding; GO:0009617,response to bacterium; GO:0009695,jasmonic acid biosynthetic process; GO:0009753,response to jasmonic acid; GO:0016020,membrane; GO:0016405,CoA-ligase activity; GO:0016874,ligase activity; GO:0102391,decanoate-CoA ligase activity; 	OPCL1; OPC-8:0 CoA ligase 1 [EC:6.2.1.-]; K10526; 	NP_001322647.1 OPC-8:0 CoA ligase1 [Arabidopsis thaliana]
AT1G20570	15.03	7.65	3.87	7.47	AT1G20570	GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0000922,spindle pole; GO:0000923,equatorial microtubule organizing center; GO:0000930,gamma-tubulin complex; GO:0005737,cytoplasm; GO:0005815,microtubule organizing center; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0007020,microtubule nucleation; GO:0031122,cytoplasmic microtubule organization; GO:0043015,gamma-tubulin binding; GO:0051011,microtubule minus-end binding; GO:0051225,spindle assembly; GO:0051321,meiotic cell cycle; 	--	NP_001322745.1 Spc97 / Spc98 family of spindle pole body (SBP) component [Arabidopsis thaliana]
AT1G20680	1.68	3.70	5.65	14.01	AT1G20680	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_001185046.1 transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]
AT1G21000	56.60	35.79	82.43	67.33	AT1G21000	--	--	NP_564128.1 PLATZ transcription factor family protein [Arabidopsis thaliana]
AT1G21140	21.76	13.24	4.48	4.32	AT1G21140	GO:0005381,iron ion transmembrane transporter activity; GO:0005384,manganese ion transmembrane transporter activity; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0006811,ion transport; GO:0006879,cellular iron ion homeostasis; GO:0006880,intracellular sequestering of iron ion; GO:0010039,response to iron ion; GO:0016020,membrane; GO:0030026,cellular manganese ion homeostasis; GO:0034755,iron ion transmembrane transport; GO:0055072,iron ion homeostasis; GO:0071421,manganese ion transmembrane transport; 	--	NP_173538.2 Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]
AT1G21160	2.64	1.26	30.46	29.37	AT1G21160	GO:0000166,nucleotide binding; GO:0003743,translation initiation factor activity; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006413,translational initiation; GO:0008150,biological_process; 	EIF5B; translation initiation factor 5B; K03243; 	NP_173540.2 eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]
AT1G21190	82.08	84.08	242.18	265.60	AT1G21190	GO:0000290,deadenylation-dependent decapping of nuclear-transcribed mRNA; GO:0000398,mRNA splicing, via spliceosome; GO:0000932,P-body; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005688,U6 snRNP; GO:0005737,cytoplasm; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0033962,P-body assembly; GO:0046540,U4/U6 x U5 tri-snRNP complex; GO:0071011,precatalytic spliceosome; GO:0071013,catalytic step 2 spliceosome; GO:0120114,Sm-like protein family complex; GO:0120115,Lsm2-8 complex; GO:1990726,Lsm1-7-Pat1 complex; GO:1990904,ribonucleoprotein complex; 	LSM3; U6 snRNA-associated Sm-like protein LSm3; K12622; 	NP_173542.1 Small nuclear ribonucleoprotein family protein [Arabidopsis thaliana]
AT1G21540	66.05	76.80	37.36	35.69	AT1G21540	GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0016874,ligase activity; 	--	NP_173573.1 AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana]
AT1G21750	170.60	194.90	125.12	108.52	AT1G21750	GO:0000325,plant-type vacuole; GO:0000326,protein storage vacuole; GO:0000327,lytic vacuole within protein storage vacuole; GO:0003756,protein disulfide isomerase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005773,vacuole; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0006457,protein folding; GO:0009579,thylakoid; GO:0009793,embryo development ending in seed dormancy; GO:0010043,response to zinc ion; GO:0016853,isomerase activity; GO:0034976,response to endoplasmic reticulum stress; GO:0043067,regulation of programmed cell death; GO:0048316,seed development; GO:0099503,secretory vesicle; 	PDIA1, P4HB; protein disulfide-isomerase A1 [EC:5.3.4.1]; K09580; 	NP_173594.1 PDI-like 1-1 [Arabidopsis thaliana]
AT1G21780	28.42	24.41	52.63	34.93	AT1G21780	GO:0005515,protein binding; GO:0016567,protein ubiquitination; 	SPOP; speckle-type POZ protein; K10523; 	NP_001077574.1 BTB/POZ domain-containing protein [Arabidopsis thaliana]
AT1G21866	4.98	8.22	0.00	0.00	AT1G21866	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001077577.1 Plant thionin family protein [Arabidopsis thaliana]
AT1G22150	0.47	1.29	0.00	0.00	AT1G22150	GO:0005886,plasma membrane; GO:0008271,secondary active sulfate transmembrane transporter activity; GO:0008272,sulfate transport; GO:0015116,sulfate transmembrane transporter activity; GO:0015293,symporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:1902358,sulfate transmembrane transport; 	--	NP_001319061.1 sulfate transporter 1;3 [Arabidopsis thaliana]
AT1G22380	55.90	53.89	34.50	34.89	AT1G22380	GO:0008194,UDP-glycosyltransferase activity; GO:0015020,glucuronosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; 	UGT85A; UDP-glucosyltransferase 85A [EC:2.4.1.-]; K23452; 	NP_173655.2 UDP-glucosyl transferase 85A3 [Arabidopsis thaliana]
AT1G22430	6.25	7.45	3.34	0.66	AT1G22430	GO:0004022,alcohol dehydrogenase (NAD+) activity; GO:0004024,alcohol dehydrogenase activity, zinc-dependent; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008270,zinc ion binding; GO:0016491,oxidoreductase activity; GO:0018455,alcohol dehydrogenase [NAD(P)+] activity; GO:0046294,formaldehyde catabolic process; GO:0046872,metal ion binding; GO:0051903,S-(hydroxymethyl)glutathione dehydrogenase activity; 	frmA, ADH5, adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]; K00121; 	NP_001321091.1 GroES-like zinc-binding dehydrogenase family protein [Arabidopsis thaliana]
AT1G22710	127.57	133.69	89.46	76.11	AT1G22710	GO:0005634,nucleus; GO:0005773,vacuole; GO:0005886,plasma membrane; GO:0005887,integral component of plasma membrane; GO:0005985,sucrose metabolic process; GO:0008506,sucrose:proton symporter activity; GO:0008515,sucrose transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:0015293,symporter activity; GO:0015770,sucrose transport; GO:0016020,membrane; GO:0055085,transmembrane transport; 	--	NP_173685.1 sucrose-proton symporter 2 [Arabidopsis thaliana]
AT1G22780	412.94	468.45	793.26	701.28	AT1G22780	GO:0000325,plant-type vacuole; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0006413,translational initiation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S18e, RPS18; small subunit ribosomal protein S18e; K02964; 	NP_173692.1 Ribosomal protein S13/S18 family [Arabidopsis thaliana]
AT1G22940	13.29	10.34	22.15	17.70	AT1G22940	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0004789,thiamine-phosphate diphosphorylase activity; GO:0005524,ATP binding; GO:0008152,metabolic process; GO:0008902,hydroxymethylpyrimidine kinase activity; GO:0008972,phosphomethylpyrimidine kinase activity; GO:0009228,thiamine biosynthetic process; GO:0009229,thiamine diphosphate biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0046872,metal ion binding; 	thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]; K14153; 	NP_173707.2 thiamin biosynthesis protein [Arabidopsis thaliana]
AT1G23205	39.05	38.75	55.15	68.79	AT1G23205	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; 	--	NP_173734.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT1G23260	54.52	41.57	74.28	89.13	AT1G23260	GO:0000209,protein polyubiquitination; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006301,postreplication repair; GO:0031372,UBC13-MMS2 complex; GO:0070534,protein K63-linked ubiquitination; GO:1902916,positive regulation of protein polyubiquitination; 	UBE2V; ubiquitin-conjugating enzyme E2 variant; K10704; 	NP_564191.1 MMS ZWEI homologue 1 [Arabidopsis thaliana]
AT1G23280	28.52	26.54	44.77	50.42	AT1G23280	GO:0000460,maturation of 5.8S rRNA; GO:0000470,maturation of LSU-rRNA; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030687,preribosome, large subunit precursor; 	--	NP_173742.1 MAK16 protein-like protein [Arabidopsis thaliana]
AT1G23290	728.37	756.75	1187.57	1191.26	AT1G23290	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0010229,inflorescence development; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L27Ae, RPL27A; large subunit ribosomal protein L27Ae; K02900; 	NP_173743.1 Ribosomal protein L18e/L15 superfamily protein [Arabidopsis thaliana]
AT1G23390	20.96	26.29	15.38	12.81	AT1G23390	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; 	--	NP_564193.1 Kelch repeat-containing F-box family protein [Arabidopsis thaliana]
AT1G23410	7.46	13.67	71.64	44.21	AT1G23410	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0016567,protein ubiquitination; GO:0019941,modification-dependent protein catabolic process; GO:0022627,cytosolic small ribosomal subunit; GO:0031386,protein tag; GO:0031625,ubiquitin protein ligase binding; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S27Ae, RPS27A, UBA80; ubiquitin-small subunit ribosomal protein S27Ae; K02977; 	NP_173755.1 Ribosomal protein S27a / Ubiquitin family protein [Arabidopsis thaliana]
AT1G23520	21.37	22.29	10.66	9.64	AT1G23520	--	--	NP_001323392.1 hypothetical protein (DUF220) [Arabidopsis thaliana]
AT1G23740	73.86	80.29	43.60	41.85	AT1G23740	GO:0005634,nucleus; GO:0008270,zinc ion binding; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0016491,oxidoreductase activity; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0035671,enone reductase activity; GO:0035798,2-alkenal reductase (NADP+) activity; GO:0048046,apoplast; 	EO, FaQR; 2-methylene-furan-3-one reductase [EC:1.3.1.105]; K18980; 	NP_173786.1 Oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana]
AT1G24000	5.71	4.88	0.00	0.00	AT1G24000	GO:0006952,defense response; 	--	NP_173811.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein [Arabidopsis thaliana]
AT1G24050	41.32	60.40	102.96	77.28	AT1G24050	GO:0003674,molecular_function; GO:0005575,cellular_component; 	--	NP_173816.2 RNA-processing, Lsm domain-containing protein [Arabidopsis thaliana]
AT1G24190	9.52	10.46	20.23	13.80	AT1G24190	GO:0000118,histone deacetylase complex; GO:0000122,negative regulation of transcription by RNA polymerase II; GO:0000785,chromatin; GO:0003714,transcription corepressor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009737,response to abscisic acid; GO:0016575,histone deacetylation; GO:0016580,Sin3 complex; GO:0045892,negative regulation of DNA-templated transcription; 	SIN3A; paired amphipathic helix protein Sin3a; K11644; 	NP_001185080.1 SIN3-like 3 [Arabidopsis thaliana]
AT1G24210	0.50	1.10	8.65	12.05	AT1G24210	GO:0000118,histone deacetylase complex; GO:0000122,negative regulation of transcription by RNA polymerase II; GO:0000785,chromatin; GO:0003714,transcription corepressor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0016575,histone deacetylation; GO:0045892,negative regulation of DNA-templated transcription; 	--	NP_564212.1 Paired amphipathic helix (PAH2) superfamily protein [Arabidopsis thaliana]
AT1G24400	25.80	33.01	11.71	14.07	AT1G24400	GO:0003333,amino acid transmembrane transport; GO:0005886,plasma membrane; GO:0006865,amino acid transport; GO:0015171,amino acid transmembrane transporter activity; GO:0015172,acidic amino acid transmembrane transporter activity; GO:0015293,symporter activity; GO:0015800,acidic amino acid transport; GO:0016020,membrane; 	--	NP_564217.1 lysine histidine transporter 2 [Arabidopsis thaliana]
AT1G24490	17.03	15.79	38.92	41.65	AT1G24490	GO:0005515,protein binding; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0010027,thylakoid membrane organization; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0032977,membrane insertase activity; GO:0051205,protein insertion into membrane; GO:0072598,protein localization to chloroplast; GO:0090150,establishment of protein localization to membrane; 	yidC, spoIIIJ, OXA1, ccfA; YidC/Oxa1 family membrane protein insertase; K03217; 	NP_173858.5 OxaA/YidC-like membrane insertion protein [Arabidopsis thaliana]
AT1G24625	1.12	0.41	9.11	2.07	AT1G24625	GO:0000976,transcription cis-regulatory region binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009738,abscisic acid-activated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0019760,glucosinolate metabolic process; GO:0046872,metal ion binding; GO:0046982,protein heterodimerization activity; 	--	NP_564223.1 zinc finger protein 7 [Arabidopsis thaliana]
AT1G25260	131.71	106.20	187.79	178.30	AT1G25260	GO:0000027,ribosomal large subunit assembly; GO:0000956,nuclear-transcribed mRNA catabolic process; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0022626,cytosolic ribosome; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042255,ribosome assembly; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_564226.1 Ribosomal protein L10 family protein [Arabidopsis thaliana]
AT1G25280	38.00	35.03	54.48	70.03	AT1G25280	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006355,regulation of DNA-templated transcription; GO:0009536,plastid; GO:0009620,response to fungus; GO:0016567,protein ubiquitination; 	TULP1; tubby-related protein 1; K19600; 	NP_173899.1 tubby like protein 10 [Arabidopsis thaliana]
AT1G26120	31.93	26.99	53.53	64.87	AT1G26120	GO:0000139,Golgi membrane; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0010296,prenylcysteine methylesterase activity; GO:0016020,membrane; GO:0016787,hydrolase activity; 	PCME; prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-]; K15889; 	NP_173937.2 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT1G26320	5.55	10.73	2.56	2.05	AT1G26320	GO:0005634,nucleus; GO:0006979,response to oxidative stress; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0032440,2-alkenal reductase [NAD(P)+] activity; 	E1.3.1.74; 2-alkenal reductase [EC:1.3.1.74]; K08070; 	NP_001185098.1 Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]
AT1G26580	3.00	1.39	6.83	6.15	AT1G26580	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001321647.1 ELM2 domain protein [Arabidopsis thaliana]
AT1G26720	45.02	31.81	15.22	19.56	AT1G26720	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_173994.1 transmembrane protein [Arabidopsis thaliana]
AT1G26880	216.03	230.08	346.21	339.16	AT1G26880	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-L34e, RPL34; large subunit ribosomal protein L34e; K02915; 	NP_174010.1 Ribosomal protein L34e superfamily protein [Arabidopsis thaliana]
AT1G26920	46.23	46.37	67.23	93.08	AT1G26920	--	--	NP_564266.1 zinc finger CCHC domain protein [Arabidopsis thaliana]
AT1G27030	13.56	13.25	34.36	32.08	AT1G27030	GO:0005575,cellular_component; 	--	NP_564270.1 hypothetical protein AT1G27030 [Arabidopsis thaliana]
AT1G27330	161.85	120.67	78.25	67.06	AT1G27330	GO:0005783,endoplasmic reticulum; GO:0006486,protein glycosylation; GO:0006979,response to oxidative stress; GO:0015031,protein transport; GO:0016020,membrane; GO:0030968,endoplasmic reticulum unfolded protein response; 	--	NP_564277.1 Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana]
AT1G27400	168.11	145.48	291.69	299.01	AT1G27400	GO:0000325,plant-type vacuole; GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005773,vacuole; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L17e, RPL17; large subunit ribosomal protein L17e; K02880; 	NP_174060.1 Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana]
AT1G27410	10.34	12.99	6.65	2.39	AT1G27410	GO:0005634,nucleus; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; 	--	NP_174061.1 DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]
AT1G27450	209.35	187.63	339.03	347.05	AT1G27450	GO:0003999,adenine phosphoribosyltransferase activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006166,purine ribonucleoside salvage; GO:0006168,adenine salvage; GO:0007623,circadian rhythm; GO:0009505,plant-type cell wall; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009690,cytokinin metabolic process; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0044209,AMP salvage; 	APRT, apt; adenine phosphoribosyltransferase [EC:2.4.2.7]; K00759; 	NP_564284.1 adenine phosphoribosyl transferase 1 [Arabidopsis thaliana]
AT1G27470	12.42	11.22	21.50	19.79	AT1G27470	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0010073,meristem maintenance; GO:0035266,meristem growth; 	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4; K14548; 	NP_174067.2 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT1G27640	7.39	9.86	35.72	22.47	AT1G27640	GO:0003674,molecular_function; 	--	NP_174085.1 hypothetical protein AT1G27640 [Arabidopsis thaliana]
AT1G27695	157.04	150.21	314.22	282.92	AT1G27695	GO:0005319,lipid transporter activity; GO:0005515,protein binding; GO:0006869,lipid transport; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009666,plastid outer membrane organization; GO:0009667,plastid inner membrane organization; GO:0009941,chloroplast envelope; GO:0010441,guard cell development; GO:0016020,membrane; GO:0020037,heme binding; GO:0031969,chloroplast membrane; GO:0043231,intracellular membrane-bounded organelle; GO:1901965,endoplasmic reticulum to chloroplast transport; GO:1990052,ER to chloroplast lipid transport; 	--	NP_001031097.1 glycine-rich protein [Arabidopsis thaliana]
AT1G27710	86.90	98.73	26.40	16.29	AT1G27710	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_174092.1 Glycine-rich protein family [Arabidopsis thaliana]
AT1G27960	17.90	15.45	29.79	22.34	AT1G27960	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005737,cytoplasm; GO:0061157,mRNA destabilization; 	--	NP_174117.2 evolutionarily conserved C-terminal region 9 [Arabidopsis thaliana]
AT1G27980	19.92	25.99	16.30	12.21	AT1G27980	GO:0003824,catalytic activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006665,sphingolipid metabolic process; GO:0008117,sphinganine-1-phosphate aldolase activity; GO:0016020,membrane; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0019752,carboxylic acid metabolic process; GO:0030149,sphingolipid catabolic process; GO:0030170,pyridoxal phosphate binding; GO:1901564,organonitrogen compound metabolic process; 	SGPL1, DPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]; K01634; 	NP_174119.1 dihydrosphingosine phosphate lyase [Arabidopsis thaliana]
AT1G28395	34.11	30.15	119.60	53.54	AT1G28395	GO:0005739,mitochondrion; GO:0008150,biological_process; 	--	NP_001185107.1 hypothetical protein AT1G28395 [Arabidopsis thaliana]
AT1G28430	27.53	36.83	15.51	16.34	AT1G28430	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_174165.1 cytochrome P450, family 705, subfamily A, polypeptide 24 [Arabidopsis thaliana]
AT1G28540	21.78	23.93	53.00	72.30	AT1G28540	GO:0005741,mitochondrial outer membrane; GO:0009527,plastid outer membrane; GO:0016020,membrane; 	--	NP_564312.1 transmembrane protein [Arabidopsis thaliana]
AT1G29140	500.36	400.73	161.53	208.50	AT1G29140	--	--	NP_174209.1 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]
AT1G29395	111.27	98.37	52.76	76.14	AT1G29395	GO:0009507,chloroplast; GO:0009528,plastid inner membrane; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009631,cold acclimation; GO:0009706,chloroplast inner membrane; GO:0009737,response to abscisic acid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0042631,cellular response to water deprivation; GO:0070417,cellular response to cold; 	--	NP_564328.1 COLD REGULATED 314 INNER MEMBRANE 1 [Arabidopsis thaliana]
AT1G29640	52.06	79.75	117.27	165.12	AT1G29640	GO:0005737,cytoplasm; GO:0009617,response to bacterium; GO:0009646,response to absence of light; GO:0010150,leaf senescence; 	--	NP_174257.1 senescence regulator (Protein of unknown function, DUF584) [Arabidopsis thaliana]
AT1G29900	100.97	96.53	173.55	167.97	AT1G29900	GO:0000166,nucleotide binding; GO:0004088,carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005951,carbamoyl-phosphate synthase complex; GO:0006221,pyrimidine nucleotide biosynthetic process; GO:0006526,arginine biosynthetic process; GO:0006541,glutamine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016036,cellular response to phosphate starvation; GO:0016740,transferase activity; GO:0016874,ligase activity; GO:0044205,'de novo' UMP biosynthetic process; GO:0046872,metal ion binding; 	carB, CPA2; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]; K01955; 	NP_564338.1 carbamoyl phosphate synthetase B [Arabidopsis thaliana]
AT1G29940	13.12	14.49	30.72	21.59	AT1G29940	GO:0000428,DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0009561,megagametogenesis; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0032549,ribonucleoside binding; GO:0042254,ribosome biogenesis; GO:0046872,metal ion binding; 	RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]; K03002; 	NP_564341.2 nuclear RNA polymerase A2 [Arabidopsis thaliana]
AT1G30170	2.77	1.40	9.19	7.09	AT1G30170	--	--	NP_174309.1 hypothetical protein (DUF295) [Arabidopsis thaliana]
AT1G30240	10.94	12.54	18.61	20.96	AT1G30240	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0006364,rRNA processing; GO:0008150,biological_process; 	--	NP_001077628.1 proline-, glutamic acid/leucine-rich protein [Arabidopsis thaliana]
AT1G30280	13.43	10.07	29.58	27.20	AT1G30280	GO:0005737,cytoplasm; GO:0030276,clathrin binding; GO:0031982,vesicle; GO:0043231,intracellular membrane-bounded organelle; GO:0072318,clathrin coat disassembly; GO:0072583,clathrin-dependent endocytosis; 	--	NP_001322470.1 Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]
AT1G30350	104.55	82.11	49.99	67.40	AT1G30350	GO:0016829,lyase activity; GO:0030570,pectate lyase activity; GO:0045490,pectin catabolic process; GO:0046872,metal ion binding; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_174324.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT1G30590	9.51	13.27	23.87	16.65	AT1G30590	GO:0001042,RNA polymerase I core binding; GO:0001181,RNA polymerase I general transcription initiation factor activity; GO:0003743,translation initiation factor activity; GO:0005634,nucleus; GO:0006361,transcription initiation at RNA polymerase I promoter; GO:0006413,translational initiation; 	--	NP_001320918.1 RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana]
AT1G30710	51.82	37.75	32.77	20.93	AT1G30710	GO:0000166,nucleotide binding; GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0016491,oxidoreductase activity; GO:0050660,flavin adenine dinucleotide binding; GO:0071949,FAD binding; 	--	NP_174358.1 FAD-binding Berberine family protein [Arabidopsis thaliana]
AT1G31130	53.12	60.51	36.68	26.94	AT1G31130	GO:0003674,molecular_function; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0016020,membrane; 	--	NP_564374.1 polyadenylate-binding protein 1-B-binding protein [Arabidopsis thaliana]
AT1G31660	123.20	120.56	199.44	180.02	AT1G31660	GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0006364,rRNA processing; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0030515,snoRNA binding; GO:0030688,preribosome, small subunit precursor; GO:0042254,ribosome biogenesis; GO:0043229,intracellular organelle; 	--	NP_174447.2 bystin-like protein [Arabidopsis thaliana]
AT1G31812	603.78	523.32	373.73	382.50	AT1G31812	GO:0000062,fatty-acyl-CoA binding; GO:0001666,response to hypoxia; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006631,fatty acid metabolic process; GO:0006869,lipid transport; GO:0008289,lipid binding; GO:0009409,response to cold; GO:0009646,response to absence of light; GO:0016020,membrane; GO:0031210,phosphatidylcholine binding; GO:0050826,response to freezing; 	--	NP_174462.1 acyl-CoA-binding protein 6 [Arabidopsis thaliana]
AT1G32080	84.64	81.15	48.24	49.61	AT1G32080	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009658,chloroplast organization; GO:0009706,chloroplast inner membrane; GO:0009737,response to abscisic acid; GO:0009853,photorespiration; GO:0009941,chloroplast envelope; GO:0010118,stomatal movement; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0042631,cellular response to water deprivation; GO:0043879,glycolate transmembrane transporter activity; GO:0048527,lateral root development; GO:0097339,glycolate transmembrane transport; GO:1901974,glycerate transmembrane transporter activity; GO:1901975,glycerate transmembrane transport; 	--	NP_564388.1 membrane protein [Arabidopsis thaliana]
AT1G32250	13.09	5.14	1.35	0.87	AT1G32250	GO:0005509,calcium ion binding; GO:0030234,enzyme regulator activity; GO:0046872,metal ion binding; GO:0050790,regulation of catalytic activity; 	CML; calcium-binding protein CML; K13448; 	NP_174504.1 Calcium-binding EF-hand family protein [Arabidopsis thaliana]
AT1G32460	43.67	52.61	95.55	79.30	AT1G32460	--	--	NP_564403.1 hypothetical protein AT1G32460 [Arabidopsis thaliana]
AT1G32550	115.96	105.78	61.92	49.66	AT1G32550	GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; 	petF; ferredoxin; K02639; 	NP_174533.1 2Fe-2S ferredoxin-like superfamily protein [Arabidopsis thaliana]
AT1G32580	38.71	40.68	102.21	99.34	AT1G32580	GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0006397,mRNA processing; GO:0006807,nitrogen compound metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016554,cytidine to uridine editing; GO:0042803,protein homodimerization activity; GO:0043170,macromolecule metabolic process; GO:0046983,protein dimerization activity; GO:0080156,mitochondrial mRNA modification; 	--	NP_174536.1 plastid developmental protein DAG [Arabidopsis thaliana]
AT1G32640	29.66	28.20	37.31	53.99	AT1G32640	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006568,tryptophan metabolic process; GO:0009269,response to desiccation; GO:0009611,response to wounding; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009753,response to jasmonic acid; GO:0009759,indole glucosinolate biosynthetic process; GO:0009963,positive regulation of flavonoid biosynthetic process; GO:0010374,stomatal complex development; GO:0019900,kinase binding; GO:0043565,sequence-specific DNA binding; GO:0043619,regulation of transcription from RNA polymerase II promoter in response to oxidative stress; GO:0045893,positive regulation of DNA-templated transcription; GO:0046983,protein dimerization activity; GO:0051090,regulation of DNA-binding transcription factor activity; GO:0051289,protein homotetramerization; GO:0090357,regulation of tryptophan metabolic process; GO:0106167,extracellular ATP signaling; GO:2000068,regulation of defense response to insect; GO:2000652,regulation of secondary cell wall biogenesis; 	MYC2; transcription factor MYC2; K13422; 	NP_174541.1 Basic helix-loop-helix (bHLH) DNA-binding family protein [Arabidopsis thaliana]
AT1G32780	15.42	16.30	5.41	8.79	AT1G32780	GO:0004022,alcohol dehydrogenase (NAD+) activity; GO:0004024,alcohol dehydrogenase activity, zinc-dependent; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008270,zinc ion binding; GO:0016491,oxidoreductase activity; GO:0018455,alcohol dehydrogenase [NAD(P)+] activity; GO:0046294,formaldehyde catabolic process; GO:0046872,metal ion binding; GO:0051903,S-(hydroxymethyl)glutathione dehydrogenase activity; 	E1.1.1.1, adh; alcohol dehydrogenase [EC:1.1.1.1]; K00001; 	NP_564409.1 GroES-like zinc-binding dehydrogenase family protein [Arabidopsis thaliana]
AT1G32870	6.36	12.15	23.69	16.38	AT1G32870	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006355,regulation of DNA-templated transcription; GO:0010114,response to red light; GO:0010224,response to UV-B; GO:0016020,membrane; GO:0031930,mitochondria-nucleus signaling pathway; GO:1900409,positive regulation of cellular response to oxidative stress; 	--	NP_001323024.1 NAC domain protein 13 [Arabidopsis thaliana]
AT1G32920	17.79	10.87	46.99	47.59	AT1G32920	GO:0009611,response to wounding; 	--	NP_001319130.1 hypothetical protein AT1G32920 [Arabidopsis thaliana]
AT1G33430	76.68	76.66	38.57	46.38	AT1G33430	GO:0000139,Golgi membrane; GO:0005794,Golgi apparatus; GO:0006486,protein glycosylation; GO:0008194,UDP-glycosyltransferase activity; GO:0008378,galactosyltransferase activity; GO:0010407,non-classical arabinogalactan protein metabolic process; GO:0010584,pollen exine formation; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0048531,beta-1,3-galactosyltransferase activity; 	--	NP_001185130.1 Galactosyltransferase family protein [Arabidopsis thaliana]
AT1G33560	7.63	6.43	12.13	16.70	AT1G33560	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0006952,defense response; GO:0009414,response to water deprivation; GO:0009626,plant-type hypersensitive response; GO:0016301,kinase activity; GO:0042742,defense response to bacterium; GO:0043531,ADP binding; GO:0051707,response to other organism; 	--	NP_174620.2 Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]
AT1G33811	83.15	52.98	106.12	122.39	AT1G33811	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_564430.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT1G33980	12.24	13.80	27.13	31.01	AT1G33980	GO:0000184,nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0006952,defense response; GO:0009611,response to wounding; GO:0009863,salicylic acid mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0042742,defense response to bacterium; GO:0045727,positive regulation of translation; GO:0048571,long-day photoperiodism; GO:0051028,mRNA transport; 	UPF3, RENT3; regulator of nonsense transcripts 3; K14328; 	NP_174660.2 Smg-4/UPF3 family protein [Arabidopsis thaliana]
AT1G34060	39.38	30.89	74.18	89.75	AT1G34060	GO:0003824,catalytic activity; GO:0006520,cellular amino acid metabolic process; GO:0008483,transaminase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016846,carbon-sulfur lyase activity; 	--	NP_564435.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Arabidopsis thaliana]
AT1G34270	6.21	8.08	1.41	2.42	AT1G34270	GO:0000139,Golgi membrane; GO:0005794,Golgi apparatus; GO:0006486,protein glycosylation; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; 	--	OAP12259.1 hypothetical protein AXX17_AT1G35140 [Arabidopsis thaliana]
AT1G34470	6.14	6.05	11.58	25.86	AT1G34470	GO:0005768,endosome; GO:0005769,early endosome; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0015095,magnesium ion transmembrane transporter activity; GO:0015693,magnesium ion transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:1903830,magnesium ion transmembrane transport; 	--	NP_564447.1 magnesium transporter, putative (DUF803) [Arabidopsis thaliana]
AT1G34640	47.14	34.80	16.21	15.63	AT1G34640	GO:0003674,molecular_function; GO:0005783,endoplasmic reticulum; GO:0005787,signal peptidase complex; GO:0005789,endoplasmic reticulum membrane; GO:0006465,signal peptide processing; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0048658,anther wall tapetum development; 	--	NP_564450.1 peptidase [Arabidopsis thaliana]
AT1G35680	163.61	200.41	97.21	108.62	AT1G35680	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009658,chloroplast organization; GO:0009793,embryo development ending in seed dormancy; GO:0009941,chloroplast envelope; GO:0010027,thylakoid membrane organization; GO:0019843,rRNA binding; GO:0043229,intracellular organelle; GO:1990904,ribonucleoprotein complex; 	RP-L21, MRPL21, rplU; large subunit ribosomal protein L21; K02888; 	NP_174808.1 Ribosomal protein L21 [Arabidopsis thaliana]
AT1G36180	1.88	1.21	5.32	4.14	AT1G36180	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0003989,acetyl-CoA carboxylase activity; GO:0004075,biotin carboxylase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008152,metabolic process; GO:0016874,ligase activity; GO:0046872,metal ion binding; GO:2001295,malonyl-CoA biosynthetic process; 	ACACA; acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14 2.1.3.15]; K11262; 	NP_001117417.1 acetyl-CoA carboxylase 2 [Arabidopsis thaliana]
AT1G36675	46.16	36.38	196.95	172.56	AT1G36675	GO:0008150,biological_process; 	--	NP_683354.1 glycine-rich protein [Arabidopsis thaliana]
AT1G36730	29.64	30.43	54.71	54.88	AT1G36730	GO:0000166,nucleotide binding; GO:0001731,formation of translation preinitiation complex; GO:0001732,formation of cytoplasmic translation initiation complex; GO:0003743,translation initiation factor activity; GO:0005092,GDP-dissociation inhibitor activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005829,cytosol; GO:0006412,translation; GO:0006413,translational initiation; GO:0050790,regulation of catalytic activity; GO:0071074,eukaryotic initiation factor eIF2 binding; 	EIF5; translation initiation factor 5; K03262; 	NP_174877.1 Translation initiation factor IF2/IF5 [Arabidopsis thaliana]
AT1G42440	42.39	44.65	69.98	78.86	AT1G42440	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000479,endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030688,preribosome, small subunit precursor; GO:0034511,U3 snoRNA binding; GO:0042254,ribosome biogenesis; 	--	NP_564480.1 pre-rRNA-processing TSR1-like protein [Arabidopsis thaliana]
AT1G42480	32.90	39.81	17.23	8.61	AT1G42480	GO:0005634,nucleus; 	--	NP_564481.1 TLR4 regulator/MIR-interacting MSAP protein [Arabidopsis thaliana]
AT1G43170	601.14	614.49	967.64	903.96	AT1G43170	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L3e, RPL3; large subunit ribosomal protein L3e; K02925; 	NP_001031146.1 ribosomal protein 1 [Arabidopsis thaliana]
AT1G44224	68.33	59.57	40.24	30.54	AT1G44224	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001077678.1 ECA1 gametogenesis related family protein [Arabidopsis thaliana]
AT1G44414	0.00	0.00	9.92	2.84	AT1G44414	GO:0008150,biological_process; 	--	NP_175087.1 zinc-ribbon domain protein [Arabidopsis thaliana]
AT1G44575	627.93	658.63	276.66	254.98	AT1G44575	GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009517,PSII associated light-harvesting complex II; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0010027,thylakoid membrane organization; GO:0010196,nonphotochemical quenching; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; GO:0051738,xanthophyll binding; 	psbS; photosystem II 22kDa protein; K03542; 	NP_001319163.1 Chlorophyll A-B binding family protein [Arabidopsis thaliana]
AT1G44810	32.34	22.54	46.20	49.66	AT1G44810	GO:0000976,transcription cis-regulatory region binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0045893,positive regulation of DNA-templated transcription; GO:0046686,response to cadmium ion; 	--	NP_564491.1 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]
AT1G45010	17.74	14.78	39.14	37.08	AT1G45010	GO:0016020,membrane; GO:0016021,integral component of membrane; 	--	NP_175121.2 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana]
AT1G47480	5.45	5.45	1.07	0.92	AT1G47480	GO:0016787,hydrolase activity; GO:0052689,carboxylic ester hydrolase activity; 	--	NP_564507.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT1G47720	0.30	0.00	3.43	3.31	AT1G47720	GO:0000002,mitochondrial genome maintenance; GO:0003677,DNA binding; GO:0003697,single-stranded DNA binding; GO:0005739,mitochondrion; GO:0006260,DNA replication; GO:0006264,mitochondrial DNA replication; GO:0009295,nucleoid; GO:0042645,mitochondrial nucleoid; GO:0045910,negative regulation of DNA recombination; GO:0048046,apoplast; GO:0051096,positive regulation of helicase activity; 	--	NP_175203.2 Primosome PriB/single-strand DNA-binding protein [Arabidopsis thaliana]
AT1G47980	145.81	154.56	87.92	98.39	AT1G47980	GO:0008150,biological_process; 	--	NP_564518.1 desiccation-like protein [Arabidopsis thaliana]
AT1G48030	121.91	105.10	67.98	64.33	AT1G48030	GO:0000166,nucleotide binding; GO:0004148,dihydrolipoyl dehydrogenase activity; GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0005747,mitochondrial respiratory chain complex I; GO:0005759,mitochondrial matrix; GO:0008270,zinc ion binding; GO:0016491,oxidoreductase activity; GO:0016668,oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor; GO:0045252,oxoglutarate dehydrogenase complex; GO:0045454,cell redox homeostasis; GO:0046686,response to cadmium ion; GO:0048046,apoplast; GO:0050660,flavin adenine dinucleotide binding; GO:0050897,cobalt ion binding; 	DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4]; K00382; 	NP_001322047.1 mitochondrial lipoamide dehydrogenase 1 [Arabidopsis thaliana]
AT1G48100	35.77	32.82	16.07	11.85	AT1G48100	GO:0004650,polygalacturonase activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009831,plant-type cell wall modification involved in multidimensional cell growth; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0071555,cell wall organization; 	--	NP_175244.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT1G48170	9.64	15.05	26.29	45.07	AT1G48170	GO:0000502,proteasome complex; GO:0043248,proteasome assembly; 	--	NP_564522.1 proteasome assembly chaperone [Arabidopsis thaliana]
AT1G48450	66.41	61.83	36.92	32.31	AT1G48450	GO:0005515,protein binding; GO:0016874,ligase activity; 	--	NP_001185170.1 alanine-tRNA ligase, putative (DUF760) [Arabidopsis thaliana]
AT1G48570	43.67	35.58	64.38	63.11	AT1G48570	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005737,cytoplasm; GO:0008150,biological_process; GO:0046872,metal ion binding; 	--	NP_175290.1 zinc finger (Ran-binding) family protein [Arabidopsis thaliana]
AT1G48860	42.12	48.49	34.55	25.64	AT1G48860	GO:0003824,catalytic activity; GO:0003866,3-phosphoshikimate 1-carboxyvinyltransferase activity; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009423,chorismate biosynthetic process; GO:0009507,chloroplast; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; 	aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]; K00800; 	NP_175317.1 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta [Arabidopsis thaliana]
AT1G48920	437.23	475.48	819.23	723.54	AT1G48920	GO:0000478,endonucleolytic cleavage involved in rRNA processing; GO:0001731,formation of translation preinitiation complex; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005739,mitochondrion; GO:0006364,rRNA processing; GO:0010305,leaf vascular tissue pattern formation; GO:0010588,cotyledon vascular tissue pattern formation; GO:0033592,RNA strand annealing activity; GO:0034057,RNA strand-exchange activity; GO:0042254,ribosome biogenesis; GO:0043024,ribosomal small subunit binding; GO:0048364,root development; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0080056,petal vascular tissue pattern formation; GO:0080057,sepal vascular tissue pattern formation; GO:0097010,eukaryotic translation initiation factor 4F complex assembly; 	NCL, NSR1; nucleolin; K11294; 	NP_175322.1 nucleolin like 1 [Arabidopsis thaliana]
AT1G49410	144.83	142.02	296.54	207.70	AT1G49410	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0005741,mitochondrial outer membrane; GO:0005742,mitochondrial outer membrane translocase complex; GO:0008150,biological_process; GO:0015031,protein transport; GO:0016020,membrane; 	--	NP_564545.1 translocase of the outer mitochondrial membrane 6 [Arabidopsis thaliana]
AT1G49450	45.50	42.01	31.93	24.82	AT1G49450	GO:0005515,protein binding; 	--	NP_175369.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT1G49490	6.32	7.35	2.24	4.58	AT1G49490	GO:0005199,structural constituent of cell wall; GO:0005576,extracellular region; GO:0009860,pollen tube growth; GO:0071555,cell wall organization; 	--	NP_001320463.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT1G49740	70.94	75.58	40.31	35.35	AT1G49740	GO:0006629,lipid metabolic process; GO:0008081,phosphoric diester hydrolase activity; GO:0009506,plasmodesma; 	--	NP_564553.1 PLC-like phosphodiesterases superfamily protein [Arabidopsis thaliana]
AT1G49820	12.06	11.62	16.83	26.79	AT1G49820	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0008652,cellular amino acid biosynthetic process; GO:0009086,methionine biosynthetic process; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0019509,L-methionine salvage from methylthioadenosine; GO:0042802,identical protein binding; GO:0046522,S-methyl-5-thioribose kinase activity; 	mtnK; 5-methylthioribose kinase [EC:2.7.1.100]; K00899; 	NP_564555.1 S-methyl-5-thioribose kinase [Arabidopsis thaliana]
AT1G49950	16.09	23.95	61.66	44.20	AT1G49950	GO:0000785,chromatin; GO:0000786,nucleosome; GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0003691,double-stranded telomeric DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0006334,nucleosome assembly; GO:0006357,regulation of transcription by RNA polymerase II; GO:0032991,protein-containing complex; GO:0042803,protein homodimerization activity; GO:0043565,sequence-specific DNA binding; GO:1990841,promoter-specific chromatin binding; 	--	AAL73438.1 telomere repeat binding factor 1 [Arabidopsis thaliana]
AT1G50200	131.27	135.79	225.41	217.62	AT1G50200	GO:0000049,tRNA binding; GO:0000166,nucleotide binding; GO:0002161,aminoacyl-tRNA editing activity; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004813,alanine-tRNA ligase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006400,tRNA modification; GO:0006412,translation; GO:0006419,alanyl-tRNA aminoacylation; GO:0008270,zinc ion binding; GO:0009507,chloroplast; GO:0016597,amino acid binding; GO:0016874,ligase activity; GO:0043039,tRNA aminoacylation; GO:0046872,metal ion binding; GO:0070143,mitochondrial alanyl-tRNA aminoacylation; GO:0106074,aminoacyl-tRNA metabolism involved in translational fidelity; 	AARS, alaS; alanyl-tRNA synthetase [EC:6.1.1.7]; K01872; 	NP_001185186.2 Alanyl-tRNA synthetase [Arabidopsis thaliana]
AT1G50310	46.65	40.08	24.88	28.70	AT1G50310	GO:0008643,carbohydrate transport; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_175449.1 sugar transporter 9 [Arabidopsis thaliana]
AT1G50732	1.97	0.72	7.56	13.37	AT1G50732	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_001185189.1 transmembrane protein [Arabidopsis thaliana]
AT1G50900	91.41	72.67	50.49	42.72	AT1G50900	GO:0005515,protein binding; GO:0006886,intracellular protein transport; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0015031,protein transport; GO:0016020,membrane; GO:0090391,granum assembly; 	--	NP_564580.1 Ankyrin repeat family protein [Arabidopsis thaliana]
AT1G50920	74.84	80.98	178.60	171.07	AT1G50920	GO:0000166,nucleotide binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; 	NOG1; nucleolar GTP-binding protein; K06943; 	NP_175505.1 Nucleolar GTP-binding protein [Arabidopsis thaliana]
AT1G51110	16.95	14.03	8.23	7.41	AT1G51110	GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; 	--	NP_175522.2 Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana]
AT1G51160	82.69	50.49	106.53	113.98	AT1G51160	GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0009555,pollen development; GO:0009933,meristem structural organization; GO:0016192,vesicle-mediated transport; GO:0030008,TRAPP complex; GO:0048193,Golgi vesicle transport; 	--	NP_001031168.1 SNARE-like superfamily protein [Arabidopsis thaliana]
AT1G51400	140.14	117.92	59.92	81.09	AT1G51400	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0009535,chloroplast thylakoid membrane; GO:0009611,response to wounding; GO:0010193,response to ozone; GO:0010224,response to UV-B; GO:0019904,protein domain specific binding; 	--	NP_564589.1 Photosystem II 5 kD protein [Arabidopsis thaliana]
AT1G51610	31.55	26.80	52.80	49.25	AT1G51610	GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005783,endoplasmic reticulum; GO:0006812,cation transport; GO:0006829,zinc ion transport; GO:0006882,cellular zinc ion homeostasis; GO:0008324,cation transmembrane transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:0098655,cation transmembrane transport; 	--	NP_564594.1 Cation efflux family protein [Arabidopsis thaliana]
AT1G51650	281.59	284.10	438.84	490.84	AT1G51650	GO:0000275,mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1); GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005753,mitochondrial proton-transporting ATP synthase complex; GO:0006754,ATP biosynthetic process; GO:0006811,ion transport; GO:0015986,proton motive force-driven ATP synthesis; GO:0016020,membrane; GO:0042776,proton motive force-driven mitochondrial ATP synthesis; GO:0045261,proton-transporting ATP synthase complex, catalytic core F(1); GO:0046933,proton-transporting ATP synthase activity, rotational mechanism; GO:0110165,cellular anatomical entity; GO:1902600,proton transmembrane transport; 	ATPeF1E, ATP5E, ATP15; F-type H+-transporting ATPase subunit epsilon; K02135; 	NP_175576.1 ATP synthase epsilon chain [Arabidopsis thaliana]
AT1G51760	66.94	64.81	42.85	38.36	AT1G51760	GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0009611,response to wounding; GO:0009850,auxin metabolic process; GO:0010179,IAA-Ala conjugate hydrolase activity; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	--	NP_175587.1 peptidase M20/M25/M40 family protein [Arabidopsis thaliana]
AT1G52190	140.52	148.38	101.57	85.86	AT1G52190	GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0015706,nitrate transmembrane transport; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0080054,low-affinity nitrate transmembrane transporter activity; 	--	NP_175630.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT1G52220	145.48	162.84	74.56	77.67	AT1G52220	GO:0005515,protein binding; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; 	--	NP_001322106.1 CURVATURE THYLAKOID protein [Arabidopsis thaliana]
AT1G52230	575.03	607.31	318.96	356.56	AT1G52230	GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009538,photosystem I reaction center; GO:0009579,thylakoid; GO:0015979,photosynthesis; GO:0016020,membrane; 	psaH; photosystem I subunit VI; K02695; 	NP_175633.1 photosystem I subunit H2 [Arabidopsis thaliana]
AT1G52300	675.21	583.86	1147.09	1125.20	AT1G52300	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005840,ribosome; GO:0006412,translation; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-L37e, RPL37; large subunit ribosomal protein L37e; K02922; 	NP_175640.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT1G52400	2695.88	2566.32	4455.75	4836.56	AT1G52400	GO:0000325,plant-type vacuole; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0008422,beta-glucosidase activity; GO:0009414,response to water deprivation; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009625,response to insect; GO:0009651,response to salt stress; GO:0009687,abscisic acid metabolic process; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:0010119,regulation of stomatal movement; GO:0010168,ER body; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0019762,glucosinolate catabolic process; GO:0030104,water homeostasis; GO:0042802,identical protein binding; GO:0050832,defense response to fungus; GO:0051258,protein polymerization; GO:0051993,abscisic acid glucose ester beta-glucosidase activity; GO:0080119,ER body organization; 	BG1; beta-D-glucopyranosyl abscisate beta-glucosidase [EC:3.2.1.175]; K15748; 	NP_001185204.1 beta glucosidase 18 [Arabidopsis thaliana]
AT1G52570	21.47	13.44	11.10	10.52	AT1G52570	GO:0003824,catalytic activity; GO:0004630,phospholipase D activity; GO:0005509,calcium ion binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006629,lipid metabolic process; GO:0009395,phospholipid catabolic process; GO:0009738,abscisic acid-activated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0030136,clathrin-coated vesicle; GO:0031410,cytoplasmic vesicle; GO:0046470,phosphatidylcholine metabolic process; GO:0046872,metal ion binding; GO:0070290,N-acylphosphatidylethanolamine-specific phospholipase D activity; 	PLD1_2; phospholipase D1/2 [EC:3.1.4.4]; K01115; 	NP_001322920.1 phospholipase D alpha 2 [Arabidopsis thaliana]
AT1G52618	3.63	1.00	13.08	16.81	AT1G52618	GO:0003674,molecular_function; 	--	NP_001077705.1 hypothetical protein AT1G52618 [Arabidopsis thaliana]
AT1G52930	36.25	47.33	111.08	103.61	AT1G52930	GO:0000027,ribosomal large subunit assembly; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0019843,rRNA binding; GO:0042254,ribosome biogenesis; 	--	NP_564618.1 Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
AT1G52980	37.63	46.26	79.34	59.90	AT1G52980	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0042254,ribosome biogenesis; 	NUG2, GNL2; nuclear GTP-binding protein; K14537; 	CAA0290621.1 unnamed protein product [Arabidopsis thaliana]
AT1G53070	70.09	78.60	39.55	40.26	AT1G53070	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0008150,biological_process; GO:0030246,carbohydrate binding; GO:0048046,apoplast; GO:0050896,response to stimulus; 	--	NP_175715.1 Legume lectin family protein [Arabidopsis thaliana]
AT1G53200	2.67	1.82	6.78	7.54	AT1G53200	GO:0000120,RNA polymerase I transcription regulator complex; GO:0003674,molecular_function; GO:0006360,transcription by RNA polymerase I; GO:0008150,biological_process; 	--	NP_175728.2 TAF RNA polymerase I subunit A [Arabidopsis thaliana]
AT1G53310	189.43	181.87	129.56	114.43	AT1G53310	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006099,tricarboxylic acid cycle; GO:0008152,metabolic process; GO:0008964,phosphoenolpyruvate carboxylase activity; GO:0015977,carbon fixation; GO:0015979,photosynthesis; GO:0016036,cellular response to phosphate starvation; GO:0016829,lyase activity; GO:0048046,apoplast; GO:0048366,leaf development; GO:0051262,protein tetramerization; 	ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]; K01595; 	NP_001031178.1 phosphoenolpyruvate carboxylase 1 [Arabidopsis thaliana]
AT1G53480	8.86	11.06	3.48	1.49	AT1G53480	GO:0008150,biological_process; 	--	NP_001185210.1 mto 1 responding down 1 [Arabidopsis thaliana]
AT1G54040	6.75	10.64	27.88	18.75	AT1G54040	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009753,response to jasmonic acid; GO:0010150,leaf senescence; GO:0019762,glucosinolate catabolic process; GO:0030234,enzyme regulator activity; GO:0042742,defense response to bacterium; GO:0050790,regulation of catalytic activity; GO:0080028,nitrile biosynthetic process; 	--	NP_175806.3 epithiospecifier protein [Arabidopsis thaliana]
AT1G54060	14.64	16.76	24.31	29.00	AT1G54060	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006355,regulation of DNA-templated transcription; GO:0009733,response to auxin; GO:0009793,embryo development ending in seed dormancy; GO:0010431,seed maturation; GO:0043565,sequence-specific DNA binding; 	--	VYS49050.1 unnamed protein product [Arabidopsis thaliana]
AT1G54540	6.51	3.58	0.00	1.21	AT1G54540	GO:0005575,cellular_component; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_175856.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT1G54860	30.31	32.03	17.91	10.07	AT1G54860	GO:0008150,biological_process; 	--	NP_564669.1 Glycoprotein membrane precursor GPI-anchored [Arabidopsis thaliana]
AT1G55240	2.50	0.55	5.77	12.98	AT1G55240	GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_175920.2 proteinase inhibitor I4, serpin (DUF716) [Arabidopsis thaliana]
AT1G55560	23.00	23.88	9.82	8.41	AT1G55560	GO:0005507,copper ion binding; GO:0016491,oxidoreductase activity; 	E1.10.3.3; L-ascorbate oxidase [EC:1.10.3.3]; K00423; 	NP_564697.1 SKU5 similar 14 [Arabidopsis thaliana]
AT1G56045	393.49	462.19	930.14	995.54	AT1G56045	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	RP-L41e, RPL41; large subunit ribosomal protein L41e; K02928; 	--
AT1G56360	27.59	21.69	16.38	14.24	AT1G56360	GO:0003993,acid phosphatase activity; GO:0005576,extracellular region; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	ACP7; acid phosphatase type 7; K22390; 	NP_176033.1 purple acid phosphatase 6 [Arabidopsis thaliana]
AT1G56460	3.44	3.17	8.12	12.47	AT1G56460	GO:0003674,molecular_function; GO:0006338,chromatin remodeling; GO:0031011,Ino80 complex; 	--	NP_001320733.1 HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana]
AT1G56680	10.02	5.65	1.11	0.00	AT1G56680	GO:0004568,chitinase activity; GO:0005975,carbohydrate metabolic process; GO:0006032,chitin catabolic process; GO:0008061,chitin binding; GO:0016998,cell wall macromolecule catabolic process; 	E3.2.1.14; chitinase [EC:3.2.1.14]; K01183; 	NP_001320281.1 Chitinase family protein [Arabidopsis thaliana]
AT1G57660	102.71	97.80	197.70	134.09	AT1G57660	GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L21e, RPL21; large subunit ribosomal protein L21e; K02889; 	NP_564724.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT1G57750	350.81	382.64	235.36	222.42	AT1G57750	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0010025,wax biosynthetic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0080133,midchain alkane hydroxylase activity; 	MAH1, CYP96A15; midchain alkane hydroxylase; K15405; 	NP_176086.1 cytochrome P450, family 96, subfamily A, polypeptide 15 [Arabidopsis thaliana]
AT1G57860	22.25	27.05	76.35	54.34	AT1G57860	GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L21e, RPL21; large subunit ribosomal protein L21e; K02889; 	NP_564724.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT1G57990	47.34	44.56	24.74	25.89	AT1G57990	GO:0005345,purine nucleobase transmembrane transporter activity; GO:0005886,plasma membrane; GO:0006863,purine nucleobase transport; GO:0015211,purine nucleoside transmembrane transporter activity; GO:0015860,purine nucleoside transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:1904823,purine nucleobase transmembrane transport; 	--	NP_176100.1 purine permease 18 [Arabidopsis thaliana]
AT1G58055	20.50	27.90	0.00	9.04	AT1G58055	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001031204.1 Defensin-like (DEFL) family protein [Arabidopsis thaliana]
AT1G58525	2.50	1.50	11.15	4.22	AT1G58525	GO:0006629,lipid metabolic process; GO:0016298,lipase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_001154437.1 GDSL-like lipase/acylhydrolase superfamily protein [Arabidopsis thaliana]
AT1G59600	25.47	35.65	39.80	62.74	AT1G59600	--	--	NP_564748.1 ZCW7 [Arabidopsis thaliana]
AT1G59650	10.30	9.40	16.43	19.36	AT1G59650	GO:0005886,plasma membrane; 	--	NP_564750.1 CW14 protein (DUF1336) [Arabidopsis thaliana]
AT1G59740	28.89	32.62	17.29	14.41	AT1G59740	GO:0006857,oligopeptide transport; GO:0009624,response to nematode; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_176183.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT1G59760	13.42	11.02	20.36	19.45	AT1G59760	GO:0000166,nucleotide binding; GO:0000460,maturation of 5.8S rRNA; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006401,RNA catabolic process; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0019843,rRNA binding; GO:0031125,rRNA 3'-end processing; 	MTR4, SKIV2L2; ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]; K12598; 	NP_176185.1 RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana]
AT1G60640	27.94	27.69	58.06	44.53	AT1G60640	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001320731.1 stress response protein [Arabidopsis thaliana]
AT1G60950	2056.72	1694.24	877.21	1032.61	AT1G60950	GO:0005515,protein binding; GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009643,photosynthetic acclimation; GO:0009767,photosynthetic electron transport chain; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; 	petF; ferredoxin; K02639; 	NP_176291.1 2Fe-2S ferredoxin-like superfamily protein [Arabidopsis thaliana]
AT1G61240	40.29	39.80	19.94	30.89	AT1G61240	--	--	NP_001077754.1 lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]
AT1G61255	18.44	36.36	10.15	5.02	AT1G61255	--	--	CAD5315979.1 unnamed protein product [Arabidopsis thaliana]
AT1G61260	9.28	8.96	3.59	2.51	AT1G61260	GO:0016020,membrane; 	--	NP_176321.2 cotton fiber (DUF761) [Arabidopsis thaliana]
AT1G61550	5.84	5.02	12.19	7.74	AT1G61550	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0030246,carbohydrate binding; GO:0031625,ubiquitin protein ligase binding; GO:0045087,innate immune response; GO:0048544,recognition of pollen; GO:0106310,protein serine kinase activity; 	--	NP_176349.1 S-locus lectin protein kinase family protein [Arabidopsis thaliana]
AT1G61760	484.55	724.07	84.99	50.77	AT1G61760	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0098542,defense response to other organism; 	--	NP_176369.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT1G62380	2840.43	2773.47	1556.53	1515.42	AT1G62380	GO:0005507,copper ion binding; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006952,defense response; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009693,ethylene biosynthetic process; GO:0009727,detection of ethylene stimulus; GO:0009815,1-aminocyclopropane-1-carboxylate oxidase activity; GO:0010030,positive regulation of seed germination; GO:0016491,oxidoreductase activity; GO:0031418,L-ascorbic acid binding; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:0071398,cellular response to fatty acid; GO:0071732,cellular response to nitric oxide; 	E1.14.17.4; aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]; K05933; 	NP_176428.1 ACC oxidase 2 [Arabidopsis thaliana]
AT1G62480	714.10	712.49	473.46	396.95	AT1G62480	GO:0005634,nucleus; GO:0005829,cytosol; 	--	NP_564795.1 Vacuolar calcium-binding protein-like protein [Arabidopsis thaliana]
AT1G62750	138.06	138.06	80.49	88.90	AT1G62750	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003746,translation elongation factor activity; GO:0003924,GTPase activity; GO:0005524,ATP binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006414,translational elongation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009658,chloroplast organization; GO:0009791,post-embryonic development; GO:0009845,seed germination; GO:0009941,chloroplast envelope; GO:0032543,mitochondrial translation; GO:0032790,ribosome disassembly; GO:0048046,apoplast; 	--	NP_564801.1 Translation elongation factor EFG/EF2 protein [Arabidopsis thaliana]
AT1G62780	117.14	106.03	42.54	51.64	AT1G62780	GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; 	--	NP_176466.1 dimethylallyl, adenosine tRNA methylthiotransferase [Arabidopsis thaliana]
AT1G62940	79.39	81.73	28.79	46.60	AT1G62940	GO:0000166,nucleotide binding; GO:0001676,long-chain fatty acid metabolic process; GO:0004467,long-chain fatty acid-CoA ligase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0009555,pollen development; GO:0016020,membrane; GO:0016405,CoA-ligase activity; GO:0016874,ligase activity; GO:0031956,medium-chain fatty acid-CoA ligase activity; GO:0046949,fatty-acyl-CoA biosynthetic process; GO:0080110,sporopollenin biosynthetic process; 	4CL; 4-coumarate--CoA ligase [EC:6.2.1.12]; K01904; 	NP_176482.1 acyl-CoA synthetase 5 [Arabidopsis thaliana]
AT1G63050	19.11	13.63	7.97	9.62	AT1G63050	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006641,triglyceride metabolic process; GO:0008654,phospholipid biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019375,galactolipid biosynthetic process; GO:0019432,triglyceride biosynthetic process; GO:0030258,lipid modification; GO:0045017,glycerolipid biosynthetic process; GO:0047184,1-acylglycerophosphocholine O-acyltransferase activity; GO:0071617,lysophospholipid acyltransferase activity; GO:0106262,1-acylglycerophosphoethanolamine O-acyltransferase activity; GO:0106263,1-acylglycerophosphoserine O-acyltransferase activity; 	LPT1, ALE1; lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-]; K13519; 	NP_176493.1 MBOAT (membrane bound O-acyl transferase) family protein [Arabidopsis thaliana]
AT1G63060	52.94	43.21	15.85	16.50	AT1G63060	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_564808.1 ribosome biogenesis NEP1-like protein [Arabidopsis thaliana]
AT1G63220	46.44	58.00	32.68	18.56	AT1G63220	GO:0003723,RNA binding; GO:0006952,defense response; GO:0046872,metal ion binding; 	--	NP_176511.1 Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]
AT1G63300	2.35	4.08	1.31	1.12	AT1G63300	GO:0003674,molecular_function; 	--	NP_176519.1 Myosin heavy chain-related protein [Arabidopsis thaliana]
AT1G63780	26.21	24.44	53.00	53.43	AT1G63780	GO:0003729,mRNA binding; GO:0005730,nucleolus; GO:0005732,sno(s)RNA-containing ribonucleoprotein complex; GO:0006364,rRNA processing; GO:0015030,Cajal body; GO:0016363,nuclear matrix; GO:0019843,rRNA binding; GO:0030515,snoRNA binding; GO:0032040,small-subunit processome; GO:0034457,Mpp10 complex; GO:0042134,rRNA primary transcript binding; GO:1990904,ribonucleoprotein complex; 	IMP4; U3 small nucleolar ribonucleoprotein protein IMP4; K14561; 	NP_176564.1 Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
AT1G63810	9.63	10.83	18.36	18.80	AT1G63810	GO:0003674,molecular_function; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006409,tRNA export from nucleus; GO:0032040,small-subunit processome; GO:0032545,CURI complex; GO:0034456,UTP-C complex; 	UTP22, NOL6; U3 small nucleolar RNA-associated protein 22; K14544; 	NP_001320199.1 nucleolar protein [Arabidopsis thaliana]
AT1G63900	26.65	17.97	36.45	45.21	AT1G63900	GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005777,peroxisome; GO:0006996,organelle organization; GO:0009507,chloroplast; GO:0009527,plastid outer membrane; GO:0009536,plastid; GO:0009658,chloroplast organization; GO:0009707,chloroplast outer membrane; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0016558,protein import into peroxisome matrix; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0031648,protein destabilization; GO:0031999,negative regulation of fatty acid beta-oxidation; GO:0045037,protein import into chloroplast stroma; GO:0046872,metal ion binding; GO:1904215,regulation of protein import into chloroplast stroma; 	--	NP_001319312.1 E3 Ubiquitin ligase family protein [Arabidopsis thaliana]
AT1G63940	73.76	87.10	44.44	52.20	AT1G63940	GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010319,stromule; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016656,monodehydroascorbate reductase (NADH) activity; GO:0050660,flavin adenine dinucleotide binding; 	E1.6.5.4; monodehydroascorbate reductase (NADH) [EC:1.6.5.4]; K08232; 	NP_849839.1 monodehydroascorbate reductase 6 [Arabidopsis thaliana]
AT1G63970	50.44	45.42	29.53	29.52	AT1G63970	GO:0008299,isoprenoid biosynthetic process; GO:0008685,2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0015995,chlorophyll biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016117,carotenoid biosynthetic process; GO:0016829,lyase activity; GO:0019288,isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0046872,metal ion binding; 	ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]; K01770; 	NP_850971.1 isoprenoid F [Arabidopsis thaliana]
AT1G64030	6.88	7.56	0.87	1.12	AT1G64030	GO:0003674,molecular_function; GO:0004867,serine-type endopeptidase inhibitor activity; GO:0005615,extracellular space; GO:0005829,cytosol; GO:0006281,DNA repair; GO:0006974,cellular response to DNA damage stimulus; GO:0010466,negative regulation of peptidase activity; GO:0010951,negative regulation of endopeptidase activity; GO:0030414,peptidase inhibitor activity; 	SERPINB; serpin B; K13963; 	NP_176586.1 serpin 3 [Arabidopsis thaliana]
AT1G64090	159.64	139.17	98.84	83.47	AT1G64090	GO:0005515,protein binding; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0005789,endoplasmic reticulum membrane; GO:0009504,cell plate; GO:0009506,plasmodesma; GO:0009510,plasmodesmatal desmotubule; GO:0009617,response to bacterium; GO:0016020,membrane; GO:0071782,endoplasmic reticulum tubular network; GO:0071786,endoplasmic reticulum tubular network organization; GO:0098554,cytoplasmic side of endoplasmic reticulum membrane; 	--	NP_001185307.1 Reticulan like protein B3 [Arabidopsis thaliana]
AT1G64230	101.40	88.98	149.00	186.24	AT1G64230	GO:0000166,nucleotide binding; GO:0000209,protein polyubiquitination; GO:0004842,ubiquitin-protein transferase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0061631,ubiquitin conjugating enzyme activity; 	UBE2D, UBC4, UBC5; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]; K06689; 	NP_001031228.1 ubiquitin-conjugating enzyme 28 [Arabidopsis thaliana]
AT1G64340	3.55	1.63	0.00	0.00	AT1G64340	GO:0008150,biological_process; 	--	NP_001320923.1 Serine/Threonine-kinase [Arabidopsis thaliana]
AT1G64360	44.50	77.85	13.08	20.18	AT1G64360	GO:0006979,response to oxidative stress; GO:0010150,leaf senescence; 	--	NP_564832.1 hypothetical protein AT1G64360 [Arabidopsis thaliana]
AT1G64370	164.48	198.52	89.86	82.40	AT1G64370	GO:0008150,biological_process; 	--	NP_564833.1 filaggrin-like protein [Arabidopsis thaliana]
AT1G64400	8.56	9.02	16.72	19.98	AT1G64400	GO:0000166,nucleotide binding; GO:0001676,long-chain fatty acid metabolic process; GO:0004467,long-chain fatty acid-CoA ligase activity; GO:0005524,ATP binding; GO:0005783,endoplasmic reticulum; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0016020,membrane; GO:0016874,ligase activity; 	ACSL, fadD; long-chain acyl-CoA synthetase [EC:6.2.1.3]; K01897; 	NP_176622.1 AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana]
AT1G64450	10.70	9.51	29.19	30.35	AT1G64450	GO:0003674,molecular_function; GO:0016020,membrane; 	--	NP_176626.1 Glycine-rich protein family [Arabidopsis thaliana]
AT1G64490	7.50	6.87	15.30	30.08	AT1G64490	GO:0003713,transcription coactivator activity; GO:0005634,nucleus; GO:0005667,transcription regulator complex; GO:0060261,positive regulation of transcription initiation by RNA polymerase II; 	--	NP_564835.1 DEK, chromatin associated protein [Arabidopsis thaliana]
AT1G64510	130.27	149.47	97.45	66.69	AT1G64510	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0003746,translation elongation factor activity; GO:0005634,nucleus; GO:0005840,ribosome; GO:0006412,translation; GO:0006414,translational elongation; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0019843,rRNA binding; GO:0070181,small ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-S6, MRPS6, rpsF; small subunit ribosomal protein S6; K02990; 	NP_176632.1 Translation elongation factor EF1B/ribosomal protein S6 family protein [Arabidopsis thaliana]
AT1G64600	8.27	8.14	11.71	18.81	AT1G64600	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0006412,translation; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; 	--	NP_176641.2 copper ion binding / methyltransferase [Arabidopsis thaliana]
AT1G64940	1.37	2.35	0.00	0.00	AT1G64940	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_176674.1 cytochrome P450, family 87, subfamily A, polypeptide 6 [Arabidopsis thaliana]
AT1G65030	13.09	13.40	27.63	26.75	AT1G65030	GO:0005515,protein binding; GO:0005730,nucleolus; GO:0008150,biological_process; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_176683.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT1G65150	78.36	53.18	103.39	112.47	AT1G65150	GO:0004197,cysteine-type endopeptidase activity; GO:0004843,cysteine-type deubiquitinase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0016579,protein deubiquitination; GO:0031647,regulation of protein stability; 	--	NP_176694.1 TRAF-like family protein [Arabidopsis thaliana]
AT1G65270	82.09	92.87	63.73	45.40	AT1G65270	GO:0000325,plant-type vacuole; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0008150,biological_process; 	--	NP_564847.1 ER membrane protein complex subunit-like protein [Arabidopsis thaliana]
AT1G65480	14.55	14.44	8.18	1.31	AT1G65480	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0008429,phosphatidylethanolamine binding; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0009911,positive regulation of flower development; GO:0010022,meristem determinacy; GO:0010119,regulation of stomatal movement; GO:0030154,cell differentiation; GO:0048573,photoperiodism, flowering; 	FT; protein FLOWERING LOCUS T; K16223; 	NP_001320342.1 PEBP (phosphatidylethanolamine-binding protein) family protein [Arabidopsis thaliana]
AT1G65490	9.06	16.09	46.20	40.02	AT1G65490	GO:0005886,plasma membrane; GO:0009617,response to bacterium; GO:0009723,response to ethylene; GO:0009751,response to salicylic acid; GO:0009753,response to jasmonic acid; GO:0030275,LRR domain binding; GO:0033612,receptor serine/threonine kinase binding; GO:0048046,apoplast; GO:0071456,cellular response to hypoxia; 	--	NP_001320660.1 transmembrane protein [Arabidopsis thaliana]
AT1G65730	26.64	28.15	16.98	13.85	AT1G65730	GO:0016020,membrane; GO:0035672,oligopeptide transmembrane transport; GO:0035673,oligopeptide transmembrane transporter activity; 	--	NP_176750.1 YELLOW STRIPE like 7 [Arabidopsis thaliana]
AT1G65840	8.78	5.86	18.97	22.07	AT1G65840	GO:0005777,peroxisome; GO:0006598,polyamine catabolic process; GO:0016491,oxidoreductase activity; GO:0046203,spermidine catabolic process; GO:0046208,spermine catabolic process; GO:0046592,polyamine oxidase activity; GO:0052894,norspermine:oxygen oxidoreductase activity; GO:0052895,N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity; GO:0052901,spermine:oxygen oxidoreductase (spermidine-forming) activity; GO:0052902,spermidine:oxygen oxidoreductase (3-aminopropanal-forming) activity; 	PAO4, PAO3, PAO2; polyamine oxidase [EC:1.5.3.17 1.5.3.-]; K17839; 	NP_176759.1 polyamine oxidase 4 [Arabidopsis thaliana]
AT1G65930	159.80	169.16	107.56	110.48	AT1G65930	GO:0000287,magnesium ion binding; GO:0004450,isocitrate dehydrogenase (NADP+) activity; GO:0005507,copper ion binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006099,tricarboxylic acid cycle; GO:0006102,isocitrate metabolic process; GO:0006739,NADP metabolic process; GO:0006952,defense response; GO:0009506,plasmodesma; GO:0009570,chloroplast stroma; GO:0010043,response to zinc ion; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0019752,carboxylic acid metabolic process; GO:0042742,defense response to bacterium; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0051287,NAD binding; 	IDH1, IDH2, icd; isocitrate dehydrogenase [EC:1.1.1.42]; K00031; 	NP_176768.1 cytosolic NADP+-dependent isocitrate dehydrogenase [Arabidopsis thaliana]
AT1G66200	500.16	496.95	301.80	349.26	AT1G66200	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0004356,glutamate-ammonia ligase activity; GO:0005507,copper ion binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006542,glutamine biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016874,ligase activity; GO:0022626,cytosolic ribosome; GO:0042128,nitrate assimilation; GO:0043436,oxoacid metabolic process; GO:0048046,apoplast; GO:1901149,salicylic acid binding; 	glnA, GLUL; glutamine synthetase [EC:6.3.1.2]; K01915; 	NP_176794.1 hypothetical protein AT1G66200 [Arabidopsis thaliana]
AT1G66430	109.74	109.02	60.77	58.22	AT1G66430	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0006000,fructose metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008865,fructokinase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016051,carbohydrate biosynthetic process; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019252,starch biosynthetic process; GO:0046835,carbohydrate phosphorylation; 	E2.7.1.4, scrK; fructokinase [EC:2.7.1.4]; K00847; 	NP_564875.2 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]
AT1G66580	407.37	466.68	778.26	787.51	AT1G66580	GO:0000027,ribosomal large subunit assembly; GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005840,ribosome; GO:0006412,translation; GO:0010224,response to UV-B; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0032502,developmental process; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L10e, RPL10; large subunit ribosomal protein L10e; K02866; 	NP_564878.1 senescence associated gene 24 [Arabidopsis thaliana]
AT1G66600	0.00	0.00	1.86	2.39	AT1G66600	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009738,abscisic acid-activated signaling pathway; GO:0043565,sequence-specific DNA binding; 	--	NP_176833.1 ABA overly sensitive mutant 3 [Arabidopsis thaliana]
AT1G66850	784.00	870.85	490.34	460.49	AT1G66850	GO:0006869,lipid transport; 	--	NP_176857.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT1G67070	7.13	9.56	3.26	2.58	AT1G67070	GO:0004476,mannose-6-phosphate isomerase activity; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0008270,zinc ion binding; GO:0009298,GDP-mannose biosynthetic process; GO:0009646,response to absence of light; GO:0009744,response to sucrose; GO:0010043,response to zinc ion; GO:0016853,isomerase activity; GO:0019853,L-ascorbic acid biosynthetic process; GO:0033591,response to L-ascorbic acid; GO:0046680,response to DDT; GO:0046686,response to cadmium ion; GO:0046872,metal ion binding; 	manA, MPI; mannose-6-phosphate isomerase [EC:5.3.1.8]; K01809; 	NP_001319330.1 Mannose-6-phosphate isomerase, type I [Arabidopsis thaliana]
AT1G67120	4.96	5.21	8.83	8.62	AT1G67120	GO:0000027,ribosomal large subunit assembly; GO:0000055,ribosomal large subunit export from nucleus; GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0009506,plasmodesma; GO:0009553,embryo sac development; GO:0009738,abscisic acid-activated signaling pathway; GO:0009941,chloroplast envelope; GO:0016887,ATP hydrolysis activity; GO:0030687,preribosome, large subunit precursor; GO:0048638,regulation of developmental growth; 	MDN1, REA1; midasin; K14572; 	NP_176883.5 midasin-like protein [Arabidopsis thaliana]
AT1G67290	105.73	96.70	64.28	65.96	AT1G67290	GO:0004031,aldehyde oxidase activity; GO:0005576,extracellular region; GO:0008150,biological_process; GO:0016491,oxidoreductase activity; 	--	NP_176897.1 glyoxal oxidase-related protein [Arabidopsis thaliana]
AT1G67430	575.52	708.14	1118.43	1133.83	AT1G67430	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L17e, RPL17; large subunit ribosomal protein L17e; K02880; 	NP_176910.1 Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana]
AT1G67860	185.85	161.89	119.60	43.93	AT1G67860	--	--	NP_564910.1 transmembrane protein [Arabidopsis thaliana]
AT1G67865	241.48	196.52	90.28	112.26	AT1G67865	GO:0005575,cellular_component; GO:0050832,defense response to fungus; 	--	NP_001321801.1 hypothetical protein AT1G67865 [Arabidopsis thaliana]
AT1G67870	195.24	177.80	53.83	86.76	AT1G67870	GO:0008150,biological_process; 	--	KAG7658789.1 hypothetical protein ISN44_As01g057450 [Arabidopsis suecica]
AT1G67990	117.48	140.12	79.31	83.43	AT1G67990	GO:0008168,methyltransferase activity; GO:0008171,O-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009699,phenylpropanoid biosynthetic process; GO:0009809,lignin biosynthetic process; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042409,caffeoyl-CoA O-methyltransferase activity; GO:0046872,metal ion binding; GO:0048316,seed development; GO:0080012,trihydroxyferuloyl spermidine O-methyltransferase activity; GO:0080076,caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity; GO:0080077,trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity; GO:0080078,tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity; GO:0080088,spermidine hydroxycinnamate conjugate biosynthetic process; 	ATTSM1; putative caffeoyl-CoA 3-O-methyltransferase [EC:2.1.1.-]; K13067; 	NP_564917.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT1G68010	173.80	200.70	126.27	119.09	AT1G68010	GO:0003729,mRNA binding; GO:0005739,mitochondrion; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0008266,poly(U) RNA binding; GO:0008465,glycerate dehydrogenase activity; GO:0009507,chloroplast; GO:0009853,photorespiration; GO:0009854,oxidative photosynthetic carbon pathway; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0016618,hydroxypyruvate reductase activity; GO:0030267,glyoxylate reductase (NADP+) activity; GO:0042631,cellular response to water deprivation; GO:0048046,apoplast; GO:0051287,NAD binding; GO:0071482,cellular response to light stimulus; 	HPR1; glycerate dehydrogenase [EC:1.1.1.29]; K15893; 	NP_176968.1 hydroxypyruvate reductase [Arabidopsis thaliana]
AT1G68220	82.35	71.81	42.88	47.25	AT1G68220	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_564925.1 aerobic coproporphyrinogen-III oxidase (DUF1218) [Arabidopsis thaliana]
AT1G68550	3.84	3.96	21.80	14.68	AT1G68550	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009873,ethylene-activated signaling pathway; 	--	NP_177022.1 Integrase-type DNA-binding superfamily protein [Arabidopsis thaliana]
AT1G68600	16.11	22.02	8.57	12.10	AT1G68600	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006811,ion transport; GO:0009705,plant-type vacuole membrane; GO:0015743,malate transport; GO:0016020,membrane; GO:0098656,anion transmembrane transport; 	--	NP_564935.1 aluminum activated malate transporter family protein [Arabidopsis thaliana]
AT1G68740	17.47	16.85	14.20	5.06	AT1G68740	GO:0000822,inositol hexakisphosphate binding; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006817,phosphate ion transport; GO:0015114,phosphate ion transmembrane transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016036,cellular response to phosphate starvation; GO:0035435,phosphate ion transmembrane transport; 	--	NP_564940.1 EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]
AT1G68875	534.51	579.11	245.42	237.56	AT1G68875	GO:0008150,biological_process; 	--	NP_564949.1 hypothetical protein AT1G68875 [Arabidopsis thaliana]
AT1G69040	37.34	39.15	21.46	24.10	AT1G69040	GO:0005515,protein binding; GO:0005829,cytosol; GO:0006521,regulation of cellular amino acid metabolic process; GO:0009506,plasmodesma; GO:0009735,response to cytokinin; GO:0016597,amino acid binding; 	--	NP_974107.1 ACT domain repeat 4 [Arabidopsis thaliana]
AT1G69100	1.04	0.00	4.79	3.08	AT1G69100	GO:0003674,molecular_function; GO:0004190,aspartic-type endopeptidase activity; GO:0006508,proteolysis; GO:0008150,biological_process; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; 	CTSD; cathepsin D [EC:3.4.23.5]; K01379; 	NP_001320489.1 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT1G69500	33.02	29.27	14.35	13.22	AT1G69500	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0010584,pollen exine formation; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0018685,alkane 1-monooxygenase activity; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0080110,sporopollenin biosynthetic process; GO:0102033,long-chain fatty acid omega-hydroxylase activity; 	CYP704B1; long-chain fatty acid omega-monooxygenase [EC:1.14.14.80]; K20495; 	NP_177109.3 cytochrome P450, family 704, subfamily B, polypeptide 1 [Arabidopsis thaliana]
AT1G69588	11.87	6.87	31.50	19.67	AT1G69588	GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0009266,response to temperature stimulus; GO:0009734,auxin-activated signaling pathway; GO:0010078,maintenance of root meristem identity; GO:0010088,phloem development; GO:0010928,regulation of auxin mediated signaling pathway; GO:0030154,cell differentiation; GO:0033612,receptor serine/threonine kinase binding; GO:0045168,cell-cell signaling involved in cell fate commitment; GO:0045595,regulation of cell differentiation; GO:0048046,apoplast; GO:0080092,regulation of pollen tube growth; 	--	NP_001077799.1 CLAVATA3/ESR-RELATED 45 [Arabidopsis thaliana]
AT1G69600	3.54	4.24	6.94	19.64	AT1G69600	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009414,response to water deprivation; GO:0042803,protein homodimerization activity; GO:0045893,positive regulation of DNA-templated transcription; GO:0046872,metal ion binding; 	--	NP_177118.1 zinc finger homeodomain 1 [Arabidopsis thaliana]
AT1G69620	175.72	163.80	320.58	255.47	AT1G69620	GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-L34e, RPL34; large subunit ribosomal protein L34e; K02915; 	NP_177120.1 ribosomal protein L34 [Arabidopsis thaliana]
AT1G70600	279.45	321.74	491.25	501.69	AT1G70600	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L27Ae, RPL27A; large subunit ribosomal protein L27Ae; K02900; 	NP_177217.1 Ribosomal protein L18e/L15 superfamily protein [Arabidopsis thaliana]
AT1G70780	72.56	60.27	193.85	217.42	AT1G70780	GO:0003674,molecular_function; 	--	NP_565000.1 hypothetical protein AT1G70780 [Arabidopsis thaliana]
AT1G70820	81.47	46.86	36.26	46.38	AT1G70820	GO:0004615,phosphomannomutase activity; GO:0005975,carbohydrate metabolic process; GO:0006006,glucose metabolic process; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0016868,intramolecular transferase activity, phosphotransferases; 	--	NP_177239.1 phosphoglucomutase, putative / glucose phosphomutase [Arabidopsis thaliana]
AT1G70830	615.70	516.79	274.01	353.97	AT1G70830	GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006952,defense response; 	--	NP_001077807.1 MLP-like protein 28 [Arabidopsis thaliana]
AT1G71170	74.45	65.81	31.12	38.08	AT1G71170	GO:0005739,mitochondrion; GO:0006574,valine catabolic process; GO:0008442,3-hydroxyisobutyrate dehydrogenase activity; GO:0009083,branched-chain amino acid catabolic process; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0050661,NADP binding; GO:0051287,NAD binding; 	HIBADH, mmsB; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]; K00020; 	NP_565013.2 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana]
AT1G71697	28.58	30.18	13.94	18.75	AT1G71697	GO:0000166,nucleotide binding; GO:0004103,choline kinase activity; GO:0004305,ethanolamine kinase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0006629,lipid metabolic process; GO:0006646,phosphatidylethanolamine biosynthetic process; GO:0006656,phosphatidylcholine biosynthetic process; GO:0006657,CDP-choline pathway; GO:0008654,phospholipid biosynthetic process; GO:0009611,response to wounding; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; 	CHK; choline/ethanolamine kinase [EC:2.7.1.32 2.7.1.82]; K14156; 	NP_177315.1 choline kinase 1 [Arabidopsis thaliana]
AT1G71840	48.62	53.23	80.50	82.58	AT1G71840	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005829,cytosol; GO:0110165,cellular anatomical entity; 	--	NP_177329.2 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT1G71950	27.93	34.46	110.02	110.83	AT1G71950	GO:0004866,endopeptidase inhibitor activity; GO:0005739,mitochondrion; GO:0005886,plasma membrane; GO:0010951,negative regulation of endopeptidase activity; GO:0099503,secretory vesicle; 	--	NP_565029.1 Proteinase inhibitor, propeptide [Arabidopsis thaliana]
AT1G72170	78.10	82.50	46.96	42.12	AT1G72170	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0008150,biological_process; GO:0016020,membrane; GO:0061617,MICOS complex; 	--	NP_565036.1 MICOS complex subunit, putative (DUF543) [Arabidopsis thaliana]
AT1G72230	97.84	108.94	76.02	56.41	AT1G72230	GO:0005886,plasma membrane; GO:0009055,electron transfer activity; GO:0022900,electron transport chain; 	--	NP_177368.1 Cupredoxin superfamily protein [Arabidopsis thaliana]
AT1G72250	84.64	92.75	127.64	157.44	AT1G72250	GO:0000166,nucleotide binding; GO:0003774,cytoskeletal motor activity; GO:0003777,microtubule motor activity; GO:0005524,ATP binding; GO:0007018,microtubule-based movement; GO:0008017,microtubule binding; 	--	NP_001320541.1 Di-glucose binding protein with Kinesin motor domain-containing protein [Arabidopsis thaliana]
AT1G72280	31.40	23.92	10.29	15.69	AT1G72280	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0015035,protein-disulfide reductase activity; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016972,thiol oxidase activity; GO:0034975,protein folding in endoplasmic reticulum; GO:0071949,FAD binding; 	ERO1L; ERO1-like protein alpha [EC:1.8.4.-]; K10950; 	NP_177372.1 endoplasmic reticulum oxidoreductins 1 [Arabidopsis thaliana]
AT1G72320	15.43	14.80	24.17	23.78	AT1G72320	GO:0000056,ribosomal small subunit export from nucleus; GO:0000447,endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000472,endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000480,endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006417,regulation of translation; GO:0009744,response to sucrose; GO:0009749,response to glucose; GO:0010252,auxin homeostasis; GO:0030686,90S preribosome; GO:0030688,preribosome, small subunit precursor; 	--	NP_001321803.1 pumilio 23 [Arabidopsis thaliana]
AT1G72330	9.02	13.48	22.74	27.15	AT1G72330	GO:0001666,response to hypoxia; GO:0003824,catalytic activity; GO:0004021,L-alanine:2-oxoglutarate aminotransferase activity; GO:0005739,mitochondrion; GO:0008483,transaminase activity; GO:0009058,biosynthetic process; GO:0016740,transferase activity; GO:0030170,pyridoxal phosphate binding; GO:0042853,L-alanine catabolic process; 	GPT, ALT; alanine transaminase [EC:2.6.1.2]; K00814; 	NP_565040.2 alanine aminotransferase 2 [Arabidopsis thaliana]
AT1G72440	21.62	26.80	44.93	39.61	AT1G72440	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0010197,polar nucleus fusion; GO:0051302,regulation of cell division; 	--	NP_177388.2 CCAAT-binding factor [Arabidopsis thaliana]
AT1G72660	24.41	26.18	8.72	19.88	AT1G72660	GO:0000166,nucleotide binding; GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0016787,hydrolase activity; GO:0019003,GDP binding; 	K06944; uncharacterized protein; K06944; 	NP_001031270.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT1G72960	3.72	5.16	1.13	1.81	AT1G72960	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016020,membrane; GO:0016320,endoplasmic reticulum membrane fusion; GO:0016787,hydrolase activity; 	--	NP_177439.2 Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana]
AT1G73010	34.04	22.91	15.20	15.14	AT1G73010	GO:0004427,inorganic diphosphate phosphatase activity; GO:0016036,cellular response to phosphate starvation; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016791,phosphatase activity; GO:0046872,metal ion binding; GO:0051262,protein tetramerization; GO:0071456,cellular response to hypoxia; 	PHOSPHO2; pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]; K13248; 	VYS50862.1 unnamed protein product [Arabidopsis thaliana]
AT1G73060	40.68	38.49	14.73	25.78	AT1G73060	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; 	--	NP_565054.1 Low PSII Accumulation 3 [Arabidopsis thaliana]
AT1G73220	56.40	63.42	44.16	34.28	AT1G73220	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0010150,leaf senescence; GO:0015226,carnitine transmembrane transporter activity; GO:0015839,cadaverine transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; GO:1902603,carnitine transmembrane transport; 	--	NP_565059.2 organic cation/carnitine transporter1 [Arabidopsis thaliana]
AT1G73370	5.30	4.55	7.99	9.66	AT1G73370	GO:0005576,extracellular region; GO:0005985,sucrose metabolic process; GO:0016157,sucrose synthase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0080165,callose deposition in phloem sieve plate; 	E2.4.1.13; sucrose synthase [EC:2.4.1.13]; K00695; 	NP_001319374.1 sucrose synthase 6 [Arabidopsis thaliana]
AT1G73540	38.46	30.62	7.35	8.72	AT1G73540	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	E3.6.1.52; diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52]; K07766; 	NP_177495.2 nudix hydrolase homolog 21 [Arabidopsis thaliana]
AT1G73590	27.08	26.59	17.15	18.80	AT1G73590	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005886,plasma membrane; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009630,gravitropism; GO:0009640,photomorphogenesis; GO:0009734,auxin-activated signaling pathway; GO:0009793,embryo development ending in seed dormancy; GO:0009908,flower development; GO:0009925,basal plasma membrane; GO:0009926,auxin polar transport; GO:0010051,xylem and phloem pattern formation; GO:0010229,inflorescence development; GO:0010252,auxin homeostasis; GO:0010315,auxin export across the plasma membrane; GO:0010329,auxin efflux transmembrane transporter activity; GO:0010338,leaf formation; GO:0010358,leaf shaping; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0045177,apical part of cell; GO:0048364,root development; GO:0048367,shoot system development; GO:0048825,cotyledon development; GO:0048826,cotyledon morphogenesis; GO:0055085,transmembrane transport; GO:0060918,auxin transport; 	--	NP_177500.1 Auxin efflux carrier family protein [Arabidopsis thaliana]
AT1G73610	12.45	10.20	3.59	2.10	AT1G73610	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_177502.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT1G73655	89.73	111.77	51.22	61.53	AT1G73655	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0016853,isomerase activity; GO:0019048,modulation by virus of host process; 	--	NP_565069.4 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT1G73680	29.78	32.73	20.32	13.40	AT1G73680	GO:0001676,long-chain fatty acid metabolic process; GO:0004601,peroxidase activity; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0006979,response to oxidative stress; GO:0010150,leaf senescence; GO:0016491,oxidoreductase activity; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0020037,heme binding; GO:0031408,oxylipin biosynthetic process; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:0098869,cellular oxidant detoxification; 	DOX; alpha-dioxygenase [EC:1.14.99.-]; K10529; 	NP_177509.1 alpha dioxygenase [Arabidopsis thaliana]
AT1G73720	28.68	31.18	69.86	67.78	AT1G73720	GO:0000398,mRNA splicing, via spliceosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0016607,nuclear speck; GO:0071011,precatalytic spliceosome; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_177513.2 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT1G73880	24.38	22.64	11.87	11.29	AT1G73880	GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0033836,flavonol 7-O-beta-glucosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0047893,flavonol 3-O-glucosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0080046,quercetin 4'-O-glucosyltransferase activity; GO:0102360,daphnetin 3-O-glucosyltransferase activity; GO:0102425,myricetin 3-O-glucosyltransferase activity; 	--	NP_177529.2 UDP-glucosyl transferase 89B1 [Arabidopsis thaliana]
AT1G73940	35.97	54.78	85.84	75.16	AT1G73940	GO:0003729,mRNA binding; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_565076.1 tumor necrosis factor receptor family protein [Arabidopsis thaliana]
AT1G73970	25.91	11.80	8.53	11.48	AT1G73970	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_177537.2 obscurin-like protein [Arabidopsis thaliana]
AT1G74010	40.96	26.07	16.56	9.31	AT1G74010	GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005886,plasma membrane; GO:0009058,biosynthetic process; GO:0009505,plant-type cell wall; GO:0016844,strictosidine synthase activity; 	STR1; strictosidine synthase [EC:4.3.3.2]; K01757; 	NP_177541.1 Calcium-dependent phosphotriesterase superfamily protein [Arabidopsis thaliana]
AT1G74030	34.64	29.63	20.71	11.50	AT1G74030	GO:0000015,phosphopyruvate hydratase complex; GO:0000287,magnesium ion binding; GO:0004634,phosphopyruvate hydratase activity; GO:0006096,glycolytic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010090,trichome morphogenesis; GO:0016829,lyase activity; GO:0046872,metal ion binding; 	ENO, eno; enolase [EC:4.2.1.11]; K01689; 	NP_177543.1 enolase 1 [Arabidopsis thaliana]
AT1G74045	0.94	0.34	5.87	5.81	AT1G74045	GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009734,auxin-activated signaling pathway; GO:0016020,membrane; GO:0016021,integral component of membrane; 	--	NP_683494.2 tetraspanin-17 protein [Arabidopsis thaliana]
AT1G74110	8.56	3.35	1.46	2.42	AT1G74110	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008150,biological_process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_177551.1 cytochrome P450, family 78, subfamily A, polypeptide 10 [Arabidopsis thaliana]
AT1G74270	73.26	55.45	124.43	108.77	AT1G74270	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0042273,ribosomal large subunit biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-L35Ae, RPL35A; large subunit ribosomal protein L35Ae; K02917; 	NP_177567.1 Ribosomal protein L35Ae family protein [Arabidopsis thaliana]
AT1G74540	112.44	91.35	51.05	54.30	AT1G74540	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008216,spermidine metabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0072532,tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0072547,tricoumaroylspermidine meta-hydroxylase activity; GO:0072548,dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity; GO:0072549,monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity; GO:0072550,triferuloylspermidine meta-hydroxylase activity; GO:0072551,diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0072552,monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity; GO:0080088,spermidine hydroxycinnamate conjugate biosynthetic process; 	CYP98A8; cytochrome P450 family 98 subfamily A polypeptide 8 [EC:1.14.13.-]; K15506; 	NP_177594.1 cytochrome P450, family 98, subfamily A, polypeptide 8 [Arabidopsis thaliana]
AT1G74550	73.30	65.43	26.05	24.59	AT1G74550	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008216,spermidine metabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0072547,tricoumaroylspermidine meta-hydroxylase activity; GO:0072548,dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity; GO:0072549,monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity; 	CYP98A9; cytochrome P450 family 98 subfamily A polypeptide 9 [EC:1.14.13.-]; K23662; 	NP_177595.1 cytochrome P450, family 98, subfamily A, polypeptide 9 [Arabidopsis thaliana]
AT1G74560	96.51	61.64	118.91	124.93	AT1G74560	GO:0000724,double-strand break repair via homologous recombination; GO:0000785,chromatin; GO:0003682,chromatin binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006334,nucleosome assembly; GO:0016444,somatic cell DNA recombination; GO:0042393,histone binding; 	--	NP_177596.1 NAP1-related protein 1 [Arabidopsis thaliana]
AT1G74950	35.42	34.83	66.68	63.29	AT1G74950	GO:0005515,protein binding; GO:0005634,nucleus; GO:0006952,defense response; GO:0009611,response to wounding; GO:0009753,response to jasmonic acid; GO:0031347,regulation of defense response; GO:0042802,identical protein binding; GO:2000022,regulation of jasmonic acid mediated signaling pathway; 	JAZ; jasmonate ZIM domain-containing protein; K13464; 	NP_001322261.1 TIFY domain/Divergent CCT motif family protein [Arabidopsis thaliana]
AT1G74970	62.78	89.53	27.45	34.59	AT1G74970	GO:0000312,plastid small ribosomal subunit; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9; K02996; 	NP_177635.1 ribosomal protein S9 [Arabidopsis thaliana]
AT1G75030	81.26	79.58	31.88	31.03	AT1G75030	GO:0006952,defense response; 	--	NP_177640.1 thaumatin-like protein 3 [Arabidopsis thaliana]
AT1G75200	12.53	19.21	37.49	32.80	AT1G75200	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0005739,mitochondrion; GO:0008033,tRNA processing; GO:0010181,FMN binding; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016829,lyase activity; GO:0031591,wybutosine biosynthetic process; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0102521,tRNA-4-demethylwyosine synthase activity; 	--	NP_177656.2 flavodoxin family protein / radical SAM domain-containing protein [Arabidopsis thaliana]
AT1G75280	276.48	294.21	163.48	148.79	AT1G75280	GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006979,response to oxidative stress; GO:0016491,oxidoreductase activity; 	PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-]; K23050; 	NP_565107.1 NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]
AT1G75300	111.22	115.60	44.58	67.15	AT1G75300	GO:0005739,mitochondrion; GO:0016491,oxidoreductase activity; 	PCBER1; phenylcoumaran benzylic ether reductase [EC:1.3.1.-]; K23050; 	NP_177665.1 NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]
AT1G75350	206.82	255.73	122.57	120.67	AT1G75350	GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L31, rpmE; large subunit ribosomal protein L31; K02909; 	NP_565109.1 Ribosomal protein L31 [Arabidopsis thaliana]
AT1G75770	12.17	11.52	34.09	35.68	AT1G75770	--	--	NP_565117.1 hypothetical protein AT1G75770 [Arabidopsis thaliana]
AT1G75780	55.78	51.73	36.41	30.02	AT1G75780	GO:0000166,nucleotide binding; GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005200,structural constituent of cytoskeleton; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0009416,response to light stimulus; GO:0009826,unidimensional cell growth; GO:0046872,metal ion binding; 	TUBB; tubulin beta; K07375; 	NP_177706.1 tubulin beta-1 chain [Arabidopsis thaliana]
AT1G75790	20.60	25.31	12.98	15.89	AT1G75790	GO:0005507,copper ion binding; GO:0005886,plasma membrane; GO:0016491,oxidoreductase activity; 	--	NP_177707.1 SKU5 similar 18 [Arabidopsis thaliana]
AT1G75880	131.48	139.71	95.13	84.61	AT1G75880	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016020,membrane; GO:0016042,lipid catabolic process; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_974149.1 SGNH hydrolase-type esterase superfamily protein [Arabidopsis thaliana]
AT1G75910	316.70	356.57	179.19	162.26	AT1G75910	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0070505,pollen coat; 	--	NP_177719.1 extracellular lipase 4 [Arabidopsis thaliana]
AT1G75930	270.16	280.21	123.60	126.95	AT1G75930	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0070505,pollen coat; 	--	NP_177721.1 extracellular lipase 6 [Arabidopsis thaliana]
AT1G75940	558.04	547.36	313.73	343.17	AT1G75940	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0008422,beta-glucosidase activity; GO:0009651,response to salt stress; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0019762,glucosinolate catabolic process; GO:0102483,scopolin beta-glucosidase activity; 	E3.2.1.21; beta-glucosidase [EC:3.2.1.21]; K01188; 	AAF26759.2 T4O12.15 [Arabidopsis thaliana]
AT1G75945	23.93	37.38	567.86	545.76	AT1G75945	--	--	NP_001322302.1 hypothetical protein AT1G75945 [Arabidopsis thaliana]
AT1G75960	6.88	13.39	3.10	2.65	AT1G75960	GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0016874,ligase activity; 	--	NP_177724.1 AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana]
AT1G76100	67.96	68.92	40.02	42.41	AT1G76100	GO:0005507,copper ion binding; GO:0005739,mitochondrion; GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0022900,electron transport chain; GO:0031977,thylakoid lumen; GO:0046872,metal ion binding; 	petE; plastocyanin; K02638; 	NP_001321069.1 plastocyanin 1 [Arabidopsis thaliana]
AT1G76180	1665.22	1775.31	1155.06	1071.31	AT1G76180	GO:0001786,phosphatidylserine binding; GO:0003729,mRNA binding; GO:0005509,calcium ion binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0008289,lipid binding; GO:0009269,response to desiccation; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009507,chloroplast; GO:0009631,cold acclimation; GO:0009737,response to abscisic acid; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0031210,phosphatidylcholine binding; GO:0044183,protein folding chaperone; GO:0046872,metal ion binding; GO:0050821,protein stabilization; GO:0051179,localization; GO:0090559,regulation of membrane permeability; 	--	NP_001185408.1 Dehydrin family protein [Arabidopsis thaliana]
AT1G76200	195.24	237.89	388.87	291.27	AT1G76200	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0016020,membrane; GO:0070469,respirasome; 	--	NP_565128.1 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit [Arabidopsis thaliana]
AT1G76590	17.78	16.40	39.32	54.67	AT1G76590	--	--	NP_565135.1 PLATZ transcription factor family protein [Arabidopsis thaliana]
AT1G76810	16.22	22.34	5.99	7.48	AT1G76810	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006412,translation; GO:0006413,translational initiation; 	EIF5B; translation initiation factor 5B; K03243; 	NP_177807.3 eukaryotic translation initiation factor 2 (eIF-2) family protein [Arabidopsis thaliana]
AT1G77020	36.17	38.17	56.24	72.30	AT1G77020	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_177828.2 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]
AT1G77030	13.85	13.39	31.38	27.86	AT1G77030	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0003729,mRNA binding; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_177829.5 putative DEAD-box ATP-dependent RNA helicase 29 [Arabidopsis thaliana]
AT1G77280	5.28	5.35	1.34	2.30	AT1G77280	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016787,hydrolase activity; 	--	NP_001319394.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana]
AT1G77470	14.35	15.54	29.49	22.67	AT1G77470	GO:0000166,nucleotide binding; GO:0003677,DNA binding; GO:0003689,DNA clamp loader activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005663,DNA replication factor C complex; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006281,DNA repair; GO:0006952,defense response; GO:0016887,ATP hydrolysis activity; GO:0031348,negative regulation of defense response; 	RFC3_5; replication factor C subunit 3/5; K10756; 	NP_177871.1 replication factor C subunit 3 [Arabidopsis thaliana]
AT1G77550	15.60	19.65	27.07	29.90	AT1G77550	GO:0005737,cytoplasm; GO:0016874,ligase activity; GO:0036211,protein modification process; 	--	NP_177879.3 tubulin-tyrosine ligase [Arabidopsis thaliana]
AT1G77710	142.90	149.76	248.90	210.75	AT1G77710	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0071569,protein ufmylation; GO:1990592,protein K69-linked ufmylation; 	--	NP_177894.1 ubiquitin-fold modifier [Arabidopsis thaliana]
AT1G77940	654.49	644.90	1057.14	1150.44	AT1G77940	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L30e, RPL30; large subunit ribosomal protein L30e; K02908; 	NP_565164.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT1G78010	9.05	10.56	17.44	22.17	AT1G78010	GO:0000166,nucleotide binding; GO:0002098,tRNA wobble uridine modification; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006400,tRNA modification; GO:0008033,tRNA processing; GO:0016740,transferase activity; GO:0030488,tRNA methylation; 	--	NP_177924.3 tRNA modification GTPase [Arabidopsis thaliana]
AT1G78630	248.49	274.18	179.41	163.13	AT1G78630	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0017148,negative regulation of translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L13, MRPL13, rplM; large subunit ribosomal protein L13; K02871; 	NP_177984.1 Ribosomal protein L13 family protein [Arabidopsis thaliana]
AT1G78950	17.47	17.52	3.51	6.96	AT1G78950	GO:0005811,lipid droplet; GO:0016104,triterpenoid biosynthetic process; GO:0016853,isomerase activity; GO:0016866,intramolecular transferase activity; GO:0031559,oxidosqualene cyclase activity; GO:0042300,beta-amyrin synthase activity; 	LUP4; beta-amyrin synthase [EC:5.4.99.39]; K15813; 	NP_001323419.1 Terpenoid cyclases family protein [Arabidopsis thaliana]
AT1G79040	2923.36	2677.94	1505.35	1673.72	AT1G79040	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009654,photosystem II oxygen evolving complex; GO:0010270,photosystem II oxygen evolving complex assembly; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0042651,thylakoid membrane; 	psbR; photosystem II 10kDa protein; K03541; 	NP_178025.1 photosystem II subunit R [Arabidopsis thaliana]
AT1G79150	12.88	13.12	23.96	26.10	AT1G79150	GO:0003682,chromatin binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006260,DNA replication; GO:0006270,DNA replication initiation; GO:0042254,ribosome biogenesis; 	--	NP_178036.2 binding protein [Arabidopsis thaliana]
AT1G79160	17.57	16.45	26.71	36.15	AT1G79160	GO:0003674,molecular_function; GO:0005575,cellular_component; 	--	NP_178037.2 filamentous hemagglutinin transporter [Arabidopsis thaliana]
AT1G79470	12.40	12.43	20.31	22.09	AT1G79470	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0003938,IMP dehydrogenase activity; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0006164,purine nucleotide biosynthetic process; GO:0006177,GMP biosynthetic process; GO:0006183,GTP biosynthetic process; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; 	IMPDH, guaB; IMP dehydrogenase [EC:1.1.1.205]; K00088; 	NP_178065.1 Aldolase-type TIM barrel family protein [Arabidopsis thaliana]
AT1G79550	383.29	429.39	263.02	232.73	AT1G79550	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0002237,response to molecule of bacterial origin; GO:0004618,phosphoglycerate kinase activity; GO:0004672,protein kinase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006094,gluconeogenesis; GO:0006096,glycolytic process; GO:0009408,response to heat; GO:0009416,response to light stimulus; GO:0009506,plasmodesma; GO:0009570,chloroplast stroma; GO:0009749,response to glucose; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0043531,ADP binding; GO:0048046,apoplast; 	PGK, pgk; phosphoglycerate kinase [EC:2.7.2.3]; K00927; 	NP_178073.1 phosphoglycerate kinase [Arabidopsis thaliana]
AT1G79910	17.85	4.46	2.34	5.63	AT1G79910	GO:0003674,molecular_function; GO:0008104,protein localization; GO:0015031,protein transport; 	--	NP_001031304.1 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]
AT1G80320	8.52	3.74	0.35	2.25	AT1G80320	GO:0051213,dioxygenase activity; 	--	NP_178148.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]
AT1G80380	38.75	41.25	23.98	21.86	AT1G80380	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0008887,glycerate kinase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009853,photorespiration; GO:0009854,oxidative photosynthetic carbon pathway; GO:0009941,chloroplast envelope; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016787,hydrolase activity; 	GLYK; D-glycerate 3-kinase [EC:2.7.1.31]; K15918; 	NP_001185447.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT1G80460	74.81	86.33	55.49	43.96	AT1G80460	GO:0000166,nucleotide binding; GO:0002237,response to molecule of bacterial origin; GO:0004370,glycerol kinase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0006071,glycerol metabolic process; GO:0006072,glycerol-3-phosphate metabolic process; GO:0006641,triglyceride metabolic process; GO:0006952,defense response; GO:0009617,response to bacterium; GO:0010188,response to microbial phytotoxin; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019563,glycerol catabolic process; GO:0042742,defense response to bacterium; GO:0046167,glycerol-3-phosphate biosynthetic process; 	glpK, GK; glycerol kinase [EC:2.7.1.30]; K00864; 	NP_178161.1 Actin-like ATPase superfamily protein [Arabidopsis thaliana]
AT1G80620	12.98	13.65	18.43	28.22	AT1G80620	GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0043229,intracellular organelle; GO:1990904,ribonucleoprotein complex; 	--	NP_849914.1 S15/NS1, RNA-binding protein [Arabidopsis thaliana]
AT1G80680	16.11	15.58	25.14	23.76	AT1G80680	GO:0002758,innate immune response-activating signal transduction; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005643,nuclear pore; GO:0006913,nucleocytoplasmic transport; GO:0006952,defense response; GO:0009733,response to auxin; GO:0015031,protein transport; GO:0015288,porin activity; GO:0016020,membrane; GO:0017056,structural constituent of nuclear pore; GO:0031965,nuclear membrane; GO:0048574,long-day photoperiodism, flowering; GO:0051028,mRNA transport; GO:0055085,transmembrane transport; 	NUP98, ADAR2, NUP116; nuclear pore complex protein Nup98-Nup96; K14297; 	NP_178183.2 SUPPRESSOR OF AUXIN RESISTANCE 3 [Arabidopsis thaliana]
AT1G80750	34.01	34.96	73.02	55.39	AT1G80750	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L7e, RPL7; large subunit ribosomal protein L7e; K02937; 	NP_178190.1 Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]
AT1G80960	1.71	4.96	16.81	19.01	AT1G80960	GO:0005515,protein binding; GO:0008150,biological_process; 	--	NP_001319434.1 F-box and Leucine Rich Repeat domains containing protein [Arabidopsis thaliana]
AT2G01250	284.75	324.97	539.27	598.05	AT2G01250	GO:0000325,plant-type vacuole; GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005840,ribosome; GO:0009505,plant-type cell wall; GO:0009507,chloroplast; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L7e, RPL7; large subunit ribosomal protein L7e; K02937; 	NP_178234.1 Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]
AT2G01410	43.88	33.63	67.84	59.63	AT2G01410	GO:0000325,plant-type vacuole; GO:0005739,mitochondrion; GO:0005783,endoplasmic reticulum; GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_178250.1 NHL domain-containing protein [Arabidopsis thaliana]
AT2G01640	13.93	16.40	33.67	37.76	AT2G01640	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030686,90S preribosome; GO:0030688,preribosome, small subunit precursor; 	--	NP_001189496.1 ribosome biogenesis protein [Arabidopsis thaliana]
AT2G01990	27.09	14.71	5.51	3.54	AT2G01990	GO:0007140,male meiotic nuclear division; GO:0007143,female meiotic nuclear division; 	--	NP_001324929.1 XRI1-like protein [Arabidopsis thaliana]
AT2G02050	208.76	231.92	146.01	102.89	AT2G02050	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0005758,mitochondrial intermembrane space; GO:0009853,photorespiration; GO:0016020,membrane; GO:0031966,mitochondrial membrane; GO:0045271,respiratory chain complex I; GO:0070469,respirasome; 	NDUFB7; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7; K03963; 	NP_565280.1 NADH-ubiquinone oxidoreductase B18 subunit [Arabidopsis thaliana]
AT2G02400	17.63	33.90	14.46	13.15	AT2G02400	GO:0005886,plasma membrane; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; 	--	NP_178345.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT2G02500	17.01	13.88	5.20	5.25	AT2G02500	GO:0003824,catalytic activity; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0019288,isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0050518,2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; GO:0070567,cytidylyltransferase activity; 	ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]; K00991; 	NP_001325418.1 Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]
AT2G02690	1.99	0.96	8.07	5.76	AT2G02690	GO:0046872,metal ion binding; 	--	NP_001324084.1 Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]
AT2G02710	5.69	4.79	13.38	14.39	AT2G02710	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0009637,response to blue light; GO:0009881,photoreceptor activity; GO:0050896,response to stimulus; 	--	NP_565288.1 PAS/LOV protein B [Arabidopsis thaliana]
AT2G02810	12.20	12.37	6.42	3.04	AT2G02810	GO:0000139,Golgi membrane; GO:0005459,UDP-galactose transmembrane transporter activity; GO:0005460,UDP-glucose transmembrane transporter activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0008643,carbohydrate transport; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0015297,antiporter activity; GO:0015780,nucleotide-sugar transmembrane transport; GO:0015786,UDP-glucose transmembrane transport; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0055085,transmembrane transport; GO:0072334,UDP-galactose transmembrane transport; 	--	NP_565290.1 UDP-galactose transporter 1 [Arabidopsis thaliana]
AT2G02850	174.82	145.92	292.45	286.98	AT2G02850	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009055,electron transfer activity; GO:0009856,pollination; GO:0022900,electron transport chain; GO:0031012,extracellular matrix; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0048653,anther development; GO:0099503,secretory vesicle; 	--	NP_178388.1 plantacyanin [Arabidopsis thaliana]
AT2G02955	1.76	1.80	5.57	4.12	AT2G02955	GO:0001164,RNA polymerase I core promoter sequence-specific DNA binding; GO:0001188,RNA polymerase I preinitiation complex assembly; GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005668,RNA polymerase transcription factor SL1 complex; GO:0005730,nucleolus; GO:0006360,transcription by RNA polymerase I; GO:0009793,embryo development ending in seed dormancy; GO:0042790,nucleolar large rRNA transcription by RNA polymerase I; GO:0046872,metal ion binding; GO:0070860,RNA polymerase I core factor complex; 	--	NP_671769.1 maternal effect embryo arrest 12 [Arabidopsis thaliana]
AT2G03060	2.81	1.44	10.26	6.59	AT2G03060	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009555,pollen development; GO:0010152,pollen maturation; GO:0016020,membrane; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0046983,protein dimerization activity; GO:0080092,regulation of pollen tube growth; 	--	NP_001318186.1 AGAMOUS-like 30 [Arabidopsis thaliana]
AT2G03200	49.70	53.32	25.56	31.93	AT2G03200	GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; 	--	NP_565298.2 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT2G03470	24.42	19.60	39.41	33.99	AT2G03470	GO:0000118,histone deacetylase complex; GO:0003674,molecular_function; GO:0005634,nucleus; 	--	NP_178446.1 ELM2 domain-containing protein [Arabidopsis thaliana]
AT2G03480	106.43	133.68	205.70	273.21	AT2G03480	GO:0000138,Golgi trans cisterna; GO:0003674,molecular_function; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; 	QUA2, TSD2; putative pectin methyltransferase [EC:2.1.1.-]; K23870; 	NP_027543.2 QUASIMODO2 LIKE 2 [Arabidopsis thaliana]
AT2G03667	6.28	6.23	13.31	13.00	AT2G03667	GO:0004066,asparagine synthase (glutamine-hydrolyzing) activity; GO:0005575,cellular_component; GO:0006529,asparagine biosynthetic process; 	--	NP_001077875.2 Asparagine synthase family protein [Arabidopsis thaliana]
AT2G03690	42.32	36.68	60.45	75.81	AT2G03690	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0006744,ubiquinone biosynthetic process; GO:0016020,membrane; GO:0031314,extrinsic component of mitochondrial inner membrane; 	COQ4; ubiquinone biosynthesis protein COQ4; K18586; 	NP_178465.1 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein [Arabidopsis thaliana]
AT2G03720	4.02	1.11	0.00	0.00	AT2G03720	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0016787,hydrolase activity; GO:0048765,root hair cell differentiation; 	--	NP_001323815.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]
AT2G03740	115.91	153.60	55.65	66.21	AT2G03740	GO:0009507,chloroplast; GO:0009631,cold acclimation; GO:0019898,extrinsic component of membrane; 	--	CAA0356533.1 unnamed protein product [Arabidopsis thaliana]
AT2G03820	57.55	55.95	93.99	83.91	AT2G03820	GO:0000055,ribosomal large subunit export from nucleus; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006611,protein export from nucleus; GO:0007029,endoplasmic reticulum organization; GO:0009834,plant-type secondary cell wall biogenesis; GO:0015031,protein transport; GO:0043023,ribosomal large subunit binding; 	NMD3; nonsense-mediated mRNA decay protein 3; K07562; 	NP_178476.1 nonsense-mediated mRNA decay NMD3 family protein [Arabidopsis thaliana]
AT2G03850	183.85	196.71	106.04	91.88	AT2G03850	GO:0009507,chloroplast; 	--	NP_565306.1 Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]
AT2G03913	78.10	156.59	6.08	11.72	AT2G03913	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001030967.1 Cysteine-rich protein [Arabidopsis thaliana]
AT2G04030	179.69	181.78	395.35	360.12	AT2G04030	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005783,endoplasmic reticulum; GO:0006457,protein folding; GO:0009408,response to heat; GO:0009414,response to water deprivation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009651,response to salt stress; GO:0009704,de-etiolation; GO:0009941,chloroplast envelope; GO:0010157,response to chlorate; GO:0015031,protein transport; GO:0016887,ATP hydrolysis activity; GO:0042803,protein homodimerization activity; GO:0045037,protein import into chloroplast stroma; GO:0048471,perinuclear region of cytoplasm; GO:0051082,unfolded protein binding; GO:0140662,ATP-dependent protein folding chaperone; 	HSP90B, TRA1; heat shock protein 90kDa beta; K09487; 	NP_178487.1 Chaperone protein htpG family protein [Arabidopsis thaliana]
AT2G04050	2.46	1.62	4.95	7.28	AT2G04050	GO:0015297,antiporter activity; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0042910,xenobiotic transmembrane transporter activity; GO:0055085,transmembrane transport; GO:1990961,xenobiotic detoxification by transmembrane export across the plasma membrane; 	--	NP_178492.1 MATE efflux family protein [Arabidopsis thaliana]
AT2G04280	76.45	70.75	40.53	48.54	AT2G04280	GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0016020,membrane; 	--	NP_565310.1 calcium ion-binding protein [Arabidopsis thaliana]
AT2G04380	39.59	26.23	143.73	108.45	AT2G04380	GO:0008150,biological_process; 	--	NP_178519.1 hypothetical protein AT2G04380 [Arabidopsis thaliana]
AT2G04390	161.14	163.81	398.44	429.74	AT2G04390	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S17e, RPS17; small subunit ribosomal protein S17e; K02962; 	NP_178520.1 Ribosomal S17 family protein [Arabidopsis thaliana]
AT2G04690	210.47	204.43	40.42	77.34	AT2G04690	GO:0000325,plant-type vacuole; GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0016020,membrane; GO:0099503,secretory vesicle; 	--	NP_001077878.1 Pyridoxamine 5'-phosphate oxidase family protein [Arabidopsis thaliana]
AT2G04740	31.87	39.18	14.99	13.49	AT2G04740	GO:0000151,ubiquitin ligase complex; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0016567,protein ubiquitination; GO:0042742,defense response to bacterium; 	--	NP_001323658.1 ankyrin repeat family protein [Arabidopsis thaliana]
AT2G05070	303.58	295.26	191.56	189.73	AT2G05070	GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0005739,mitochondrion; GO:0009269,response to desiccation; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009517,PSII associated light-harvesting complex II; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0009645,response to low light intensity stimulus; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009769,photosynthesis, light harvesting in photosystem II; GO:0009941,chloroplast envelope; GO:0010114,response to red light; GO:0010218,response to far red light; GO:0010287,plastoglobule; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0030104,water homeostasis; GO:0046872,metal ion binding; GO:0071215,cellular response to abscisic acid stimulus; GO:0090333,regulation of stomatal closure; GO:1903428,positive regulation of reactive oxygen species biosynthetic process; 	LHCB2; light-harvesting complex II chlorophyll a/b binding protein 2; K08913; 	NP_178582.1 photosystem II light harvesting complex protein 2.2 [Arabidopsis thaliana]
AT2G05100	209.28	187.79	95.54	93.88	AT2G05100	GO:0005739,mitochondrion; GO:0009269,response to desiccation; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009517,PSII associated light-harvesting complex II; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0009645,response to low light intensity stimulus; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009769,photosynthesis, light harvesting in photosystem II; GO:0009941,chloroplast envelope; GO:0010114,response to red light; GO:0010218,response to far red light; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; GO:0030104,water homeostasis; GO:0046872,metal ion binding; GO:0071215,cellular response to abscisic acid stimulus; GO:0090333,regulation of stomatal closure; GO:1903428,positive regulation of reactive oxygen species biosynthetic process; 	LHCB2; light-harvesting complex II chlorophyll a/b binding protein 2; K08913; 	NP_178585.1 photosystem II light harvesting complex protein 2.1 [Arabidopsis thaliana]
AT2G05540	5.17	5.68	25.64	17.01	AT2G05540	--	--	NP_178622.1 Glycine-rich protein family [Arabidopsis thaliana]
AT2G05760	8.54	5.93	2.37	2.22	AT2G05760	GO:0009506,plasmodesma; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; 	--	NP_178636.1 Xanthine/uracil permease family protein [Arabidopsis thaliana]
AT2G05990	432.03	347.73	198.21	250.01	AT2G05990	GO:0004318,enoyl-[acyl-carrier-protein] reductase (NADH) activity; GO:0005507,copper ion binding; GO:0005739,mitochondrion; GO:0005835,fatty acid synthase complex; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0016491,oxidoreductase activity; GO:0016631,enoyl-[acyl-carrier-protein] reductase activity; 	fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]; K00208; 	NP_565331.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT2G06925	77.27	89.85	35.18	65.53	AT2G06925	GO:0004623,phospholipase A2 activity; GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0005543,phospholipid binding; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005773,vacuole; GO:0005794,Golgi apparatus; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0031410,cytoplasmic vesicle; GO:0046872,metal ion binding; GO:0047498,calcium-dependent phospholipase A2 activity; GO:0050482,arachidonic acid secretion; 	PLA2G, SPLA2; secretory phospholipase A2 [EC:3.1.1.4]; K01047; 	NP_565337.1 Phospholipase A2 family protein [Arabidopsis thaliana]
AT2G06990	18.11	18.96	28.12	34.26	AT2G06990	GO:0000166,nucleotide binding; GO:0000460,maturation of 5.8S rRNA; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0006397,mRNA processing; GO:0006401,RNA catabolic process; GO:0009908,flower development; GO:0010093,specification of floral organ identity; GO:0016070,RNA metabolic process; GO:0016607,nuclear speck; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0060149,negative regulation of post-transcriptional gene silencing; 	MTR4, SKIV2L2; ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]; K12598; 	NP_565338.1 RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana]
AT2G07560	59.02	66.32	44.05	39.88	AT2G07560	GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0008553,P-type proton-exporting transporter activity; GO:0015662,P-type ion transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0034220,ion transmembrane transport; GO:0046872,metal ion binding; GO:0051453,regulation of intracellular pH; GO:0120029,proton export across plasma membrane; GO:1902600,proton transmembrane transport; 	PMA1, PMA2; H+-transporting ATPase [EC:7.1.2.1]; K01535; 	NP_178762.1 H[+]-ATPase 6 [Arabidopsis thaliana]
AT2G11626	6.11	0.71	15.74	31.54	AT2G11626	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_671832.1 hypothetical protein AT2G11626 [Arabidopsis thaliana]
AT2G12880	10.41	3.58	23.43	37.36	AT2G12880	GO:0003676,nucleic acid binding; GO:0008150,biological_process; GO:0008270,zinc ion binding; 	--	NP_178944.1 Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
AT2G14290	93.76	114.69	229.41	183.00	AT2G14290	GO:0005515,protein binding; 	--	NP_179039.1 LL-diaminopimelate protein (DUF295) [Arabidopsis thaliana]
AT2G15620	30.47	28.81	18.78	20.69	AT2G15620	GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010167,response to nitrate; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0042128,nitrate assimilation; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0048307,ferredoxin-nitrite reductase activity; GO:0050421,nitrite reductase (NO-forming) activity; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; 	nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]; K00366; 	NP_179164.1 nitrite reductase 1 [Arabidopsis thaliana]
AT2G16030	1.01	1.48	5.33	9.35	AT2G16030	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_179201.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT2G16070	31.34	13.72	39.49	53.04	AT2G16070	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009527,plastid outer membrane; GO:0009536,plastid; GO:0009707,chloroplast outer membrane; GO:0009739,response to gibberellin; GO:0010020,chloroplast fission; GO:0016020,membrane; GO:0070273,phosphatidylinositol-4-phosphate binding; 	--	NP_028242.1 plastid division2 [Arabidopsis thaliana]
AT2G16130	7.02	2.85	0.88	1.41	AT2G16130	GO:0005351,carbohydrate:proton symporter activity; GO:0005886,plasma membrane; GO:0008643,carbohydrate transport; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015293,symporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0055085,transmembrane transport; GO:1902600,proton transmembrane transport; 	--	NP_179210.1 polyol/monosaccharide transporter 2 [Arabidopsis thaliana]
AT2G16500	32.77	40.54	20.32	23.04	AT2G16500	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006527,arginine catabolic process; GO:0006596,polyamine biosynthetic process; GO:0006979,response to oxidative stress; GO:0008295,spermidine biosynthetic process; GO:0008792,arginine decarboxylase activity; GO:0009409,response to cold; GO:0009446,putrescine biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009651,response to salt stress; GO:0016829,lyase activity; GO:0016831,carboxy-lyase activity; GO:0033388,putrescine biosynthetic process from arginine; GO:0042803,protein homodimerization activity; 	E4.1.1.19; arginine decarboxylase [EC:4.1.1.19]; K01583; 	NP_179243.1 arginine decarboxylase 1 [Arabidopsis thaliana]
AT2G16570	4.96	5.90	15.28	9.95	AT2G16570	GO:0004044,amidophosphoribosyltransferase activity; GO:0005737,cytoplasm; GO:0006164,purine nucleotide biosynthetic process; GO:0006189,'de novo' IMP biosynthetic process; GO:0006541,glutamine metabolic process; GO:0009113,purine nucleobase biosynthetic process; GO:0009505,plant-type cell wall; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; 	purF, PPAT; amidophosphoribosyltransferase [EC:2.4.2.14]; K00764; 	NP_179247.1 GLN phosphoribosyl pyrophosphate amidotransferase 1 [Arabidopsis thaliana]
AT2G16580	1.43	0.00	14.45	2.65	AT2G16580	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0009733,response to auxin; GO:0009737,response to abscisic acid; GO:0016020,membrane; 	SAUR; SAUR family protein; K14488; 	NP_179248.1 SAUR-like auxin-responsive protein family [Arabidopsis thaliana]
AT2G16660	80.33	73.42	146.67	138.98	AT2G16660	GO:0016020,membrane; 	--	NP_179257.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT2G16760	15.71	21.20	8.92	8.82	AT2G16760	GO:0005783,endoplasmic reticulum; 	--	NP_565392.1 Calcium-dependent phosphotriesterase superfamily protein [Arabidopsis thaliana]
AT2G16910	66.63	69.33	32.45	34.63	AT2G16910	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677,DNA binding; GO:0003682,chromatin binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009555,pollen development; GO:0043565,sequence-specific DNA binding; GO:0046983,protein dimerization activity; GO:0048658,anther wall tapetum development; 	--	NP_179283.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Arabidopsis thaliana]
AT2G16990	5.70	6.09	1.11	2.57	AT2G16990	GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_001323581.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT2G17000	3.67	4.84	1.98	1.02	AT2G17000	GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006820,anion transport; GO:0008381,mechanosensitive ion channel activity; GO:0016020,membrane; GO:0034220,ion transmembrane transport; GO:0055085,transmembrane transport; 	--	NP_179292.1 Mechanosensitive ion channel family protein [Arabidopsis thaliana]
AT2G17250	10.54	8.32	16.35	19.01	AT2G17250	GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009793,embryo development ending in seed dormancy; GO:0016020,membrane; GO:0030692,Noc4p-Nop14p complex; GO:0031965,nuclear membrane; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	--	NP_179316.2 CCAAT-binding factor [Arabidopsis thaliana]
AT2G17630	43.39	52.15	33.51	24.96	AT2G17630	GO:0003824,catalytic activity; GO:0004648,O-phospho-L-serine:2-oxoglutarate aminotransferase activity; GO:0005737,cytoplasm; GO:0006564,L-serine biosynthetic process; GO:0008483,transaminase activity; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016740,transferase activity; GO:0030170,pyridoxal phosphate binding; 	serC, PSAT1; phosphoserine aminotransferase [EC:2.6.1.52]; K00831; 	NP_179354.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [Arabidopsis thaliana]
AT2G17760	34.79	32.40	21.66	19.13	AT2G17760	GO:0003674,molecular_function; GO:0004190,aspartic-type endopeptidase activity; GO:0005886,plasma membrane; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016020,membrane; GO:0016787,hydrolase activity; 	--	NP_849967.1 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT2G17880	226.53	219.65	147.42	141.01	AT2G17880	GO:0009507,chloroplast; 	--	NP_179378.1 Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]
AT2G18130	5.65	6.99	2.04	1.31	AT2G18130	GO:0003993,acid phosphatase activity; GO:0005576,extracellular region; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	ACP7; acid phosphatase type 7; K22390; 	NP_179405.1 purple acid phosphatase 11 [Arabidopsis thaliana]
AT2G18160	12.26	11.98	20.27	44.56	AT2G18160	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0045893,positive regulation of DNA-templated transcription; GO:0046982,protein heterodimerization activity; 	--	NP_179408.1 basic leucine-zipper 2 [Arabidopsis thaliana]
AT2G18193	3.46	2.42	24.04	41.40	AT2G18193	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005783,endoplasmic reticulum; GO:0006950,response to stress; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_849972.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT2G18220	12.25	11.44	24.11	26.46	AT2G18220	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0030690,Noc1p-Noc2p complex; GO:0030691,Noc2p-Noc3p complex; GO:0042273,ribosomal large subunit biogenesis; GO:0042802,identical protein binding; GO:0042803,protein homodimerization activity; 	--	NP_179414.2 Noc2p family [Arabidopsis thaliana]
AT2G18230	192.57	150.51	115.56	116.87	AT2G18230	GO:0000287,magnesium ion binding; GO:0004427,inorganic diphosphate phosphatase activity; GO:0005654,nucleoplasm; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006796,phosphate-containing compound metabolic process; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; GO:0052386,cell wall thickening; GO:0052546,cell wall pectin metabolic process; 	ppa; inorganic pyrophosphatase [EC:3.6.1.1]; K01507; 	NP_179415.1 pyrophosphorylase 2 [Arabidopsis thaliana]
AT2G18330	11.28	9.84	15.36	23.15	AT2G18330	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0007005,mitochondrion organization; GO:0016887,ATP hydrolysis activity; 	--	NP_565435.1 AAA-type ATPase family protein [Arabidopsis thaliana]
AT2G18380	14.95	14.79	35.52	26.29	AT2G18380	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0009908,flower development; GO:0043565,sequence-specific DNA binding; GO:0046872,metal ion binding; 	--	NP_179429.2 GATA transcription factor 20 [Arabidopsis thaliana]
AT2G18480	7.36	5.56	1.99	2.56	AT2G18480	GO:0005351,carbohydrate:proton symporter activity; GO:0008643,carbohydrate transport; GO:0010311,lateral root formation; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015293,symporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0055085,transmembrane transport; GO:1902600,proton transmembrane transport; 	--	NP_179438.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT2G18500	1.73	2.72	0.00	0.00	AT2G18500	GO:0005634,nucleus; GO:0045892,negative regulation of DNA-templated transcription; 	--	NP_179440.1 ovate family protein 7 [Arabidopsis thaliana]
AT2G18900	20.08	22.71	34.93	37.00	AT2G18900	GO:0005515,protein binding; 	NAN1, UTP17, WDR75; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17); K14552; 	NP_179480.2 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT2G19070	100.90	105.21	54.25	77.42	AT2G19070	GO:0009555,pollen development; GO:0010584,pollen exine formation; GO:0016410,N-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0080072,spermidine:sinapoyl CoA N-acyltransferase activity; GO:0080073,spermidine:coumaroyl CoA N-acyltransferase activity; GO:0080074,spermidine:caffeoyl CoA N-acyltransferase activity; GO:0080075,spermidine:feruloyl CoA N-acyltransferase activity; GO:0080088,spermidine hydroxycinnamate conjugate biosynthetic process; 	E2.3.1.133, HCT; shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]; K13065; 	NP_179497.1 spermidine hydroxycinnamoyl transferase [Arabidopsis thaliana]
AT2G19500	19.60	19.15	9.63	12.96	AT2G19500	GO:0003824,catalytic activity; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0008131,primary amine oxidase activity; GO:0009690,cytokinin metabolic process; GO:0009823,cytokinin catabolic process; GO:0016491,oxidoreductase activity; GO:0019139,cytokinin dehydrogenase activity; GO:0050660,flavin adenine dinucleotide binding; GO:0071949,FAD binding; 	CKX; cytokinin dehydrogenase [EC:1.5.99.12]; K00279; 	NP_565455.1 cytokinin oxidase 2 [Arabidopsis thaliana]
AT2G19540	53.01	50.22	84.00	90.45	AT2G19540	GO:0005515,protein binding; GO:0005730,nucleolus; GO:0009408,response to heat; GO:0016567,protein ubiquitination; GO:0042254,ribosome biogenesis; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:1900035,negative regulation of cellular response to heat; 	--	NP_179544.1 Transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT2G19670	26.39	32.98	46.28	48.86	AT2G19670	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006325,chromatin organization; GO:0008168,methyltransferase activity; GO:0016274,protein-arginine N-methyltransferase activity; GO:0016740,transferase activity; GO:0018216,peptidyl-arginine methylation; GO:0032259,methylation; 	PRMT1; type I protein arginine methyltransferase [EC:2.1.1.319]; K11434; 	NP_179557.1 protein arginine methyltransferase 1A [Arabidopsis thaliana]
AT2G19730	835.74	838.68	1402.13	1441.02	AT2G19730	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009955,adaxial/abaxial pattern specification; GO:0009965,leaf morphogenesis; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L28e, RPL28; large subunit ribosomal protein L28e; K02903; 	NP_001031374.1 Ribosomal L28e protein family [Arabidopsis thaliana]
AT2G19770	115.70	101.73	48.33	87.83	AT2G19770	GO:0003779,actin binding; GO:0003785,actin monomer binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005856,cytoskeleton; GO:0005938,cell cortex; GO:0009524,phragmoplast; GO:0030036,actin cytoskeleton organization; GO:0042989,sequestering of actin monomers; 	PFN; profilin; K05759; 	NP_179567.1 profilin 5 [Arabidopsis thaliana]
AT2G19800	22.84	24.56	47.40	31.38	AT2G19800	GO:0005506,iron ion binding; GO:0005737,cytoplasm; GO:0016491,oxidoreductase activity; GO:0019310,inositol catabolic process; GO:0019853,L-ascorbic acid biosynthetic process; GO:0046872,metal ion binding; GO:0050113,inositol oxygenase activity; 	MIOX; inositol oxygenase [EC:1.13.99.1]; K00469; 	NP_565459.1 myo-inositol oxygenase 2 [Arabidopsis thaliana]
AT2G19930	1.35	1.74	0.34	0.29	AT2G19930	GO:0001172,RNA-templated transcription; GO:0003723,RNA binding; GO:0003968,RNA-directed 5'-3' RNA polymerase activity; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0030422,siRNA processing; GO:0031047,gene silencing by RNA; GO:0031380,nuclear RNA-directed RNA polymerase complex; 	--	NP_001325339.1 RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
AT2G20260	269.06	255.74	158.71	150.55	AT2G20260	GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009538,photosystem I reaction center; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019904,protein domain specific binding; 	psaE; photosystem I subunit IV; K02693; 	NP_179616.1 photosystem I subunit E-2 [Arabidopsis thaliana]
AT2G20390	18.81	17.95	35.79	33.52	AT2G20390	GO:0008150,biological_process; 	--	NP_565470.1 cytochrome oxidase complex assembly protein [Arabidopsis thaliana]
AT2G20530	158.37	172.57	276.70	284.17	AT2G20530	GO:0000325,plant-type vacuole; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0007005,mitochondrion organization; GO:0016020,membrane; 	--	NP_001077924.1 prohibitin 6 [Arabidopsis thaliana]
AT2G20585	30.84	31.02	70.89	60.76	AT2G20585	GO:0000741,karyogamy; GO:0005739,mitochondrion; GO:0010197,polar nucleus fusion; 	--	NP_001118352.1 nuclear fusion defective 6 [Arabidopsis thaliana]
AT2G20690	80.39	81.10	37.22	51.57	AT2G20690	GO:0004746,riboflavin synthase activity; GO:0009231,riboflavin biosynthetic process; GO:0009507,chloroplast; 	ribE, RIB5; riboflavin synthase [EC:2.5.1.9]; K00793; 	NP_565482.1 lumazine-binding family protein [Arabidopsis thaliana]
AT2G21130	166.01	177.07	121.48	90.89	AT2G21130	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0016018,cyclosporin A binding; GO:0016853,isomerase activity; 	E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]; K01802; 	NP_179709.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT2G21180	56.80	45.52	22.16	28.48	AT2G21180	GO:0016020,membrane; 	--	NP_565499.1 transmembrane protein [Arabidopsis thaliana]
AT2G21330	306.79	300.32	163.86	161.39	AT2G21330	GO:0004332,fructose-bisphosphate aldolase activity; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006094,gluconeogenesis; GO:0006096,glycolytic process; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0016829,lyase activity; GO:0022626,cytosolic ribosome; GO:0030388,fructose 1,6-bisphosphate metabolic process; GO:0031977,thylakoid lumen; GO:0048046,apoplast; 	ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; K01623; 	NP_565508.1 fructose-bisphosphate aldolase 1 [Arabidopsis thaliana]
AT2G21430	37.11	29.88	13.98	22.77	AT2G21430	GO:0000323,lytic vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0005615,extracellular space; GO:0005764,lysosome; GO:0005773,vacuole; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0051603,proteolysis involved in protein catabolic process; 	CTSF; cathepsin F [EC:3.4.22.41]; K01373; 	NP_565512.1 Papain family cysteine protease [Arabidopsis thaliana]
AT2G21490	64.24	59.07	30.84	25.66	AT2G21490	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009631,cold acclimation; GO:0009737,response to abscisic acid; GO:0046872,metal ion binding; 	--	NP_179744.1 dehydrin LEA [Arabidopsis thaliana]
AT2G21750	4.96	4.09	0.00	0.00	AT2G21750	GO:0005576,extracellular region; GO:0009567,double fertilization forming a zygote and endosperm; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0080155,regulation of double fertilization forming a zygote and endosperm; GO:0110165,cellular anatomical entity; GO:2000008,regulation of protein localization to cell surface; 	--	NP_179767.1 Egg cell-secreted protein (DUF1278) [Arabidopsis thaliana]
AT2G21970	79.25	72.30	51.53	45.59	AT2G21970	GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009611,response to wounding; GO:0009765,photosynthesis, light harvesting; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0071486,cellular response to high light intensity; GO:0071492,cellular response to UV-A; 	--	NP_565524.1 stress enhanced protein 2 [Arabidopsis thaliana]
AT2G22410	0.23	0.25	0.99	2.54	AT2G22410	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:1900865,chloroplast RNA modification; 	--	NP_179827.1 SLOW GROWTH 1 [Arabidopsis thaliana]
AT2G22780	53.02	59.48	34.54	39.10	AT2G22780	GO:0003824,catalytic activity; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0006097,glyoxylate cycle; GO:0006099,tricarboxylic acid cycle; GO:0006108,malate metabolic process; GO:0009507,chloroplast; GO:0016491,oxidoreductase activity; GO:0016615,malate dehydrogenase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0019752,carboxylic acid metabolic process; GO:0030060,L-malate dehydrogenase activity; GO:0031998,regulation of fatty acid beta-oxidation; GO:0080093,regulation of photorespiration; 	MDH2; malate dehydrogenase [EC:1.1.1.37]; K00026; 	NP_179863.1 peroxisomal NAD-malate dehydrogenase 1 [Arabidopsis thaliana]
AT2G22800	9.09	12.49	2.45	2.63	AT2G22800	GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0043565,sequence-specific DNA binding; 	--	NP_179865.1 Homeobox-leucine zipper protein family [Arabidopsis thaliana]
AT2G22840	6.03	4.85	2.12	1.63	AT2G22840	GO:0000976,transcription cis-regulatory region binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009409,response to cold; GO:0009624,response to nematode; GO:0009739,response to gibberellin; GO:0019760,glucosinolate metabolic process; GO:0032502,developmental process; GO:0048364,root development; GO:0061062,regulation of nematode larval development; GO:0099402,plant organ development; 	--	NP_179869.1 growth-regulating factor 1 [Arabidopsis thaliana]
AT2G22970	139.62	122.51	229.44	279.58	AT2G22970	GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0016787,hydrolase activity; GO:0019748,secondary metabolic process; 	--	NP_179880.1 serine carboxypeptidase-like 11 [Arabidopsis thaliana]
AT2G23010	2.13	4.10	8.71	15.14	AT2G23010	GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0019748,secondary metabolic process; GO:0047158,sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity; 	--	NP_179884.1 serine carboxypeptidase-like 9 [Arabidopsis thaliana]
AT2G23090	148.28	226.00	334.60	309.34	AT2G23090	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_565547.1 Uncharacterized protein family SERF [Arabidopsis thaliana]
AT2G23120	260.32	279.99	187.47	173.87	AT2G23120	GO:0005773,vacuole; GO:0005829,cytosol; 	--	NP_565548.1 Late embryogenesis abundant protein, group 6 [Arabidopsis thaliana]
AT2G23390	8.36	9.91	18.18	16.39	AT2G23390	--	K09919; uncharacterized protein; K09919; 	NP_001323779.1 acyl-CoA [Arabidopsis thaliana]
AT2G23510	3.11	4.56	0.75	0.64	AT2G23510	GO:0006596,polyamine biosynthetic process; GO:0008216,spermidine metabolic process; GO:0016410,N-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0080072,spermidine:sinapoyl CoA N-acyltransferase activity; GO:0080089,sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity; 	SDT; spermidine disinapoyl transferase [EC:2.3.1.248]; K20239; 	NP_179932.1 spermidine disinapoyl acyltransferase [Arabidopsis thaliana]
AT2G23670	121.79	129.26	68.96	59.39	AT2G23670	GO:0003674,molecular_function; GO:0005773,vacuole; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; 	--	NP_565556.1 homolog of Synechocystis YCF37 [Arabidopsis thaliana]
AT2G23680	105.22	32.08	1.18	2.28	AT2G23680	GO:0005886,plasma membrane; GO:0016020,membrane; GO:0016021,integral component of membrane; 	--	NP_001118373.1 Cold acclimation protein WCOR413 family [Arabidopsis thaliana]
AT2G23800	217.30	203.32	85.63	99.34	AT2G23800	GO:0004161,dimethylallyltranstransferase activity; GO:0004311,farnesyltranstransferase activity; GO:0004337,geranyltranstransferase activity; GO:0004659,prenyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0008299,isoprenoid biosynthetic process; GO:0016020,membrane; GO:0016117,carotenoid biosynthetic process; GO:0016740,transferase activity; GO:0033384,geranyl diphosphate biosynthetic process; GO:0033386,geranylgeranyl diphosphate biosynthetic process; GO:0045337,farnesyl diphosphate biosynthetic process; GO:0046872,metal ion binding; 	GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]; K13789; 	NP_179960.1 geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
AT2G23810	53.58	70.17	37.36	33.78	AT2G23810	GO:0005773,vacuole; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009734,auxin-activated signaling pathway; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0050829,defense response to Gram-negative bacterium; 	--	NP_850045.2 tetraspanin8 [Arabidopsis thaliana]
AT2G23930	155.23	155.77	240.24	258.86	AT2G23930	GO:0000387,spliceosomal snRNP assembly; GO:0000398,mRNA splicing, via spliceosome; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005682,U5 snRNP; GO:0005685,U1 snRNP; GO:0005686,U2 snRNP; GO:0005687,U4 snRNP; GO:0005689,U12-type spliceosomal complex; GO:0005773,vacuole; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0034719,SMN-Sm protein complex; GO:0043186,P granule; GO:0043229,intracellular organelle; GO:0071004,U2-type prespliceosome; GO:0071011,precatalytic spliceosome; GO:0071013,catalytic step 2 spliceosome; GO:0097526,spliceosomal tri-snRNP complex; GO:1990904,ribonucleoprotein complex; 	SNRPG, SMG; small nuclear ribonucleoprotein G; K11099; 	NP_179971.1 Putative small nuclear ribonucleoprotein G [Arabidopsis thaliana]
AT2G24000	25.70	15.14	3.14	10.26	AT2G24000	GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0009742,brassinosteroid mediated signaling pathway; GO:0016787,hydrolase activity; 	--	NP_179978.2 serine carboxypeptidase-like 22 [Arabidopsis thaliana]
AT2G24050	30.80	27.66	63.46	64.57	AT2G24050	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005515,protein binding; GO:0006412,translation; GO:0006413,translational initiation; GO:0006417,regulation of translation; GO:0016281,eukaryotic translation initiation factor 4F complex; 	EIF4G; translation initiation factor 4G; K03260; 	NP_179983.1 MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana]
AT2G24210	220.44	251.42	105.26	102.84	AT2G24210	GO:0000287,magnesium ion binding; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009611,response to wounding; GO:0009753,response to jasmonic acid; GO:0010333,terpene synthase activity; GO:0016099,monoterpenoid biosynthetic process; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016829,lyase activity; GO:0034768,(E)-beta-ocimene synthase activity; GO:0046872,metal ion binding; GO:0050551,myrcene synthase activity; GO:0080027,response to herbivore; GO:0102701,tricyclene synthase activity; 	E4.2.3.15; myrcene/ocimene synthase [EC:4.2.3.15]; K12467; 	NP_179998.1 terpene synthase 10 [Arabidopsis thaliana]
AT2G24230	10.70	8.74	4.48	4.91	AT2G24230	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0106310,protein serine kinase activity; 	--	NP_850049.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]
AT2G24430	5.91	0.54	0.35	0.00	AT2G24430	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0006355,regulation of DNA-templated transcription; 	--	NP_180019.1 NAC domain containing protein 38 [Arabidopsis thaliana]
AT2G24450	23.90	16.19	11.61	5.15	AT2G24450	GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_180021.1 FASCICLIN-like arabinogalactan protein 3 precursor [Arabidopsis thaliana]
AT2G24580	24.35	20.17	9.71	15.95	AT2G24580	GO:0008115,sarcosine oxidase activity; GO:0016491,oxidoreductase activity; GO:0050660,flavin adenine dinucleotide binding; 	PIPOX; sarcosine oxidase / L-pipecolate oxidase [EC:1.5.3.1 1.5.3.7]; K00306; 	NP_180034.1 FAD-dependent oxidoreductase family protein [Arabidopsis thaliana]
AT2G24700	6.32	4.48	12.54	11.44	AT2G24700	GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005634,nucleus; 	--	NP_180046.2 Transcriptional factor B3 family protein [Arabidopsis thaliana]
AT2G25080	118.63	110.10	78.79	61.62	AT2G25080	GO:0004601,peroxidase activity; GO:0004602,glutathione peroxidase activity; GO:0005773,vacuole; GO:0006979,response to oxidative stress; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016491,oxidoreductase activity; GO:0047066,phospholipid-hydroperoxide glutathione peroxidase activity; GO:0098869,cellular oxidant detoxification; GO:0110165,cellular anatomical entity; 	gpx, btuE, bsaA; glutathione peroxidase [EC:1.11.1.9]; K00432; 	NP_180080.1 glutathione peroxidase 1 [Arabidopsis thaliana]
AT2G25185	8.34	4.17	0.00	0.00	AT2G25185	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001031411.1 Defensin-like (DEFL) family protein [Arabidopsis thaliana]
AT2G25210	145.78	110.63	227.46	228.15	AT2G25210	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; 	RP-L39e, RPL39; large subunit ribosomal protein L39e; K02924; 	NP_180093.1 Ribosomal protein L39 family protein [Arabidopsis thaliana]
AT2G25260	10.01	11.48	1.25	2.01	AT2G25260	GO:0005575,cellular_component; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0102562,hydroxyproline O-arbinofuranose transferase activity; GO:1990585,hydroxyproline O-arabinosyltransferase activity; 	HPAT; hydroxyproline O-arabinosyltransferase [EC:2.4.2.58]; K20782; 	NP_180098.3 Hyp O-arabinosyltransferase-like protein [Arabidopsis thaliana]
AT2G25280	50.01	42.62	30.05	14.86	AT2G25280	--	--	NP_565590.1 AmmeMemoRadiSam system protein B [Arabidopsis thaliana]
AT2G25640	3.00	3.29	7.48	10.73	AT2G25640	GO:0003674,molecular_function; GO:0003746,translation elongation factor activity; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006414,translational elongation; 	--	NP_180135.2 SPOC domain / Transcription elongation factor S-II protein [Arabidopsis thaliana]
AT2G25680	2.73	2.25	0.00	0.32	AT2G25680	GO:0000325,plant-type vacuole; GO:0005739,mitochondrion; GO:0015098,molybdate ion transmembrane transporter activity; GO:0015689,molybdate ion transport; GO:0016020,membrane; GO:0031966,mitochondrial membrane; 	--	NP_180139.1 molybdate transporter 1 [Arabidopsis thaliana]
AT2G25890	33.02	42.67	12.21	16.53	AT2G25890	GO:0003674,molecular_function; GO:0005811,lipid droplet; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0048608,reproductive structure development; 	--	NP_001324024.1 Oleosin family protein [Arabidopsis thaliana]
AT2G25980	26.03	5.15	2.25	3.21	AT2G25980	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; GO:0009506,plasmodesma; GO:0030246,carbohydrate binding; 	--	NP_001325173.1 Mannose-binding lectin superfamily protein [Arabidopsis thaliana]
AT2G26000	7.81	8.23	15.47	17.77	AT2G26000	GO:0000151,ubiquitin ligase complex; GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0007265,Ras protein signal transduction; GO:0008270,zinc ion binding; GO:0010029,regulation of seed germination; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0043130,ubiquitin binding; GO:0046872,metal ion binding; GO:0046982,protein heterodimerization activity; GO:0061630,ubiquitin protein ligase activity; 	BRAP; BRCA1-associated protein [EC:2.3.2.27]; K10632; 	NP_001031419.1 zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
AT2G26030	1.22	1.92	8.54	4.20	AT2G26030	GO:0005515,protein binding; GO:0008150,biological_process; 	--	NP_973535.1 F-box/RNI-like/FBD-like domains-containing protein [Arabidopsis thaliana]
AT2G26080	150.07	147.19	92.03	88.28	AT2G26080	GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0004375,glycine dehydrogenase (decarboxylating) activity; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005960,glycine cleavage complex; GO:0006544,glycine metabolic process; GO:0006546,glycine catabolic process; GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0016491,oxidoreductase activity; GO:0016594,glycine binding; GO:0019464,glycine decarboxylation via glycine cleavage system; GO:0030170,pyridoxal phosphate binding; 	GLDC, gcvP; glycine dehydrogenase [EC:1.4.4.2]; K00281; 	NP_180178.1 glycine decarboxylase P-protein 2 [Arabidopsis thaliana]
AT2G26530	1.96	1.89	8.84	5.46	AT2G26530	GO:0010038,response to metal ion; 	--	NP_180221.1 AR781, pheromone receptor-like protein (DUF1645) [Arabidopsis thaliana]
AT2G26730	56.05	50.67	34.65	33.57	AT2G26730	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005777,peroxisome; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; 	--	NP_180241.1 Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]
AT2G26900	184.96	195.96	87.79	107.57	AT2G26900	GO:0006849,plasma membrane pyruvate transport; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0050833,pyruvate transmembrane transporter activity; 	TC.BASS; bile acid:Na+ symporter, BASS family; K03453; 	NP_850089.1 Sodium Bile acid symporter family [Arabidopsis thaliana]
AT2G27050	8.54	10.86	5.19	3.71	AT2G27050	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009723,response to ethylene; GO:0009873,ethylene-activated signaling pathway; GO:0009970,cellular response to sulfate starvation; GO:0042742,defense response to bacterium; 	EIN3; ethylene-insensitive protein 3; K14514; 	NP_180273.1 ETHYLENE-INSENSITIVE3-like 1 [Arabidopsis thaliana]
AT2G27090	5.88	5.19	10.28	10.11	AT2G27090	GO:0005886,plasma membrane; GO:0009506,plasmodesma; 	--	NP_001324823.1 bZIP transcription factor (DUF630 and DUF632) [Arabidopsis thaliana]
AT2G27290	81.96	76.06	23.94	33.65	AT2G27290	GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; 	--	NP_565645.1 FAM210B-like protein, putative (DUF1279) [Arabidopsis thaliana]
AT2G27590	14.03	12.20	21.41	27.14	AT2G27590	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0008168,methyltransferase activity; GO:0032259,methylation; 	--	NP_565655.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT2G27840	40.86	41.75	105.28	81.56	AT2G27840	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006325,chromatin organization; GO:0010162,seed dormancy process; GO:0016787,hydrolase activity; GO:0045892,negative regulation of DNA-templated transcription; 	--	NP_565661.2 histone deacetylase-related / HD-like protein [Arabidopsis thaliana]
AT2G27880	17.45	22.02	14.31	12.03	AT2G27880	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0004521,endoribonuclease activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006417,regulation of translation; GO:0006952,defense response; GO:0009615,response to virus; GO:0009616,RNAi-mediated antiviral immune response; GO:0031047,gene silencing by RNA; GO:0035194,post-transcriptional gene silencing by RNA; GO:0046872,metal ion binding; GO:0051607,defense response to virus; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; GO:0098542,defense response to other organism; GO:1990904,ribonucleoprotein complex; 	ELF2C, AGO; eukaryotic translation initiation factor 2C; K11593; 	NP_850110.1 Argonaute family protein [Arabidopsis thaliana]
AT2G28140	3.68	2.02	10.61	14.32	AT2G28140	--	--	NP_180381.3 enabled-like protein (DUF1635) [Arabidopsis thaliana]
AT2G28350	13.14	11.23	5.18	5.41	AT2G28350	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0007389,pattern specification process; GO:0009725,response to hormone; GO:0009734,auxin-activated signaling pathway; GO:0009738,abscisic acid-activated signaling pathway; GO:0009743,response to carbohydrate; GO:0010154,fruit development; GO:0031540,regulation of anthocyanin biosynthetic process; GO:0035198,miRNA binding; GO:0048366,leaf development; GO:0048441,petal development; GO:0048442,sepal development; GO:0048589,developmental growth; GO:0048829,root cap development; GO:0051301,cell division; 	--	NP_180402.1 auxin response factor 10 [Arabidopsis thaliana]
AT2G28450	16.29	16.96	27.77	30.88	AT2G28450	GO:0000976,transcription cis-regulatory region binding; GO:0001510,RNA methylation; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0006396,RNA processing; GO:0008168,methyltransferase activity; GO:0008173,RNA methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0046872,metal ion binding; 	--	NP_180412.2 zinc finger (CCCH-type) family protein [Arabidopsis thaliana]
AT2G28630	143.91	114.09	75.46	60.63	AT2G28630	GO:0005783,endoplasmic reticulum; GO:0006633,fatty acid biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; 	KCS; 3-ketoacyl-CoA synthase [EC:2.3.1.199]; K15397; 	NP_001318305.1 3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana]
AT2G28740	468.58	463.84	311.49	257.23	AT2G28740	GO:0000325,plant-type vacuole; GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009414,response to water deprivation; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009579,thylakoid; GO:0030527,structural constituent of chromatin; GO:0046982,protein heterodimerization activity; 	H4; histone H4; K11254; 	GAV57897.1 Histone domain-containing protein, partial [Cephalotus follicularis]
AT2G28830	8.31	9.42	40.13	16.62	AT2G28830	GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0016567,protein ubiquitination; 	--	NP_001318308.1 armadillo/beta-catenin repeat protein [Arabidopsis thaliana]
AT2G29940	12.04	9.44	7.33	7.19	AT2G29940	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009738,abscisic acid-activated signaling pathway; GO:0010208,pollen wall assembly; GO:0010496,intercellular transport; GO:0015562,efflux transmembrane transporter activity; GO:0016020,membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0048581,negative regulation of post-embryonic development; GO:0055085,transmembrane transport; GO:0070505,pollen coat; GO:0080168,abscisic acid transport; GO:0140352,export from cell; GO:0140359,ABC-type transporter activity; GO:1901656,glycoside transport; 	ABCG2.PDR, CDR1; ATP-binding cassette, subfamily G (WHITE), member 2, PDR; K08711; 	NP_180555.2 pleiotropic drug resistance 3 [Arabidopsis thaliana]
AT2G29960	153.10	151.70	114.15	91.63	AT2G29960	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005737,cytoplasm; GO:0005771,multivesicular body; GO:0005777,peroxisome; GO:0005783,endoplasmic reticulum; GO:0005795,Golgi stack; GO:0005829,cytosol; GO:0006457,protein folding; GO:0016018,cyclosporin A binding; GO:0016020,membrane; GO:0016853,isomerase activity; GO:0043231,intracellular membrane-bounded organelle; GO:0061083,regulation of protein refolding; GO:0099503,secretory vesicle; 	E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]; K01802; 	NP_001318316.1 cyclophilin 5 [Arabidopsis thaliana]
AT2G30000	68.95	60.32	124.64	158.93	AT2G30000	GO:0000398,mRNA splicing, via spliceosome; GO:0005686,U2 snRNP; GO:0005689,U12-type spliceosomal complex; GO:0071011,precatalytic spliceosome; 	PHF5A; PHD finger-like domain-containing protein 5A; K12834; 	NP_001077473.1 PHF5-like protein [Arabidopsis thaliana]
AT2G30060	139.00	135.45	90.81	86.90	AT2G30060	GO:0005096,GTPase activator activity; GO:0005634,nucleus; GO:0005643,nuclear pore; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0006913,nucleocytoplasmic transport; GO:0015031,protein transport; GO:0046907,intracellular transport; GO:0050790,regulation of catalytic activity; GO:0051028,mRNA transport; 	--	NP_180567.1 Pleckstrin homology (PH) domain superfamily protein [Arabidopsis thaliana]
AT2G30310	1.30	2.86	20.31	13.26	AT2G30310	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_180590.1 GDSL-like Lipase/Acylhydrolase family protein [Arabidopsis thaliana]
AT2G30470	10.47	9.66	14.93	19.74	AT2G30470	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005739,mitochondrion; GO:0008270,zinc ion binding; GO:0009737,response to abscisic acid; GO:0009744,response to sucrose; GO:0045892,negative regulation of DNA-templated transcription; GO:0046872,metal ion binding; 	--	NP_850146.1 B3 domain-containing transcription repressor VAL1 [Arabidopsis thaliana]
AT2G30570	1514.72	1525.82	969.53	991.73	AT2G30570	GO:0003674,molecular_function; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0042549,photosystem II stabilization; 	psbW; photosystem II PsbW protein; K02721; 	NP_180615.1 photosystem II reaction center W [Arabidopsis thaliana]
AT2G30630	4.65	5.57	0.81	2.35	AT2G30630	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0008150,biological_process; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016787,hydrolase activity; 	--	NP_001325409.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT2G30800	8.65	9.57	15.66	12.57	AT2G30800	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	DHX36, RHAU; ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]; K14442; 	NP_850154.2 helicase in vascular tissue and tapetum [Arabidopsis thaliana]
AT2G31430	22.13	30.52	9.37	12.05	AT2G31430	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0010029,regulation of seed germination; GO:0030599,pectinesterase activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; GO:0048046,apoplast; 	--	NP_180701.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT2G31530	16.27	18.78	31.05	26.36	AT2G31530	GO:0005048,signal sequence binding; GO:0006616,SRP-dependent cotranslational protein targeting to membrane, translocation; GO:0008320,protein transmembrane transporter activity; GO:0009501,amyloplast; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0010027,thylakoid membrane organization; GO:0015031,protein transport; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0033097,amyloplast membrane; GO:0072598,protein localization to chloroplast; 	--	NP_180711.4 SecY protein transport family protein [Arabidopsis thaliana]
AT2G31740	18.99	17.71	35.33	35.72	AT2G31740	GO:0003674,molecular_function; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_850171.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT2G31980	490.21	468.61	184.68	197.37	AT2G31980	GO:0003674,molecular_function; GO:0004869,cysteine-type endopeptidase inhibitor activity; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0010466,negative regulation of peptidase activity; GO:0010951,negative regulation of endopeptidase activity; GO:0030414,peptidase inhibitor activity; 	--	NP_180758.1 PHYTOCYSTATIN 2 [Arabidopsis thaliana]
AT2G32220	30.43	27.14	89.32	65.92	AT2G32220	GO:0003735,structural constituent of ribosome; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L27e, RPL27; large subunit ribosomal protein L27e; K02901; 	NP_180781.1 Ribosomal L27e protein family [Arabidopsis thaliana]
AT2G32350	11.57	16.60	37.96	25.59	AT2G32350	GO:0005515,protein binding; GO:0005654,nucleoplasm; GO:0005829,cytosol; GO:0031593,polyubiquitin modification-dependent protein binding; GO:0043130,ubiquitin binding; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0070628,proteasome binding; 	--	NP_180794.2 Ubiquitin-like superfamily protein [Arabidopsis thaliana]
AT2G32790	3.07	8.20	23.38	22.75	AT2G32790	GO:0000209,protein polyubiquitination; GO:0005634,nucleus; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0061631,ubiquitin conjugating enzyme activity; 	--	NP_565754.1 Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]
AT2G33370	417.07	484.57	742.70	858.40	AT2G33370	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005730,nucleolus; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0070180,large ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L23e, RPL23; large subunit ribosomal protein L23e; K02894; 	NP_180895.1 Ribosomal protein L14p/L23e family protein [Arabidopsis thaliana]
AT2G33470	188.89	233.83	424.44	418.85	AT2G33470	GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006869,lipid transport; GO:0035627,ceramide transport; GO:0120009,intermembrane lipid transfer; GO:0120013,lipid transfer activity; GO:1902387,ceramide 1-phosphate binding; GO:1902388,ceramide 1-phosphate transfer activity; GO:1902389,ceramide 1-phosphate transport; 	--	NP_565766.1 glycolipid transfer protein 1 [Arabidopsis thaliana]
AT2G33510	19.81	27.22	38.41	47.26	AT2G33510	GO:0000166,nucleotide binding; GO:0004386,helicase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0016787,hydrolase activity; GO:0042335,cuticle development; 	--	NP_180909.2 ATP-dependent RNA helicase [Arabidopsis thaliana]
AT2G33580	4.35	6.45	2.71	0.22	AT2G33580	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0008061,chitin binding; GO:0016020,membrane; GO:0042803,protein homodimerization activity; GO:0045087,innate immune response; GO:0071323,cellular response to chitin; 	--	NP_180916.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT2G33770	7.74	8.79	13.87	15.93	AT2G33770	GO:0000139,Golgi membrane; GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0006817,phosphate ion transport; GO:0016020,membrane; GO:0016036,cellular response to phosphate starvation; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0016874,ligase activity; GO:0055062,phosphate ion homeostasis; GO:0061631,ubiquitin conjugating enzyme activity; GO:2000185,regulation of phosphate transmembrane transport; 	UBE2O; ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]; K10581; 	NP_850218.1 phosphate 2 [Arabidopsis thaliana]
AT2G34260	27.67	31.59	56.97	63.63	AT2G34260	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009553,embryo sac development; GO:0009793,embryo development ending in seed dormancy; GO:0009855,determination of bilateral symmetry; GO:0009960,endosperm development; GO:0010197,polar nucleus fusion; GO:0080186,developmental vegetative growth; 	--	NP_565782.1 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT2G34357	27.25	30.69	55.93	49.78	AT2G34357	GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; 	--	NP_973597.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT2G34420	756.89	814.14	406.80	444.69	AT2G34420	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; 	LHCB1; light-harvesting complex II chlorophyll a/b binding protein 1; K08912; 	NP_565786.1 photosystem II light harvesting complex protein B1B2 [Arabidopsis thaliana]
AT2G34430	56.45	47.26	20.64	25.45	AT2G34430	GO:0005783,endoplasmic reticulum; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; 	LHCB1; light-harvesting complex II chlorophyll a/b binding protein 1; K08912; 	NP_565787.1 light-harvesting chlorophyll-protein complex II subunit B1 [Arabidopsis thaliana]
AT2G34520	120.69	106.12	166.34	221.73	AT2G34520	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0015935,small ribosomal subunit; GO:0110165,cellular anatomical entity; GO:1990904,ribonucleoprotein complex; 	RP-S14, MRPS14, rpsN; small subunit ribosomal protein S14; K02954; 	NP_850232.1 mitochondrial ribosomal protein S14 [Arabidopsis thaliana]
AT2G34710	11.08	11.77	14.37	25.60	AT2G34710	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008289,lipid binding; GO:0009855,determination of bilateral symmetry; GO:0009944,polarity specification of adaxial/abaxial axis; GO:0009955,adaxial/abaxial pattern specification; GO:0010014,meristem initiation; GO:0010072,primary shoot apical meristem specification; GO:0030154,cell differentiation; GO:0080060,integument development; 	--	NP_181018.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana]
AT2G34860	57.63	55.08	28.87	21.65	AT2G34860	GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009561,megagametogenesis; GO:0009579,thylakoid; GO:0010027,thylakoid membrane organization; GO:0046872,metal ion binding; GO:0047134,protein-disulfide reductase (NAD(P)) activity; GO:0048564,photosystem I assembly; 	--	NP_001078004.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein [Arabidopsis thaliana]
AT2G34900	15.34	21.51	33.43	30.64	AT2G34900	GO:0000785,chromatin; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006338,chromatin remodeling; GO:0006355,regulation of DNA-templated transcription; GO:0010030,positive regulation of seed germination; GO:0045893,positive regulation of DNA-templated transcription; GO:0070577,lysine-acetylated histone binding; 	--	NP_181036.2 Transcription factor GTE6 [Arabidopsis thaliana]
AT2G35040	43.04	45.15	75.18	77.03	AT2G35040	GO:0003824,catalytic activity; GO:0003937,IMP cyclohydrolase activity; GO:0004643,phosphoribosylaminoimidazolecarboxamide formyltransferase activity; GO:0005829,cytosol; GO:0006164,purine nucleotide biosynthetic process; GO:0006189,'de novo' IMP biosynthetic process; GO:0008152,metabolic process; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010319,stromule; GO:0016740,transferase activity; GO:0016787,hydrolase activity; 	purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]; K00602; 	NP_850240.1 AICARFT/IMPCHase bienzyme family protein [Arabidopsis thaliana]
AT2G35200	0.00	0.00	4.45	1.43	AT2G35200	GO:0003674,molecular_function; 	--	NP_181064.1 DUF740 family protein [Arabidopsis thaliana]
AT2G35370	152.90	175.81	112.48	97.56	AT2G35370	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005960,glycine cleavage complex; GO:0009249,protein lipoylation; GO:0009579,thylakoid; GO:0019464,glycine decarboxylation via glycine cleavage system; 	gcvH, GCSH; glycine cleavage system H protein; K02437; 	NP_181080.1 glycine decarboxylase complex H [Arabidopsis thaliana]
AT2G35555	0.00	0.00	3.66	4.70	AT2G35555	GO:0004867,serine-type endopeptidase inhibitor activity; GO:0005615,extracellular space; GO:0010951,negative regulation of endopeptidase activity; 	--	NP_001323897.1 serpin [Arabidopsis thaliana]
AT2G35750	182.65	137.06	386.43	394.16	AT2G35750	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_181118.1 transmembrane protein [Arabidopsis thaliana]
AT2G35795	17.97	32.66	71.67	51.19	AT2G35795	GO:0001405,PAM complex, Tim23 associated import motor; GO:0001671,ATPase activator activity; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0016020,membrane; GO:0030150,protein import into mitochondrial matrix; 	--	NP_565824.1 Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]
AT2G36160	523.40	583.22	997.44	859.01	AT2G36160	GO:0000028,ribosomal small subunit assembly; GO:0000325,plant-type vacuole; GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:0048027,mRNA 5'-UTR binding; GO:0070181,small ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-S14e, RPS14; small subunit ribosomal protein S14e; K02955; 	NP_181158.1 Ribosomal protein S11 family protein [Arabidopsis thaliana]
AT2G36170	148.32	154.37	278.15	257.82	AT2G36170	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0016567,protein ubiquitination; GO:0019941,modification-dependent protein catabolic process; GO:0022625,cytosolic large ribosomal subunit; GO:0031386,protein tag; GO:0031625,ubiquitin protein ligase binding; GO:1990904,ribonucleoprotein complex; 	RP-L40e, RPL40, UBA52; ubiquitin-large subunit ribosomal protein L40e; K02927; 	NP_565836.1 60S ribosomal protein L40-1 [Arabidopsis thaliana]
AT2G36190	58.18	58.43	37.43	39.08	AT2G36190	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004564,beta-fructofuranosidase activity; GO:0004575,sucrose alpha-glucosidase activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0005982,starch metabolic process; GO:0005987,sucrose catabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0048046,apoplast; GO:0048481,plant ovule development; GO:0071836,nectar secretion; 	INV, sacA; beta-fructofuranosidase [EC:3.2.1.26]; K01193; 	NP_565837.1 cell wall invertase 4 [Arabidopsis thaliana]
AT2G36490	21.18	23.09	14.04	14.73	AT2G36490	GO:0003677,DNA binding; GO:0003824,catalytic activity; GO:0003906,DNA-(apurinic or apyrimidinic site) endonuclease activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006284,base-excision repair; GO:0006306,DNA methylation; GO:0016829,lyase activity; GO:0019104,DNA N-glycosylase activity; GO:0035514,DNA demethylase activity; GO:0046872,metal ion binding; GO:0050832,defense response to fungus; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0080111,DNA demethylation; GO:0140078,class I DNA-(apurinic or apyrimidinic site) endonuclease activity; 	--	NP_181190.3 demeter-like 1 [Arabidopsis thaliana]
AT2G36620	399.48	357.91	632.63	828.19	AT2G36620	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L24e, RPL24; large subunit ribosomal protein L24e; K02896; 	NP_565851.1 ribosomal protein L24 [Arabidopsis thaliana]
AT2G36660	6.40	3.52	1.84	0.47	AT2G36660	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003730,mRNA 3'-UTR binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006417,regulation of translation; GO:0008143,poly(A) binding; GO:0008266,poly(U) RNA binding; GO:1990904,ribonucleoprotein complex; 	PABPC; polyadenylate-binding protein; K13126; 	NP_181204.1 poly(A) binding protein 7 [Arabidopsis thaliana]
AT2G36790	1.73	2.08	4.31	9.62	AT2G36790	GO:0005783,endoplasmic reticulum; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0051555,flavonol biosynthetic process; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0080046,quercetin 4'-O-glucosyltransferase activity; 	UGT73C6; flavonol-3-O-L-rhamnoside-7-O-glucosyltransferase [EC:2.4.1.-]; K22771; 	NP_181217.1 UDP-glucosyl transferase 73C6 [Arabidopsis thaliana]
AT2G36885	62.29	46.09	21.88	25.88	AT2G36885	GO:0003674,molecular_function; GO:0003743,translation initiation factor activity; GO:0005886,plasma membrane; GO:0006413,translational initiation; GO:0016020,membrane; 	--	NP_565853.1 translation initiation factor [Arabidopsis thaliana]
AT2G36930	34.54	31.06	71.22	69.03	AT2G36930	GO:0003676,nucleic acid binding; GO:0005575,cellular_component; GO:0008270,zinc ion binding; GO:0010468,regulation of gene expression; GO:0046872,metal ion binding; 	--	NP_565854.1 zinc finger (C2H2 type) family protein [Arabidopsis thaliana]
AT2G36985	0.00	0.00	8.33	18.74	AT2G36985	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0008285,negative regulation of cell population proliferation; GO:0009416,response to light stimulus; GO:0016020,membrane; GO:0042127,regulation of cell population proliferation; GO:0048367,shoot system development; 	--	NP_973616.1 DVL family protein [Arabidopsis thaliana]
AT2G36990	27.79	27.10	48.44	36.41	AT2G36990	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0006352,DNA-templated transcription initiation; GO:0006355,regulation of DNA-templated transcription; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016987,sigma factor activity; GO:0045893,positive regulation of DNA-templated transcription; GO:0071482,cellular response to light stimulus; GO:0071483,cellular response to blue light; GO:0090351,seedling development; GO:2000142,regulation of DNA-templated transcription initiation; 	--	NP_565856.1 RNApolymerase sigma-subunit F [Arabidopsis thaliana]
AT2G37040	188.68	198.51	124.88	125.68	AT2G37040	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006559,L-phenylalanine catabolic process; GO:0006952,defense response; GO:0006979,response to oxidative stress; GO:0009555,pollen development; GO:0009698,phenylpropanoid metabolic process; GO:0009800,cinnamic acid biosynthetic process; GO:0009819,drought recovery; GO:0010224,response to UV-B; GO:0016829,lyase activity; GO:0016841,ammonia-lyase activity; GO:0045548,phenylalanine ammonia-lyase activity; GO:0046244,salicylic acid catabolic process; GO:0046274,lignin catabolic process; 	PAL; phenylalanine ammonia-lyase [EC:4.3.1.24]; K10775; 	NP_181241.1 PHE ammonia lyase 1 [Arabidopsis thaliana]
AT2G37110	137.55	129.64	76.38	85.69	AT2G37110	--	--	NP_565858.1 PLAC8 family protein [Arabidopsis thaliana]
AT2G37120	62.88	55.74	169.45	103.29	AT2G37120	GO:0003674,molecular_function; GO:0003677,DNA binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0016020,membrane; 	--	NP_565859.1 S1FA-like DNA-binding protein [Arabidopsis thaliana]
AT2G37130	87.62	75.37	150.21	197.07	AT2G37130	GO:0004601,peroxidase activity; GO:0005576,extracellular region; GO:0006979,response to oxidative stress; GO:0009505,plant-type cell wall; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0042744,hydrogen peroxide catabolic process; GO:0046872,metal ion binding; GO:0048511,rhythmic process; GO:0050832,defense response to fungus; GO:0098869,cellular oxidant detoxification; GO:0140825,lactoperoxidase activity; 	E1.11.1.7; peroxidase [EC:1.11.1.7]; K00430; 	NP_181250.1 Peroxidase superfamily protein [Arabidopsis thaliana]
AT2G37190	459.69	434.83	882.35	882.35	AT2G37190	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0006412,translation; GO:0008270,zinc ion binding; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0015934,large ribosomal subunit; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0070180,large ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L12e, RPL12; large subunit ribosomal protein L12e; K02870; 	NP_181256.1 Ribosomal protein L11 family protein [Arabidopsis thaliana]
AT2G37195	4.34	3.58	0.00	0.00	AT2G37195	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_001323532.1 acyl-CoA-binding domain protein [Arabidopsis thaliana]
AT2G37270	800.49	654.08	1219.46	1239.56	AT2G37270	GO:0000028,ribosomal small subunit assembly; GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S5e, RPS5; small subunit ribosomal protein S5e; K02989; 	NP_001031502.1 ribosomal protein 5B [Arabidopsis thaliana]
AT2G37300	4.08	1.38	14.00	8.71	AT2G37300	GO:0003674,molecular_function; GO:0016020,membrane; 	--	NP_001325186.1 transmembrane protein [Arabidopsis thaliana]
AT2G37340	39.05	36.00	63.86	62.04	AT2G37340	GO:0000245,spliceosomal complex assembly; GO:0000398,mRNA splicing, via spliceosome; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0006397,mRNA processing; GO:0008270,zinc ion binding; GO:0008380,RNA splicing; GO:0016607,nuclear speck; GO:0046872,metal ion binding; 	SFRS7; splicing factor, arginine/serine-rich 7; K12896; 	NP_850280.1 arginine/serine-rich zinc knuckle-containing protein 33 [Arabidopsis thaliana]
AT2G37420	12.92	10.65	18.71	17.94	AT2G37420	GO:0000070,mitotic sister chromatid segregation; GO:0000166,nucleotide binding; GO:0003777,microtubule motor activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005819,spindle; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0005876,spindle microtubule; GO:0007018,microtubule-based movement; GO:0008017,microtubule binding; GO:0008574,plus-end-directed microtubule motor activity; GO:0051231,spindle elongation; GO:0072686,mitotic spindle; GO:0090307,mitotic spindle assembly; 	--	NP_001323679.1 ATP binding microtubule motor family protein [Arabidopsis thaliana]
AT2G37480	22.43	29.93	78.45	74.16	AT2G37480	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_850283.1 hypothetical protein AT2G37480 [Arabidopsis thaliana]
AT2G37600	173.32	190.49	342.38	338.68	AT2G37600	GO:0002181,cytoplasmic translation; GO:0003735,structural constituent of ribosome; GO:0005783,endoplasmic reticulum; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L36e, RPL36; large subunit ribosomal protein L36e; K02920; 	NP_001078017.1 Ribosomal protein L36e family protein [Arabidopsis thaliana]
AT2G37690	14.82	17.22	34.99	33.28	AT2G37690	GO:0000166,nucleotide binding; GO:0004638,phosphoribosylaminoimidazole carboxylase activity; GO:0005524,ATP binding; GO:0006164,purine nucleotide biosynthetic process; GO:0006189,'de novo' IMP biosynthetic process; GO:0009507,chloroplast; GO:0009555,pollen development; GO:0009570,chloroplast stroma; GO:0016829,lyase activity; GO:0016831,carboxy-lyase activity; GO:0043727,5-amino-4-imidazole carboxylate lyase activity; GO:0046872,metal ion binding; 	ADE2; phosphoribosylaminoimidazole carboxylase [EC:4.1.1.21]; K11808; 	NP_181305.2 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase [Arabidopsis thaliana]
AT2G37880	1.26	4.15	0.00	0.00	AT2G37880	GO:0010274,hydrotropism; 	--	NP_565873.1 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [Arabidopsis thaliana]
AT2G37990	46.03	45.20	83.57	79.33	AT2G37990	GO:0000055,ribosomal large subunit export from nucleus; GO:0000447,endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_565878.1 ribosome biogenesis regulatory protein (RRS1) family protein [Arabidopsis thaliana]
AT2G38010	35.16	36.15	24.40	22.25	AT2G38010	GO:0005576,extracellular region; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0006629,lipid metabolic process; GO:0006665,sphingolipid metabolic process; GO:0009506,plasmodesma; GO:0016787,hydrolase activity; GO:0017040,N-acylsphingosine amidohydrolase activity; GO:0042759,long-chain fatty acid biosynthetic process; GO:0046512,sphingosine biosynthetic process; GO:0046514,ceramide catabolic process; GO:0102121,ceramidase activity; 	ASAH2; neutral ceramidase [EC:3.5.1.23]; K12349; 	NP_973628.1 Neutral/alkaline non-lysosomal ceramidase [Arabidopsis thaliana]
AT2G38270	53.13	42.63	24.49	29.51	AT2G38270	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005759,mitochondrial matrix; GO:0006812,cation transport; GO:0008152,metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; 	--	NP_565885.1 CAX-interacting protein 2 [Arabidopsis thaliana]
AT2G38290	8.70	8.66	3.54	1.82	AT2G38290	GO:0005886,plasma membrane; GO:0005887,integral component of plasma membrane; GO:0006812,cation transport; GO:0008519,ammonium transmembrane transporter activity; GO:0009506,plasmodesma; GO:0009624,response to nematode; GO:0015398,high-affinity secondary active ammonium transmembrane transporter activity; GO:0016020,membrane; GO:0071705,nitrogen compound transport; GO:0072488,ammonium transmembrane transport; 	--	NP_181363.1 ammonium transporter 2 [Arabidopsis thaliana]
AT2G38330	5.83	7.07	1.94	0.83	AT2G38330	GO:0009507,chloroplast; GO:0009536,plastid; GO:0015297,antiporter activity; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0042908,xenobiotic transport; GO:0042910,xenobiotic transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_181367.2 MATE efflux family protein [Arabidopsis thaliana]
AT2G38860	7.63	8.39	1.69	1.81	AT2G38860	GO:0005794,Golgi apparatus; GO:0006541,glutamine metabolic process; 	DJ1D; D-lactate dehydratase [EC:4.2.1.130]; K18881; 	NP_850303.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]
AT2G38995	20.50	19.72	10.42	8.65	AT2G38995	GO:0004144,diacylglycerol O-acyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0008374,O-acyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019432,triglyceride biosynthetic process; GO:0045017,glycerolipid biosynthetic process; GO:0047196,long-chain-alcohol O-fatty-acyltransferase activity; GO:0102966,arachidoyl-CoA:1-dodecanol O-acyltransferase activity; 	--	NP_001324139.1 O-acyltransferase (WSD1-like) family protein [Arabidopsis thaliana]
AT2G39060	81.71	77.22	45.60	34.62	AT2G39060	GO:0005515,protein binding; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0008515,sucrose transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:0012506,vesicle membrane; GO:0015770,sucrose transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0031410,cytoplasmic vesicle; GO:0032588,trans-Golgi network membrane; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0071836,nectar secretion; 	--	NP_181439.1 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT2G39310	0.00	0.00	0.98	2.21	AT2G39310	GO:0030246,carbohydrate binding; 	--	NP_001154564.1 jacalin-related lectin 22 [Arabidopsis thaliana]
AT2G39390	81.88	110.06	211.36	166.76	AT2G39390	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005794,Golgi apparatus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L35e, RPL35; large subunit ribosomal protein L35e; K02918; 	NP_181471.1 Ribosomal L29 family protein [Arabidopsis thaliana]
AT2G39440	13.42	10.01	39.33	34.60	AT2G39440	GO:0006401,RNA catabolic process; GO:0032299,ribonuclease H2 complex; 	RNASEH2C; ribonuclease H2 subunit C; K10745; 	NP_001323596.1 ribonuclease H2 subunit C-like protein [Arabidopsis thaliana]
AT2G39460	898.87	979.07	1698.85	1490.82	AT2G39460	GO:0000027,ribosomal large subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005794,Golgi apparatus; GO:0005840,ribosome; GO:0006412,translation; GO:0006979,response to oxidative stress; GO:0009409,response to cold; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009644,response to high light intensity; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L23Ae, RPL23A; large subunit ribosomal protein L23Ae; K02893; 	NP_001154565.1 ribosomal protein L23AA [Arabidopsis thaliana]
AT2G39650	3.93	3.46	16.61	15.04	AT2G39650	--	--	NP_181495.1 cruciferin (DUF506) [Arabidopsis thaliana]
AT2G39850	18.42	24.45	11.02	8.57	AT2G39850	GO:0004252,serine-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; 	--	NP_565915.2 Subtilisin-like serine endopeptidase family protein [Arabidopsis thaliana]
AT2G39910	10.54	9.62	4.63	4.63	AT2G39910	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_565917.2 ARM repeat superfamily protein [Arabidopsis thaliana]
AT2G39960	127.46	88.06	60.03	68.18	AT2G39960	GO:0003674,molecular_function; GO:0005783,endoplasmic reticulum; GO:0005787,signal peptidase complex; GO:0005789,endoplasmic reticulum membrane; GO:0006465,signal peptide processing; GO:0008233,peptidase activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0045047,protein targeting to ER; 	SPCS2, SPC2; signal peptidase complex subunit 2 [EC:3.4.-.-]; K12947; 	NP_181525.2 Microsomal signal peptidase 25 kDa subunit (SPC25) [Arabidopsis thaliana]
AT2G40100	196.31	197.83	99.77	101.02	AT2G40100	GO:0005794,Golgi apparatus; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0046872,metal ion binding; 	LHCB4; light-harvesting complex II chlorophyll a/b binding protein 4; K08915; 	NP_181539.1 light harvesting complex photosystem II [Arabidopsis thaliana]
AT2G40110	58.18	58.81	37.41	26.93	AT2G40110	GO:0000151,ubiquitin ligase complex; GO:0003674,molecular_function; GO:0046872,metal ion binding; 	--	NP_001324480.1 Yippee family putative zinc-binding protein [Arabidopsis thaliana]
AT2G40190	20.03	19.24	9.21	13.09	AT2G40190	GO:0004377,GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006486,protein glycosylation; GO:0006487,protein N-linked glycosylation; GO:0006490,oligosaccharide-lipid intermediate biosynthetic process; GO:0006970,response to osmotic stress; GO:0009737,response to abscisic acid; GO:0009832,plant-type cell wall biogenesis; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0097502,mannosylation; 	ALG11; alpha-1,2-mannosyltransferase [EC:2.4.1.131]; K03844; 	NP_181548.2 UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]
AT2G40205	663.82	696.59	1155.11	1123.46	AT2G40205	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	RP-L41e, RPL41; large subunit ribosomal protein L41e; K02928; 	--
AT2G40290	180.14	137.53	78.61	89.88	AT2G40290	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005634,nucleus; GO:0005794,Golgi apparatus; GO:0005850,eukaryotic translation initiation factor 2 complex; GO:0005851,eukaryotic translation initiation factor 2B complex; GO:0006412,translation; GO:0006413,translational initiation; GO:0008150,biological_process; GO:0033290,eukaryotic 48S preinitiation complex; GO:0043022,ribosome binding; GO:0043614,multi-eIF complex; 	EIF2S1; translation initiation factor 2 subunit 1; K03237; 	NP_565927.1 Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana]
AT2G40360	48.06	51.00	107.71	101.64	AT2G40360	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0007276,gamete generation; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; GO:0043021,ribonucleoprotein complex binding; GO:0051302,regulation of cell division; GO:0070545,PeBoW complex; 	--	NP_001324711.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT2G40370	6.05	2.95	8.91	11.20	AT2G40370	GO:0005507,copper ion binding; GO:0005576,extracellular region; GO:0016491,oxidoreductase activity; GO:0046274,lignin catabolic process; GO:0046688,response to copper ion; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0048226,Casparian strip; GO:0052716,hydroquinone:oxygen oxidoreductase activity; 	E1.10.3.2; laccase [EC:1.10.3.2]; K05909; 	NP_181568.1 laccase 5 [Arabidopsis thaliana]
AT2G40390	4.40	1.73	0.68	0.00	AT2G40390	GO:0008150,biological_process; 	--	NP_181570.2 neuronal PAS domain protein [Arabidopsis thaliana]
AT2G40590	37.27	26.01	63.06	88.73	AT2G40590	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S26e, RPS26; small subunit ribosomal protein S26e; K02976; 	NP_181591.1 Ribosomal protein S26e family protein [Arabidopsis thaliana]
AT2G40600	12.11	10.98	27.47	22.42	AT2G40600	GO:0005794,Golgi apparatus; GO:0009507,chloroplast; 	MACROD, ymdB; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]; K23518; 	NP_030605.2 appr-1-p processing enzyme family protein [Arabidopsis thaliana]
AT2G40610	321.30	265.28	173.60	189.01	AT2G40610	GO:0005576,extracellular region; GO:0006949,syncytium formation; GO:0009635,response to herbicide; GO:0009653,anatomical structure morphogenesis; GO:0009664,plant-type cell wall organization; GO:0016020,membrane; GO:0071555,cell wall organization; 	--	NP_181593.1 expansin A8 [Arabidopsis thaliana]
AT2G40765	61.94	56.24	151.27	107.21	AT2G40765	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005750,mitochondrial respiratory chain complex III; GO:0005829,cytosol; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_565941.1 transmembrane protein [Arabidopsis thaliana]
AT2G40770	3.94	3.09	1.96	1.65	AT2G40770	GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005575,cellular_component; GO:0006338,chromatin remodeling; GO:0008150,biological_process; GO:0046872,metal ion binding; GO:0140658,ATP-dependent chromatin remodeler activity; 	--	NP_001318395.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana]
AT2G41040	82.30	88.51	51.94	33.59	AT2G41040	GO:0006744,ubiquinone biosynthetic process; GO:0008168,methyltransferase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0010287,plastoglobule; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_181637.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT2G41380	18.51	18.44	2.92	6.96	AT2G41380	GO:0005739,mitochondrion; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_181669.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT2G41650	359.01	338.22	607.74	673.38	AT2G41650	GO:0008150,biological_process; GO:0009507,chloroplast; 	--	NP_181696.1 hypothetical protein AT2G41650 [Arabidopsis thaliana]
AT2G41760	1.76	3.09	9.12	9.77	AT2G41760	GO:0005634,nucleus; GO:0005829,cytosol; GO:0006952,defense response; GO:0008418,protein-N-terminal asparagine amidohydrolase activity; GO:0016787,hydrolase activity; GO:0016811,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; GO:0042742,defense response to bacterium; GO:0070773,protein-N-terminal glutamine amidohydrolase activity; GO:1901183,positive regulation of camalexin biosynthetic process; 	NTAQ1; protein N-terminal glutamine amidohydrolase [EC:3.5.1.122]; K21286; 	NP_565959.1 amino-terminal glutamine amidohydrolase [Arabidopsis thaliana]
AT2G41980	9.70	7.29	2.57	2.84	AT2G41980	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005771,multivesicular body; GO:0005776,autophagosome; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0007275,multicellular organism development; GO:0008270,zinc ion binding; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0031410,cytoplasmic vesicle; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:2000785,regulation of autophagosome assembly; 	SIAH1; E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]; K04506; 	NP_181729.1 Protein with RING/U-box and TRAF-like domain [Arabidopsis thaliana]
AT2G42220	83.41	79.99	39.73	50.46	AT2G42220	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0016020,membrane; 	--	NP_565969.1 Rhodanese/Cell cycle control phosphatase superfamily protein [Arabidopsis thaliana]
AT2G42490	30.86	32.81	53.56	50.25	AT2G42490	GO:0002237,response to molecule of bacterial origin; GO:0005507,copper ion binding; GO:0005515,protein binding; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0008131,primary amine oxidase activity; GO:0009308,amine metabolic process; GO:0009447,putrescine catabolic process; GO:0009611,response to wounding; GO:0009737,response to abscisic acid; GO:0009751,response to salicylic acid; GO:0009753,response to jasmonic acid; GO:0010311,lateral root formation; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; GO:0048038,quinone binding; GO:0052593,tryptamine:oxygen oxidoreductase (deaminating) activity; GO:0052594,aminoacetone:oxygen oxidoreductase(deaminating) activity; GO:0052595,aliphatic amine oxidase activity; GO:0052596,phenethylamine:oxygen oxidoreductase (deaminating) activity; 	AOC3, AOC2, tynA; primary-amine oxidase [EC:1.4.3.21]; K00276; 	NP_181777.2 Copper amine oxidase family protein [Arabidopsis thaliana]
AT2G42590	287.67	348.90	215.25	211.70	AT2G42590	GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0007165,signal transduction; GO:0048528,post-embryonic root development; 	YWHAE; 14-3-3 protein epsilon; K06630; 	NP_565977.1 general regulatory factor 9 [Arabidopsis thaliana]
AT2G42865	2.82	11.38	0.00	0.00	AT2G42865	--	--	NP_001324793.1 hypothetical protein AT2G42865 [Arabidopsis thaliana]
AT2G42940	14.83	18.30	2.62	3.92	AT2G42940	GO:0003677,DNA binding; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0010208,pollen wall assembly; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0010529,negative regulation of transposition; GO:0031490,chromatin DNA binding; GO:0035067,negative regulation of histone acetylation; GO:1900111,positive regulation of histone H3-K9 dimethylation; 	--	NP_181822.1 Putative AT-hook DNA-binding family protein [Arabidopsis thaliana]
AT2G42990	60.30	70.43	38.14	44.08	AT2G42990	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_181827.2 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT2G43010	11.64	13.51	26.55	29.34	AT2G43010	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009585,red, far-red light phototransduction; GO:0009638,phototropism; GO:0009704,de-etiolation; GO:0010017,red or far-red light signaling pathway; GO:0010161,red light signaling pathway; GO:0010244,response to low fluence blue light stimulus by blue low-fluence system; GO:0010600,regulation of auxin biosynthetic process; GO:0010928,regulation of auxin mediated signaling pathway; GO:0046983,protein dimerization activity; GO:1990841,promoter-specific chromatin binding; 	PIF4; phytochrome-interacting factor 4; K16189; 	NP_001323428.1 phytochrome interacting factor 4 [Arabidopsis thaliana]
AT2G43030	139.54	147.37	69.06	80.28	AT2G43030	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L3, MRPL3, rplC; large subunit ribosomal protein L3; K02906; 	NP_181831.1 Ribosomal protein L3 family protein [Arabidopsis thaliana]
AT2G43100	0.30	1.34	3.50	6.75	AT2G43100	GO:0003861,3-isopropylmalate dehydratase activity; GO:0008652,cellular amino acid biosynthetic process; GO:0009082,branched-chain amino acid biosynthetic process; GO:0009098,leucine biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016829,lyase activity; GO:0016836,hydro-lyase activity; GO:0019761,glucosinolate biosynthetic process; GO:0043436,oxoacid metabolic process; 	MAM-IS, IPMI2; 3-isopropylmalate/methylthioalkylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.170]; K21359; 	NP_181838.1 isopropylmalate isomerase 2 [Arabidopsis thaliana]
AT2G43190	5.78	6.07	18.56	12.66	AT2G43190	GO:0000172,ribonuclease MRP complex; GO:0001682,tRNA 5'-leader removal; GO:0003723,RNA binding; GO:0004526,ribonuclease P activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0008033,tRNA processing; GO:0030677,ribonuclease P complex; GO:0033204,ribonuclease P RNA binding; GO:0034470,ncRNA processing; GO:0090501,RNA phosphodiester bond hydrolysis; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; 	POP4, RPP29; ribonuclease P protein subunit POP4 [EC:3.1.26.5]; K03538; 	NP_001324792.1 ribonuclease P family protein [Arabidopsis thaliana]
AT2G43540	5.05	2.52	16.54	11.06	AT2G43540	GO:0016020,membrane; 	--	NP_566001.1 transmembrane protein [Arabidopsis thaliana]
AT2G43560	42.88	49.43	22.60	18.72	AT2G43560	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0016853,isomerase activity; GO:0031977,thylakoid lumen; 	E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]; K01802; 	NP_181884.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT2G43620	17.05	22.97	9.11	8.15	AT2G43620	GO:0000272,polysaccharide catabolic process; GO:0004568,chitinase activity; GO:0005975,carbohydrate metabolic process; GO:0006032,chitin catabolic process; GO:0006952,defense response; GO:0008061,chitin binding; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016998,cell wall macromolecule catabolic process; GO:0048046,apoplast; GO:0099503,secretory vesicle; 	E3.2.1.14; chitinase [EC:3.2.1.14]; K01183; 	NP_181890.1 Chitinase family protein [Arabidopsis thaliana]
AT2G43640	18.56	23.92	52.55	39.11	AT2G43640	GO:0003723,RNA binding; GO:0005737,cytoplasm; GO:0005786,signal recognition particle, endoplasmic reticulum targeting; GO:0005829,cytosol; GO:0006614,SRP-dependent cotranslational protein targeting to membrane; GO:0008312,7S RNA binding; GO:0030942,endoplasmic reticulum signal peptide binding; GO:0045047,protein targeting to ER; GO:0048500,signal recognition particle; GO:1990904,ribonucleoprotein complex; 	SRP14; signal recognition particle subunit SRP14; K03104; 	NP_001189744.1 Signal recognition particle, SRP9/SRP14 subunit [Arabidopsis thaliana]
AT2G43650	15.02	19.66	35.20	34.00	AT2G43650	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006325,chromatin organization; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:1990904,ribonucleoprotein complex; 	--	NP_850397.1 Sas10/U3 ribonucleoprotein (Utp) family protein [Arabidopsis thaliana]
AT2G44080	44.22	29.66	83.53	57.42	AT2G44080	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0009725,response to hormone; GO:0009741,response to brassinosteroid; GO:0009825,multidimensional cell growth; GO:0016020,membrane; GO:0035265,organ growth; GO:0046622,positive regulation of organ growth; 	--	NP_850409.1 ARGOS-like protein [Arabidopsis thaliana]
AT2G44120	238.38	240.89	472.61	427.40	AT2G44120	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005840,ribosome; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L7e, RPL7; large subunit ribosomal protein L7e; K02937; 	NP_850410.1 Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]
AT2G44140	14.58	12.11	35.47	24.90	AT2G44140	GO:0004175,endopeptidase activity; GO:0005575,cellular_component; GO:0005737,cytoplasm; GO:0006508,proteolysis; GO:0006914,autophagy; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0015031,protein transport; GO:0016787,hydrolase activity; GO:0019786,Atg8-specific peptidase activity; 	ATG4; cysteine protease ATG4 [EC:3.4.22.-]; K08342; 	NP_001324765.1 Peptidase family C54 protein [Arabidopsis thaliana]
AT2G44270	12.94	18.32	29.07	37.37	AT2G44270	GO:0000049,tRNA binding; GO:0002098,tRNA wobble uridine modification; GO:0002143,tRNA wobble position uridine thiolation; GO:0002144,cytosolic tRNA wobble base thiouridylase complex; GO:0003723,RNA binding; GO:0005737,cytoplasm; GO:0008033,tRNA processing; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0032447,protein urmylation; GO:0034227,tRNA thio-modification; 	CTU1, NCS6; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]; K14168; 	NP_181956.2 repressor of lrx1 [Arabidopsis thaliana]
AT2G44360	9.76	10.10	30.60	36.15	AT2G44360	GO:0005575,cellular_component; 	--	NP_181964.1 ecotropic viral integration site protein [Arabidopsis thaliana]
AT2G45000	7.60	7.19	15.96	15.83	AT2G45000	GO:0005515,protein binding; GO:0005543,phospholipid binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005643,nuclear pore; GO:0005829,cytosol; GO:0006405,RNA export from nucleus; GO:0006606,protein import into nucleus; GO:0010930,negative regulation of auxin mediated signaling pathway; GO:0015031,protein transport; GO:0017056,structural constituent of nuclear pore; GO:0034399,nuclear periphery; GO:0044613,nuclear pore central transport channel; GO:0051028,mRNA transport; 	NUP62, NSP1; nuclear pore complex protein Nup62; K14306; 	NP_850429.1 structural constituent of nuclear pore [Arabidopsis thaliana]
AT2G45200	55.39	51.57	106.38	71.18	AT2G45200	GO:0000139,Golgi membrane; GO:0000325,plant-type vacuole; GO:0005484,SNAP receptor activity; GO:0005768,endosome; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005801,cis-Golgi network; GO:0005802,trans-Golgi network; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0006906,vesicle fusion; GO:0015031,protein transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016192,vesicle-mediated transport; GO:0031201,SNARE complex; GO:0110165,cellular anatomical entity; 	GOSR1, GOS1; golgi SNAP receptor complex member 1; K08495; 	NP_182045.1 golgi snare 12 [Arabidopsis thaliana]
AT2G45220	7.17	13.75	21.09	33.04	AT2G45220	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0009617,response to bacterium; GO:0009620,response to fungus; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; GO:0050829,defense response to Gram-negative bacterium; GO:0071555,cell wall organization; 	E3.1.1.11; pectinesterase [EC:3.1.1.11]; K01051; 	NP_566038.1 Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]
AT2G45520	27.30	22.50	50.23	43.52	AT2G45520	GO:0008150,biological_process; 	--	NP_566044.1 coiled-coil protein [Arabidopsis thaliana]
AT2G45710	145.17	154.50	280.54	318.13	AT2G45710	GO:0000028,ribosomal small subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S27e, RPS27; small subunit ribosomal protein S27e; K02978; 	NP_182095.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT2G45860	59.55	43.99	109.67	139.18	AT2G45860	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_182110.1 hypothetical protein AT2G45860 [Arabidopsis thaliana]
AT2G45930	0.00	0.72	1.41	6.63	AT2G45930	--	--	NP_566057.1 hypothetical protein AT2G45930 [Arabidopsis thaliana]
AT2G46140	87.45	76.58	41.09	31.17	AT2G46140	GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009269,response to desiccation; 	--	NP_182137.1 Late embryogenesis abundant protein [Arabidopsis thaliana]
AT2G46200	5.01	2.87	7.22	13.37	AT2G46200	GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:1990904,ribonucleoprotein complex; 	--	NP_850448.1 U11/U12 small nuclear ribonucleoprotein [Arabidopsis thaliana]
AT2G46280	109.94	111.64	185.46	188.50	AT2G46280	GO:0001732,formation of cytoplasmic translation initiation complex; GO:0002183,cytoplasmic translational initiation; GO:0003723,RNA binding; GO:0003743,translation initiation factor activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005852,eukaryotic translation initiation factor 3 complex; GO:0006412,translation; GO:0006413,translational initiation; GO:0016282,eukaryotic 43S preinitiation complex; GO:0033290,eukaryotic 48S preinitiation complex; GO:0071541,eukaryotic translation initiation factor 3 complex, eIF3m; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	EIF3I; translation initiation factor 3 subunit I; K03246; 	NP_182151.1 TGF-beta receptor interacting protein 1 [Arabidopsis thaliana]
AT2G46290	16.67	15.91	30.33	27.21	AT2G46290	GO:0001732,formation of cytoplasmic translation initiation complex; GO:0002183,cytoplasmic translational initiation; GO:0003723,RNA binding; GO:0003743,translation initiation factor activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005852,eukaryotic translation initiation factor 3 complex; GO:0006412,translation; GO:0006413,translational initiation; GO:0009506,plasmodesma; GO:0016282,eukaryotic 43S preinitiation complex; GO:0033290,eukaryotic 48S preinitiation complex; GO:0071541,eukaryotic translation initiation factor 3 complex, eIF3m; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	EIF3I; translation initiation factor 3 subunit I; K03246; 	NP_182152.2 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT2G46600	223.95	240.46	276.24	473.15	AT2G46600	GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0010091,trichome branching; GO:0046872,metal ion binding; 	--	NP_566082.1 Calcium-binding EF-hand family protein [Arabidopsis thaliana]
AT2G46650	13.51	16.13	54.97	53.28	AT2G46650	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005829,cytosol; GO:0016020,membrane; GO:0020037,heme binding; GO:0043231,intracellular membrane-bounded organelle; GO:0046872,metal ion binding; 	CYB5; cytochrome b5; K23490; 	NP_182188.1 cytochrome B5 isoform C [Arabidopsis thaliana]
AT2G46700	4.72	5.33	9.63	16.74	AT2G46700	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004683,calmodulin-dependent protein kinase activity; GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006468,protein phosphorylation; GO:0009931,calcium-dependent protein serine/threonine kinase activity; GO:0010150,leaf senescence; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018105,peptidyl-serine phosphorylation; GO:0035556,intracellular signal transduction; GO:0046777,protein autophosphorylation; GO:0046872,metal ion binding; GO:0071215,cellular response to abscisic acid stimulus; GO:0106310,protein serine kinase activity; 	--	NP_182193.1 CDPK-related kinase 3 [Arabidopsis thaliana]
AT2G46820	551.14	594.47	349.66	315.65	AT2G46820	GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009515,granal stacked thylakoid; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009773,photosynthetic electron transport in photosystem I; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019904,protein domain specific binding; GO:0030093,chloroplast photosystem I; GO:0042644,chloroplast nucleoid; GO:0090391,granum assembly; GO:0097753,membrane bending; 	--	NP_001031551.1 photosystem I P subunit [Arabidopsis thaliana]
AT2G46910	36.72	45.78	18.55	16.24	AT2G46910	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009536,plastid; GO:0010287,plastoglobule; 	--	NP_566091.1 Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana]
AT2G47110	623.78	581.29	1291.41	1235.54	AT2G47110	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0019941,modification-dependent protein catabolic process; GO:0022627,cytosolic small ribosomal subunit; GO:0031386,protein tag; GO:0031625,ubiquitin protein ligase binding; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S27Ae, RPS27A, UBA80; ubiquitin-small subunit ribosomal protein S27Ae; K02977; 	XP_010506742.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-2 [Camelina sativa]
AT2G47340	64.30	52.17	36.96	33.21	AT2G47340	GO:0004857,enzyme inhibitor activity; GO:0030599,pectinesterase activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_182256.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT2G47380	104.53	96.40	157.48	195.77	AT2G47380	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005746,mitochondrial respirasome; GO:0016020,membrane; 	--	NP_001324866.1 Cytochrome c oxidase subunit Vc family protein [Arabidopsis thaliana]
AT2G47610	219.76	209.93	371.89	336.29	AT2G47610	GO:0000325,plant-type vacuole; GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042254,ribosome biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L7Ae, RPL7A; large subunit ribosomal protein L7Ae; K02936; 	NP_182283.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT2G47730	136.37	123.55	75.84	66.82	AT2G47730	GO:0000325,plant-type vacuole; GO:0004364,glutathione transferase activity; GO:0004601,peroxidase activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006952,defense response; GO:0009407,toxin catabolic process; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009636,response to toxic substance; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0016491,oxidoreductase activity; GO:0016740,transferase activity; GO:0042221,response to chemical; GO:0043295,glutathione binding; GO:0071456,cellular response to hypoxia; GO:0098869,cellular oxidant detoxification; GO:1901149,salicylic acid binding; 	GST, gst; glutathione S-transferase [EC:2.5.1.18]; K00799; 	NP_001323480.1 glutathione S-transferase phi 8 [Arabidopsis thaliana]
AT2G47780	1.65	2.55	5.72	11.64	AT2G47780	GO:0005811,lipid droplet; GO:0034389,lipid droplet organization; GO:0045927,positive regulation of growth; GO:0080186,developmental vegetative growth; GO:1902584,positive regulation of response to water deprivation; 	--	NP_182299.1 Rubber elongation factor protein (REF) [Arabidopsis thaliana]
AT2G47890	17.72	18.77	34.87	28.81	AT2G47890	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0007623,circadian rhythm; GO:0008270,zinc ion binding; GO:0009416,response to light stimulus; GO:0009637,response to blue light; GO:0010114,response to red light; GO:0010218,response to far red light; GO:0046872,metal ion binding; 	--	NP_182310.1 B-box type zinc finger protein with CCT domain-containing protein [Arabidopsis thaliana]
AT2G48120	28.60	28.98	12.54	13.82	AT2G48120	GO:0003723,RNA binding; GO:0006397,mRNA processing; GO:0009501,amyloplast; GO:0009507,chloroplast; GO:0009509,chromoplast; GO:0009513,etioplast; GO:0009536,plastid; GO:0009537,proplastid; GO:0009570,chloroplast stroma; GO:0009658,chloroplast organization; GO:0009965,leaf morphogenesis; GO:0010239,chloroplast mRNA processing; GO:0016070,RNA metabolic process; GO:0019843,rRNA binding; GO:0042254,ribosome biogenesis; GO:0042644,chloroplast nucleoid; GO:0043621,protein self-association; GO:0048366,leaf development; GO:0071482,cellular response to light stimulus; 	--	NP_182332.1 pale cress protein (PAC) [Arabidopsis thaliana]
AT2G48150	176.74	109.43	73.02	118.39	AT2G48150	GO:0004601,peroxidase activity; GO:0004602,glutathione peroxidase activity; GO:0005829,cytosol; GO:0006979,response to oxidative stress; GO:0012505,endomembrane system; GO:0016491,oxidoreductase activity; GO:0098869,cellular oxidant detoxification; GO:0110165,cellular anatomical entity; 	gpx, btuE, bsaA; glutathione peroxidase [EC:1.11.1.9]; K00432; 	NP_566128.1 glutathione peroxidase 4 [Arabidopsis thaliana]
AT3G01060	52.41	50.82	29.11	29.81	AT3G01060	GO:0003674,molecular_function; GO:0007623,circadian rhythm; GO:0016874,ligase activity; 	--	NP_566129.1 lysine-tRNA ligase [Arabidopsis thaliana]
AT3G01150	30.78	27.70	43.77	45.59	AT3G01150	GO:0000381,regulation of alternative mRNA splicing, via spliceosome; GO:0000932,P-body; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006397,mRNA processing; GO:0006417,regulation of translation; GO:0008380,RNA splicing; GO:0009845,seed germination; GO:0043484,regulation of RNA splicing; 	--	NP_001319439.1 polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
AT3G01324	3.03	9.17	0.00	0.00	AT3G01324	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001078086.1 ECA1-like gametogenesis related family protein [Arabidopsis thaliana]
AT3G01420	13.18	12.34	29.88	29.82	AT3G01420	GO:0001561,fatty acid alpha-oxidation; GO:0004601,peroxidase activity; GO:0005811,lipid droplet; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0006952,defense response; GO:0006979,response to oxidative stress; GO:0008219,cell death; GO:0009626,plant-type hypersensitive response; GO:0009627,systemic acquired resistance; GO:0009737,response to abscisic acid; GO:0009751,response to salicylic acid; GO:0012511,monolayer-surrounded lipid storage body; GO:0016491,oxidoreductase activity; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0020037,heme binding; GO:0031408,oxylipin biosynthetic process; GO:0034614,cellular response to reactive oxygen species; GO:0042742,defense response to bacterium; GO:0046872,metal ion binding; GO:0050832,defense response to fungus; GO:0051213,dioxygenase activity; GO:0071446,cellular response to salicylic acid stimulus; GO:0071732,cellular response to nitric oxide; GO:0098869,cellular oxidant detoxification; GO:1902609,(R)-2-hydroxy-alpha-linolenic acid biosynthetic process; 	DOX; alpha-dioxygenase [EC:1.14.99.-]; K10529; 	NP_186791.1 Peroxidase superfamily protein [Arabidopsis thaliana]
AT3G01480	54.98	62.12	34.04	34.88	AT3G01480	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0010102,lateral root morphogenesis; GO:0010207,photosystem II assembly; GO:0016853,isomerase activity; GO:0031977,thylakoid lumen; GO:0042549,photosystem II stabilization; 	--	NP_186797.1 cyclophilin 38 [Arabidopsis thaliana]
AT3G01510	16.89	12.76	30.40	26.38	AT3G01510	GO:0004721,phosphoprotein phosphatase activity; GO:0005515,protein binding; GO:0005975,carbohydrate metabolic process; GO:0005983,starch catabolic process; GO:0006073,cellular glucan metabolic process; GO:0006470,protein dephosphorylation; GO:0008138,protein tyrosine/serine/threonine phosphatase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009569,chloroplast starch grain; GO:0009570,chloroplast stroma; GO:0016311,dephosphorylation; GO:0016787,hydrolase activity; GO:0019203,carbohydrate phosphatase activity; GO:0043036,starch grain; GO:0046838,phosphorylated carbohydrate dephosphorylation; 	--	NP_566139.1 like SEX4 1 [Arabidopsis thaliana]
AT3G01530	10.19	12.03	25.54	35.63	AT3G01530	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0043565,sequence-specific DNA binding; GO:0048443,stamen development; GO:0080086,stamen filament development; GO:1990841,promoter-specific chromatin binding; 	--	NP_186802.1 myb domain protein 57 [Arabidopsis thaliana]
AT3G01540	33.38	31.70	62.77	45.95	AT3G01540	GO:0000166,nucleotide binding; GO:0000184,nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	DDX5, DBP2; ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]; K12823; 	NP_001030619.1 DEAD box RNA helicase 1 [Arabidopsis thaliana]
AT3G01550	5.29	4.47	0.29	0.00	AT3G01550	GO:0005794,Golgi apparatus; GO:0008643,carbohydrate transport; GO:0009507,chloroplast; GO:0009536,plastid; GO:0015120,phosphoglycerate transmembrane transporter activity; GO:0015121,phosphoenolpyruvate:phosphate antiporter activity; GO:0015297,antiporter activity; GO:0015605,organophosphate ester transmembrane transporter activity; GO:0015713,phosphoglycerate transmembrane transport; GO:0015714,phosphoenolpyruvate transport; GO:0015748,organophosphate ester transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0031969,chloroplast membrane; GO:0055085,transmembrane transport; GO:0089722,phosphoenolpyruvate transmembrane transport; 	--	NP_566142.1 phosphoenolpyruvate (pep)/phosphate translocator 2 [Arabidopsis thaliana]
AT3G01600	0.43	0.00	10.11	7.49	AT3G01600	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_001319443.1 NAC domain containing protein 44 [Arabidopsis thaliana]
AT3G01920	15.62	11.02	6.38	4.32	AT3G01920	GO:0003725,double-stranded RNA binding; GO:0003729,mRNA binding; GO:0005829,cytosol; GO:0008150,biological_process; 	--	NP_566156.2 DHBP synthase RibB-like alpha/beta domain-containing protein [Arabidopsis thaliana]
AT3G02010	21.94	30.76	3.13	2.10	AT3G02010	GO:0003723,RNA binding; GO:0005515,protein binding; GO:0008270,zinc ion binding; GO:0009451,RNA modification; GO:0043231,intracellular membrane-bounded organelle; 	--	NP_186850.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]
AT3G02030	32.55	27.15	18.21	15.83	AT3G02030	GO:0004144,diacylglycerol O-acyltransferase activity; GO:0005575,cellular_component; GO:0008150,biological_process; GO:0008374,O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0044249,cellular biosynthetic process; GO:1901576,organic substance biosynthetic process; 	--	NP_186852.4 transferase [Arabidopsis thaliana]
AT3G02050	17.60	21.51	8.83	13.18	AT3G02050	GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006813,potassium ion transport; GO:0009932,cell tip growth; GO:0015079,potassium ion transmembrane transporter activity; GO:0016020,membrane; GO:0071805,potassium ion transmembrane transport; 	--	NP_186854.1 K+ uptake transporter 3 [Arabidopsis thaliana]
AT3G02190	163.70	138.66	315.82	353.17	AT3G02190	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L39e, RPL39; large subunit ribosomal protein L39e; K02924; 	NP_566167.1 Ribosomal protein L39 family protein [Arabidopsis thaliana]
AT3G02220	51.38	41.41	100.15	65.33	AT3G02220	GO:0008150,biological_process; 	--	NP_186871.1 small acidic-like protein [Arabidopsis thaliana]
AT3G02480	205.99	191.57	105.96	115.26	AT3G02480	GO:0005829,cytosol; GO:0009414,response to water deprivation; 	--	NP_566173.1 Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]
AT3G02560	195.24	217.72	340.96	360.76	AT3G02560	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0006412,translation; GO:0009507,chloroplast; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0032040,small-subunit processome; GO:0042274,ribosomal small subunit biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-S7e, RPS7; small subunit ribosomal protein S7e; K02993; 	NP_001319452.1 Ribosomal protein S7e family protein [Arabidopsis thaliana]
AT3G02580	39.33	34.70	22.74	22.56	AT3G02580	GO:0000248,C-5 sterol desaturase activity; GO:0005506,iron ion binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0016020,membrane; GO:0016126,sterol biosynthetic process; GO:0016132,brassinosteroid biosynthetic process; GO:0016491,oxidoreductase activity; GO:0050046,delta7-sterol 5(6)-desaturase activity; 	SC5DL, ERG3; Delta7-sterol 5-desaturase [EC:1.14.19.20]; K00227; 	NP_186907.1 sterol 1 [Arabidopsis thaliana]
AT3G02640	223.37	197.51	115.51	117.39	AT3G02640	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_566178.1 transmembrane protein [Arabidopsis thaliana]
AT3G02720	42.36	41.04	22.84	30.11	AT3G02720	GO:0004462,lactoylglutathione lyase activity; GO:0005829,cytosol; GO:0016829,lyase activity; GO:0019172,glyoxalase III activity; GO:0019249,lactate biosynthetic process; GO:0061727,methylglyoxal catabolic process to lactate; 	DJ1D; D-lactate dehydratase [EC:4.2.1.130]; K18881; 	NP_186921.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]
AT3G02910	22.02	32.42	50.26	61.53	AT3G02910	GO:0005829,cytosol; GO:0008150,biological_process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0061929,gamma-glutamylaminecyclotransferase activity; 	GGACT; gamma-glutamylaminecyclotransferase [EC:2.3.2.-]; K19761; 	NP_566187.1 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana]
AT3G03160	81.67	108.11	59.25	48.57	AT3G03160	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006886,intracellular protein transport; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0015031,protein transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016192,vesicle-mediated transport; GO:0070973,protein localization to endoplasmic reticulum exit site; 	--	NP_566195.1 B-cell receptor-associated-like protein [Arabidopsis thaliana]
AT3G03270	55.65	53.99	36.12	23.54	AT3G03270	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0016787,hydrolase activity; GO:0043621,protein self-association; GO:0071456,cellular response to hypoxia; 	--	NP_850506.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]
AT3G03340	22.68	18.74	57.89	66.03	AT3G03340	GO:0003729,mRNA binding; GO:0005685,U1 snRNP; GO:0006376,mRNA splice site selection; GO:0009567,double fertilization forming a zygote and endosperm; GO:0071004,U2-type prespliceosome; 	--	NP_001327217.1 LUC7 related protein [Arabidopsis thaliana]
AT3G03620	25.72	8.40	4.94	8.95	AT3G03620	GO:0015297,antiporter activity; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0042910,xenobiotic transmembrane transporter activity; GO:0055085,transmembrane transport; GO:1990961,xenobiotic detoxification by transmembrane export across the plasma membrane; 	--	NP_001327451.1 MATE efflux family protein [Arabidopsis thaliana]
AT3G03760	28.50	30.39	6.98	16.36	AT3G03760	GO:0005634,nucleus; GO:0009753,response to jasmonic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0045893,positive regulation of DNA-templated transcription; GO:1900150,regulation of defense response to fungus; 	--	NP_187026.1 LOB domain-containing protein 20 [Arabidopsis thaliana]
AT3G03780	248.46	267.59	172.54	165.94	AT3G03780	GO:0003729,mRNA binding; GO:0003871,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0008168,methyltransferase activity; GO:0008172,S-methyltransferase activity; GO:0008270,zinc ion binding; GO:0008652,cellular amino acid biosynthetic process; GO:0008705,methionine synthase activity; GO:0009086,methionine biosynthetic process; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0016740,transferase activity; GO:0032259,methylation; GO:0046872,metal ion binding; GO:0048046,apoplast; 	metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]; K00549; 	NP_001118564.1 methionine synthase 2 [Arabidopsis thaliana]
AT3G03820	6.44	14.16	1.16	0.00	AT3G03820	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0009266,response to temperature stimulus; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0016020,membrane; 	SAUR; SAUR family protein; K14488; 	NP_001319462.1 SAUR-like auxin-responsive protein family [Arabidopsis thaliana]
AT3G03890	49.51	36.90	29.22	25.04	AT3G03890	GO:0009507,chloroplast; GO:0020037,heme binding; GO:0042167,heme catabolic process; GO:0042803,protein homodimerization activity; 	--	NP_566216.1 FMN binding protein [Arabidopsis thaliana]
AT3G03920	219.29	224.52	330.24	373.26	AT3G03920	GO:0000454,snoRNA guided rRNA pseudouridine synthesis; GO:0001522,pseudouridine synthesis; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009535,chloroplast thylakoid membrane; GO:0031429,box H/ACA snoRNP complex; GO:0034513,box H/ACA snoRNA binding; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	GAR1, NOLA1; H/ACA ribonucleoprotein complex subunit 1; K11128; 	NP_566217.1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein [Arabidopsis thaliana]
AT3G04020	2.30	2.81	12.13	8.51	AT3G04020	GO:0003674,molecular_function; 	--	NP_001326032.1 hypothetical protein AT3G04020 [Arabidopsis thaliana]
AT3G04400	2389.98	2222.58	3623.37	3856.11	AT3G04400	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005576,extracellular region; GO:0005730,nucleolus; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0070180,large ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L23e, RPL23; large subunit ribosomal protein L23e; K02894; 	NP_180895.1 Ribosomal protein L14p/L23e family protein [Arabidopsis thaliana]
AT3G04600	27.62	39.70	73.44	67.95	AT3G04600	GO:0000166,nucleotide binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004830,tryptophan-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006436,tryptophanyl-tRNA aminoacylation; GO:0009791,post-embryonic development; GO:0016740,transferase activity; GO:0016874,ligase activity; GO:0048608,reproductive structure development; 	WARS, trpS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]; K01867; 	NP_001078104.1 Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]
AT3G04620	50.17	54.10	23.18	25.42	AT3G04620	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0048235,pollen sperm cell differentiation; 	--	NP_187113.1 Alba DNA/RNA-binding protein [Arabidopsis thaliana]
AT3G04750	4.84	9.08	1.87	3.71	AT3G04750	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005739,mitochondrion; GO:0008150,biological_process; 	--	NP_187126.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT3G04890	22.37	17.57	11.05	7.69	AT3G04890	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016757,glycosyltransferase activity; 	--	NP_566242.1 adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana]
AT3G05020	153.93	139.95	97.81	72.30	AT3G05020	GO:0000036,acyl carrier activity; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; 	--	NP_187153.1 acyl carrier protein 1 [Arabidopsis thaliana]
AT3G05060	70.05	75.55	141.55	134.31	AT3G05060	GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030515,snoRNA binding; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; 	NOP58; nucleolar protein 58; K14565; 	NP_187157.1 NOP56-like pre RNA processing ribonucleoprotein [Arabidopsis thaliana]
AT3G05165	17.01	19.97	30.63	27.92	AT3G05165	GO:0008643,carbohydrate transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_001154590.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT3G05480	44.16	51.73	67.78	81.46	AT3G05480	GO:0000076,DNA replication checkpoint signaling; GO:0000077,DNA damage checkpoint signaling; GO:0003674,molecular_function; GO:0005634,nucleus; GO:0006281,DNA repair; GO:0006282,regulation of DNA repair; GO:0030896,checkpoint clamp complex; GO:0031573,mitotic intra-S DNA damage checkpoint signaling; GO:0071479,cellular response to ionizing radiation; 	RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]; K10994; 	NP_001319478.1 cell cycle checkpoint control protein family [Arabidopsis thaliana]
AT3G05520	109.93	97.87	41.02	65.04	AT3G05520	GO:0003779,actin binding; GO:0005634,nucleus; GO:0007015,actin filament organization; GO:0008290,F-actin capping protein complex; GO:0030036,actin cytoskeleton organization; GO:0051015,actin filament binding; GO:0051016,barbed-end actin filament capping; GO:0051693,actin filament capping; 	CAPZA; capping protein (actin filament) muscle Z-line, alpha; K10364; 	NP_001326001.1 Subunits of heterodimeric actin filament capping protein Capz superfamily [Arabidopsis thaliana]
AT3G05560	268.65	263.00	571.41	470.83	AT3G05560	GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L22e, RPL22; large subunit ribosomal protein L22e; K02891; 	NP_001078112.1 Ribosomal L22e protein family [Arabidopsis thaliana]
AT3G05800	16.21	18.62	35.55	41.61	AT3G05800	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009742,brassinosteroid mediated signaling pathway; GO:0046983,protein dimerization activity; 	--	NP_566260.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 [Arabidopsis thaliana]
AT3G05810	98.83	84.32	165.24	148.44	AT3G05810	--	--	NP_001327733.1 IGR motif protein [Arabidopsis thaliana]
AT3G05960	46.89	41.23	23.91	20.78	AT3G05960	GO:0008643,carbohydrate transport; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0055085,transmembrane transport; 	--	NP_187247.1 sugar transporter 6 [Arabidopsis thaliana]
AT3G06050	75.62	66.42	36.16	59.68	AT3G06050	GO:0004601,peroxidase activity; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0006979,response to oxidative stress; GO:0008379,thioredoxin peroxidase activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0034599,cellular response to oxidative stress; GO:0042744,hydrogen peroxide catabolic process; GO:0045454,cell redox homeostasis; GO:0098869,cellular oxidant detoxification; 	--	NP_566268.1 peroxiredoxin IIF [Arabidopsis thaliana]
AT3G06170	110.29	118.70	212.89	221.14	AT3G06170	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_187268.2 Serinc-domain containing serine and sphingolipid biosynthesis protein [Arabidopsis thaliana]
AT3G06190	61.77	77.56	41.13	46.12	AT3G06190	GO:0005515,protein binding; GO:0005634,nucleus; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0016567,protein ubiquitination; GO:0042631,cellular response to water deprivation; GO:0071472,cellular response to salt stress; GO:0110165,cellular anatomical entity; 	SPOP; speckle-type POZ protein; K10523; 	NP_566275.1 BTB-POZ and MATH domain 2 [Arabidopsis thaliana]
AT3G06210	4.00	2.20	8.64	6.06	AT3G06210	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_187272.3 ARM repeat superfamily protein [Arabidopsis thaliana]
AT3G06490	15.19	9.27	4.86	4.91	AT3G06490	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006952,defense response; GO:0008219,cell death; GO:0009620,response to fungus; GO:0043565,sequence-specific DNA binding; GO:0120195,positive regulation of anther dehiscence; 	--	NP_187301.1 myb domain protein 108 [Arabidopsis thaliana]
AT3G06530	15.26	14.33	31.92	29.88	AT3G06530	GO:0000325,plant-type vacuole; GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009507,chloroplast; GO:0030515,snoRNA binding; GO:0030686,90S preribosome; GO:0032040,small-subunit processome; GO:0034455,t-UTP complex; GO:0042254,ribosome biogenesis; GO:0045943,positive regulation of transcription by RNA polymerase I; GO:1990904,ribonucleoprotein complex; 	UTP10, HEATR1; U3 small nucleolar RNA-associated protein 10; K14550; 	NP_001189828.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT3G06680	125.51	135.91	250.41	239.29	AT3G06680	GO:0002181,cytoplasmic translation; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L29e, RPL29; large subunit ribosomal protein L29e; K02905; 	NP_001118594.1 Ribosomal L29e protein family [Arabidopsis thaliana]
AT3G06700	207.84	256.12	448.12	503.78	AT3G06700	GO:0002181,cytoplasmic translation; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L29e, RPL29; large subunit ribosomal protein L29e; K02905; 	NP_001030650.1 Ribosomal L29e protein family [Arabidopsis thaliana]
AT3G06730	54.33	47.58	27.51	23.58	AT3G06730	GO:0005515,protein binding; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009657,plastid organization; GO:0015035,protein-disulfide reductase activity; GO:0015036,disulfide oxidoreductase activity; GO:0016491,oxidoreductase activity; GO:0042644,chloroplast nucleoid; GO:0045454,cell redox homeostasis; GO:0047134,protein-disulfide reductase (NAD(P)) activity; 	--	NP_187329.1 Thioredoxin z [Arabidopsis thaliana]
AT3G06790	21.88	21.26	50.23	32.29	AT3G06790	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0006397,mRNA processing; GO:0006807,nitrogen compound metabolic process; GO:0016554,cytidine to uridine editing; GO:0043170,macromolecule metabolic process; GO:0046983,protein dimerization activity; GO:0050897,cobalt ion binding; GO:0080156,mitochondrial mRNA modification; GO:1900864,mitochondrial RNA modification; 	--	NP_974243.1 plastid developmental protein DAG [Arabidopsis thaliana]
AT3G07050	44.88	45.64	73.32	80.12	AT3G07050	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0009506,plasmodesma; GO:0010077,maintenance of inflorescence meristem identity; GO:0045604,regulation of epidermal cell differentiation; GO:0045892,negative regulation of DNA-templated transcription; GO:0045995,regulation of embryonic development; GO:0048444,floral organ morphogenesis; GO:0048825,cotyledon development; GO:2000024,regulation of leaf development; 	NUG1, GNL3; nuclear GTP-binding protein; K14538; 	NP_187361.1 GTP-binding family protein [Arabidopsis thaliana]
AT3G07110	421.27	425.46	633.80	663.23	AT3G07110	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0015934,large ribosomal subunit; GO:0017148,negative regulation of translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L13Ae, RPL13A; large subunit ribosomal protein L13Ae; K02872; 	NP_187367.1 Ribosomal protein L13 family protein [Arabidopsis thaliana]
AT3G07170	29.68	21.49	40.74	49.78	AT3G07170	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; 	--	NP_566300.1 Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]
AT3G07200	40.54	45.97	27.04	15.80	AT3G07200	GO:0003674,molecular_function; GO:0005730,nucleolus; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0008150,biological_process; GO:0032183,SUMO binding; GO:0046872,metal ion binding; 	--	NP_001078119.1 RING/U-box superfamily protein [Arabidopsis thaliana]
AT3G07230	1311.03	1203.52	2338.20	2609.03	AT3G07230	GO:0005829,cytosol; 	--	NP_187379.1 wound-responsive protein-like protein [Arabidopsis thaliana]
AT3G07370	7.00	6.77	12.50	19.70	AT3G07370	GO:0000209,protein polyubiquitination; GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006515,protein quality control for misfolded or incompletely synthesized proteins; GO:0009266,response to temperature stimulus; GO:0009651,response to salt stress; GO:0009737,response to abscisic acid; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0045862,positive regulation of proteolysis; GO:0051087,chaperone binding; GO:0061630,ubiquitin protein ligase activity; GO:0071218,cellular response to misfolded protein; 	STUB1, CHIP; STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]; K09561; 	NP_566305.1 carboxyl terminus of HSC70-interacting protein [Arabidopsis thaliana]
AT3G07390	271.34	268.47	153.12	141.97	AT3G07390	--	--	NP_566306.3 auxin-induced in root cultures-like protein [Arabidopsis thaliana]
AT3G07430	41.56	36.84	66.14	93.09	AT3G07430	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010020,chloroplast fission; GO:0016020,membrane; GO:0042651,thylakoid membrane; GO:0090143,nucleoid organization; 	--	NP_566307.1 YGGT family protein [Arabidopsis thaliana]
AT3G07590	43.19	70.49	88.60	112.69	AT3G07590	GO:0000243,commitment complex; GO:0000325,plant-type vacuole; GO:0000387,spliceosomal snRNP assembly; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005682,U5 snRNP; GO:0005685,U1 snRNP; GO:0005686,U2 snRNP; GO:0005687,U4 snRNP; GO:0005689,U12-type spliceosomal complex; GO:0005730,nucleolus; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0016607,nuclear speck; GO:0034715,pICln-Sm protein complex; GO:0034719,SMN-Sm protein complex; GO:0035194,post-transcriptional gene silencing by RNA; GO:0043229,intracellular organelle; GO:0071011,precatalytic spliceosome; GO:0071013,catalytic step 2 spliceosome; GO:0097526,spliceosomal tri-snRNP complex; GO:1990904,ribonucleoprotein complex; 	SNRPD1, SMD1; small nuclear ribonucleoprotein D1; K11087; 	NP_001189837.1 Small nuclear ribonucleoprotein family protein [Arabidopsis thaliana]
AT3G07750	85.44	77.46	149.72	138.56	AT3G07750	GO:0000176,nuclear exosome (RNase complex); GO:0000177,cytoplasmic exosome (RNase complex); GO:0000467,exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0016075,rRNA catabolic process; GO:0034427,nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'; GO:0034473,U1 snRNA 3'-end processing; GO:0034475,U4 snRNA 3'-end processing; GO:0034476,U5 snRNA 3'-end processing; GO:0043928,exonucleolytic catabolism of deadenylated mRNA; GO:0071028,nuclear mRNA surveillance; GO:0071035,nuclear polyadenylation-dependent rRNA catabolic process; GO:0071038,nuclear polyadenylation-dependent tRNA catabolic process; GO:0071042,nuclear polyadenylation-dependent mRNA catabolic process; 	RRP42, EXOSC7; exosome complex component RRP42; K12589; 	NP_001319497.1 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
AT3G07760	29.50	29.09	56.24	47.40	AT3G07760	GO:0005515,protein binding; GO:0008150,biological_process; 	--	NP_001327338.1 Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]
AT3G07850	143.73	150.45	91.76	91.64	AT3G07850	GO:0004650,polygalacturonase activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0047911,galacturan 1,4-alpha-galacturonidase activity; GO:0071555,cell wall organization; 	E3.2.1.67; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]; K01213; 	NP_187442.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT3G07860	8.72	5.02	16.15	21.54	AT3G07860	GO:0000398,mRNA splicing, via spliceosome; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005689,U12-type spliceosomal complex; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:1990904,ribonucleoprotein complex; 	--	NP_001325551.1 Ubiquitin-like superfamily protein [Arabidopsis thaliana]
AT3G08520	219.27	274.01	428.30	439.37	AT3G08520	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	RP-L41e, RPL41; large subunit ribosomal protein L41e; K02928; 	--
AT3G08630	20.67	19.94	13.89	5.53	AT3G08630	GO:0009507,chloroplast; GO:0009536,plastid; GO:0016020,membrane; GO:0031969,chloroplast membrane; 	--	NP_187475.1 alphavirus core family protein (DUF3411) [Arabidopsis thaliana]
AT3G08860	9.85	9.76	26.98	27.51	AT3G08860	GO:0003824,catalytic activity; GO:0005739,mitochondrion; GO:0008453,alanine-glyoxylate transaminase activity; GO:0008483,transaminase activity; GO:0009853,photorespiration; GO:0016740,transferase activity; GO:0030170,pyridoxal phosphate binding; GO:0043562,cellular response to nitrogen levels; 	AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]; K00827; 	NP_187498.1 PYRIMIDINE 4 [Arabidopsis thaliana]
AT3G08970	10.22	9.44	4.71	4.04	AT3G08970	GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0009408,response to heat; GO:0009506,plasmodesma; GO:0009860,pollen tube growth; GO:0016491,oxidoreductase activity; GO:0034605,cellular response to heat; 	--	NP_001319504.1 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]
AT3G09440	304.34	302.27	172.01	187.76	AT3G09440	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0002020,protease binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0006950,response to stress; GO:0009408,response to heat; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009615,response to virus; GO:0016363,nuclear matrix; GO:0016887,ATP hydrolysis activity; GO:0022626,cytosolic ribosome; GO:0031072,heat shock protein binding; GO:0034620,cellular response to unfolded protein; GO:0042026,protein refolding; GO:0044183,protein folding chaperone; GO:0048046,apoplast; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051787,misfolded protein binding; GO:0140662,ATP-dependent protein folding chaperone; 	HSPA1s; heat shock 70kDa protein 1/2/6/8; K03283; 	NP_001189847.1 Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]
AT3G09550	4.67	6.24	1.45	1.87	AT3G09550	GO:0005515,protein binding; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_001319511.1 Ankyrin repeat family protein [Arabidopsis thaliana]
AT3G09630	439.03	415.47	796.22	758.55	AT3G09630	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L4e, RPL4; large subunit ribosomal protein L4e; K02930; 	NP_187574.1 Ribosomal protein L4/L1 family [Arabidopsis thaliana]
AT3G09720	9.37	8.87	19.09	22.68	AT3G09720	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0030490,maturation of SSU-rRNA; 	--	NP_001326599.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT3G09980	150.96	162.08	664.21	274.67	AT3G09980	GO:0002218,activation of innate immune response; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0008017,microtubule binding; GO:1900426,positive regulation of defense response to bacterium; 	--	NP_187609.2 ankyrin repeat 30A-like protein (DUF662) [Arabidopsis thaliana]
AT3G10190	48.72	48.64	29.46	30.99	AT3G10190	GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0046872,metal ion binding; GO:0050832,defense response to fungus; 	CML; calcium-binding protein CML; K13448; 	NP_187630.1 Calcium-binding EF-hand family protein [Arabidopsis thaliana]
AT3G10250	17.69	11.32	30.00	21.98	AT3G10250	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0016874,ligase activity; 	--	NP_001327816.1 histidine-tRNA ligase [Arabidopsis thaliana]
AT3G10340	33.09	44.98	21.77	22.06	AT3G10340	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006559,L-phenylalanine catabolic process; GO:0009698,phenylpropanoid metabolic process; GO:0009800,cinnamic acid biosynthetic process; GO:0016829,lyase activity; GO:0016841,ammonia-lyase activity; GO:0045548,phenylalanine ammonia-lyase activity; 	PAL; phenylalanine ammonia-lyase [EC:4.3.1.24]; K10775; 	NP_187645.1 phenylalanine ammonia-lyase 4 [Arabidopsis thaliana]
AT3G10450	5.42	5.19	13.09	14.89	AT3G10450	GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0016787,hydrolase activity; GO:0019748,secondary metabolic process; 	--	NP_001325521.1 serine carboxypeptidase-like 7 [Arabidopsis thaliana]
AT3G10530	16.00	20.30	32.47	30.97	AT3G10530	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0032040,small-subunit processome; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_187664.2 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT3G10550	8.17	7.96	3.74	3.61	AT3G10550	GO:0004438,phosphatidylinositol-3-phosphatase activity; GO:0004721,phosphoprotein phosphatase activity; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0006629,lipid metabolic process; GO:0010008,endosome membrane; GO:0016020,membrane; GO:0016311,dephosphorylation; GO:0016787,hydrolase activity; GO:0016791,phosphatase activity; GO:0031410,cytoplasmic vesicle; GO:0035556,intracellular signal transduction; GO:0042631,cellular response to water deprivation; GO:0046856,phosphatidylinositol dephosphorylation; GO:0052629,phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; GO:2000070,regulation of response to water deprivation; 	MTMR1_2; myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]; K18081; 	NP_187666.5 Myotubularin-like phosphatases II superfamily [Arabidopsis thaliana]
AT3G10590	3.02	2.90	0.00	0.00	AT3G10590	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0006355,regulation of DNA-templated transcription; 	--	NP_187670.1 Duplicated homeodomain-like superfamily protein [Arabidopsis thaliana]
AT3G11120	1114.38	1016.82	1799.72	1562.84	AT3G11120	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	RP-L41e, RPL41; large subunit ribosomal protein L41e; K02928; 	--
AT3G11450	25.67	24.37	47.74	44.41	AT3G11450	GO:0003677,DNA binding; GO:0005829,cytosol; GO:0006450,regulation of translational fidelity; GO:0009793,embryo development ending in seed dormancy; GO:0009909,regulation of flower development; GO:0030544,Hsp70 protein binding; GO:0043022,ribosome binding; GO:0048366,leaf development; GO:0051083,'de novo' cotranslational protein folding; GO:1902182,shoot apical meristem development; 	--	NP_187752.2 DnaJ and Myb-like DNA-binding domain-containing protein [Arabidopsis thaliana]
AT3G11630	807.00	715.29	489.11	542.13	AT3G11630	GO:0004601,peroxidase activity; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0045454,cell redox homeostasis; GO:0048046,apoplast; GO:0051920,peroxiredoxin activity; GO:0098869,cellular oxidant detoxification; GO:0140824,thioredoxin-dependent peroxiredoxin activity; GO:1901149,salicylic acid binding; 	PRDX2_4, ahpC; peroxiredoxin 2/4 [EC:1.11.1.24]; K03386; 	NP_187769.1 Thioredoxin superfamily protein [Arabidopsis thaliana]
AT3G11680	3.82	2.97	0.46	0.59	AT3G11680	GO:0003674,molecular_function; GO:0006811,ion transport; GO:0009705,plant-type vacuole membrane; GO:0015743,malate transport; GO:0016020,membrane; GO:0098656,anion transmembrane transport; 	--	NP_001327288.1 aluminum activated malate transporter family protein [Arabidopsis thaliana]
AT3G11710	124.31	126.49	222.45	188.88	AT3G11710	GO:0000049,tRNA binding; GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004824,lysine-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006430,lysyl-tRNA aminoacylation; GO:0009506,plasmodesma; GO:0016874,ligase activity; GO:0046872,metal ion binding; 	KARS, lysS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]; K04567; 	NP_187777.1 lysyl-tRNA synthetase 1 [Arabidopsis thaliana]
AT3G11780	81.27	80.35	57.55	43.72	AT3G11780	GO:0000325,plant-type vacuole; GO:0015918,sterol transport; GO:0032366,intracellular sterol transport; GO:0032934,sterol binding; GO:0099503,secretory vesicle; 	--	NP_566400.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana]
AT3G11900	10.82	11.30	6.23	3.67	AT3G11900	GO:0003333,amino acid transmembrane transport; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006865,amino acid transport; GO:0009624,response to nematode; GO:0015173,aromatic amino acid transmembrane transporter activity; GO:0015175,neutral amino acid transmembrane transporter activity; GO:0015179,L-amino acid transmembrane transporter activity; GO:0015801,aromatic amino acid transport; GO:0015804,neutral amino acid transport; GO:0015807,L-amino acid transport; GO:0016020,membrane; GO:1902475,L-alpha-amino acid transmembrane transport; 	SLC36A, PAT; solute carrier family 36 (proton-coupled amino acid transporter); K14209; 	NP_001327533.1 aromatic and neutral transporter 1 [Arabidopsis thaliana]
AT3G11964	18.23	17.14	32.17	35.79	AT3G11964	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005886,plasma membrane; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0009553,embryo sac development; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	--	NP_001326789.1 RIBOSOMAL RNA PROCESSING 5 [Arabidopsis thaliana]
AT3G12050	66.63	65.86	46.11	42.46	AT3G12050	GO:0001671,ATPase activator activity; GO:0005829,cytosol; GO:0006457,protein folding; GO:0032781,positive regulation of ATP-dependent activity; GO:0051087,chaperone binding; GO:0051879,Hsp90 protein binding; 	--	NP_566410.1 Aha1 domain-containing protein [Arabidopsis thaliana]
AT3G12080	14.47	15.25	20.84	24.61	AT3G12080	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0005525,GTP binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009793,embryo development ending in seed dormancy; GO:0042254,ribosome biogenesis; GO:0042793,plastid transcription; 	--	NP_187815.2 GTP-binding family protein [Arabidopsis thaliana]
AT3G12270	9.86	13.55	17.38	21.38	AT3G12270	GO:0000976,transcription cis-regulatory region binding; GO:0005737,cytoplasm; GO:0008168,methyltransferase activity; GO:0016274,protein-arginine N-methyltransferase activity; GO:0016740,transferase activity; GO:0018216,peptidyl-arginine methylation; GO:0032259,methylation; GO:0046872,metal ion binding; 	--	NP_187835.2 protein arginine methyltransferase 3 [Arabidopsis thaliana]
AT3G12410	13.19	5.20	24.35	22.54	AT3G12410	GO:0003676,nucleic acid binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0008408,3'-5' exonuclease activity; GO:0016740,transferase activity; GO:0090305,nucleic acid phosphodiester bond hydrolysis; 	--	NP_187847.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana]
AT3G12580	8.64	10.15	2.59	3.11	AT3G12580	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009505,plant-type cell wall; GO:0009615,response to virus; GO:0009617,response to bacterium; GO:0016567,protein ubiquitination; GO:0016887,ATP hydrolysis activity; GO:0031072,heat shock protein binding; GO:0031625,ubiquitin protein ligase binding; GO:0034620,cellular response to unfolded protein; GO:0042026,protein refolding; GO:0044183,protein folding chaperone; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051787,misfolded protein binding; GO:0140662,ATP-dependent protein folding chaperone; 	HSPA1s; heat shock 70kDa protein 1/2/6/8; K03283; 	NP_187864.1 heat shock protein 70 [Arabidopsis thaliana]
AT3G12630	105.26	71.44	121.57	158.97	AT3G12630	GO:0003677,DNA binding; GO:0004842,ubiquitin-protein transferase activity; GO:0005634,nucleus; GO:0006970,response to osmotic stress; GO:0008270,zinc ion binding; GO:0009414,response to water deprivation; GO:0016567,protein ubiquitination; GO:0046872,metal ion binding; GO:0051865,protein autoubiquitination; 	--	NP_566429.1 A20/AN1-like zinc finger family protein [Arabidopsis thaliana]
AT3G12670	26.52	30.16	49.59	56.42	AT3G12670	GO:0000166,nucleotide binding; GO:0003883,CTP synthase activity; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0006221,pyrimidine nucleotide biosynthetic process; GO:0006241,CTP biosynthetic process; GO:0006541,glutamine metabolic process; GO:0009733,response to auxin; GO:0009793,embryo development ending in seed dormancy; GO:0016874,ligase activity; GO:0019856,pyrimidine nucleobase biosynthetic process; GO:0042802,identical protein binding; GO:0044210,'de novo' CTP biosynthetic process; 	pyrG, CTPS; CTP synthase [EC:6.3.4.2]; K01937; 	CAA0382192.1 unnamed protein product [Arabidopsis thaliana]
AT3G12720	277.14	402.98	944.42	725.37	AT3G12720	GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0006355,regulation of DNA-templated transcription; 	--	NP_566434.1 myb domain protein 67 [Arabidopsis thaliana]
AT3G12810	3.49	3.80	12.04	5.35	AT3G12810	GO:0000166,nucleotide binding; GO:0000812,Swr1 complex; GO:0003677,DNA binding; GO:0004386,helicase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0009505,plant-type cell wall; GO:0009908,flower development; GO:0016514,SWI/SNF complex; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0030154,cell differentiation; GO:0042393,histone binding; GO:0046686,response to cadmium ion; GO:0140658,ATP-dependent chromatin remodeler activity; 	--	NP_187887.3 SNF2 domain-containing protein / helicase domain-containing protein [Arabidopsis thaliana]
AT3G12860	8.59	6.87	18.00	25.45	AT3G12860	GO:0005634,nucleus; GO:0005730,nucleolus; GO:0008150,biological_process; GO:0030515,snoRNA binding; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	NOP56; nucleolar protein 56; K14564; 	NP_187892.2 NOP56-like pre RNA processing ribonucleoprotein [Arabidopsis thaliana]
AT3G13080	12.61	13.92	34.53	38.27	AT3G13080	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0005524,ATP binding; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0008559,ABC-type xenobiotic transporter activity; GO:0009506,plasmodesma; GO:0010290,chlorophyll catabolite transmembrane transporter activity; GO:0015431,ABC-type glutathione S-conjugate transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0042908,xenobiotic transport; GO:0048046,apoplast; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; 	--	NP_187915.1 multidrug resistance-associated protein 3 [Arabidopsis thaliana]
AT3G13229	0.81	1.18	9.70	2.99	AT3G13229	GO:0008150,biological_process; 	--	NP_683561.1 kinesin-like protein (DUF868) [Arabidopsis thaliana]
AT3G13230	44.47	53.65	91.65	97.74	AT3G13230	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005730,nucleolus; GO:0008150,biological_process; 	--	NP_001326485.1 RNA-binding KH domain-containing protein [Arabidopsis thaliana]
AT3G13580	48.13	58.51	92.28	88.53	AT3G13580	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L7e, RPL7; large subunit ribosomal protein L7e; K02937; 	NP_001326486.1 Ribosomal protein L30/L7 family protein [Arabidopsis thaliana]
AT3G13610	9.71	8.54	2.80	2.80	AT3G13610	GO:0009699,phenylpropanoid biosynthetic process; GO:0009805,coumarin biosynthetic process; GO:0010421,hydrogen peroxide-mediated programmed cell death; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:1990641,response to iron ion starvation; 	F6H; feruloyl-CoA 6-hydroxylase [EC:1.14.11.61]; K06892; 	NP_187970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]
AT3G13940	13.40	15.11	31.23	27.09	AT3G13940	GO:0000428,DNA-directed RNA polymerase complex; GO:0001188,RNA polymerase I preinitiation complex assembly; GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0006362,transcription elongation by RNA polymerase I; 	RPA49, POLR1E; DNA-directed RNA polymerase I subunit RPA49; K03005; 	NP_188010.1 DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana]
AT3G14040	92.63	92.38	57.50	59.33	AT3G14040	GO:0004650,polygalacturonase activity; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016829,lyase activity; 	E3.2.1.67; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]; K01213; 	NP_188020.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT3G14210	106.51	131.26	537.23	490.48	AT3G14210	GO:0000325,plant-type vacuole; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009625,response to insect; GO:0009941,chloroplast envelope; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0019762,glucosinolate catabolic process; GO:0022626,cytosolic ribosome; GO:0048046,apoplast; GO:0099503,secretory vesicle; 	--	NP_188037.1 GDSL-like lipase/acylhydrolase superfamily protein [Arabidopsis thaliana]
AT3G14390	62.16	51.15	93.93	96.60	AT3G14390	GO:0003824,catalytic activity; GO:0005829,cytosol; GO:0008652,cellular amino acid biosynthetic process; GO:0008836,diaminopimelate decarboxylase activity; GO:0009085,lysine biosynthetic process; GO:0009089,lysine biosynthetic process via diaminopimelate; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016829,lyase activity; GO:0016831,carboxy-lyase activity; 	lysA; diaminopimelate decarboxylase [EC:4.1.1.20]; K01586; 	NP_188056.1 Pyridoxal-dependent decarboxylase family protein [Arabidopsis thaliana]
AT3G14395	24.66	13.55	45.88	62.79	AT3G14395	GO:0002213,defense response to insect; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009863,salicylic acid mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0012505,endomembrane system; GO:0015979,photosynthesis; GO:0045454,cell redox homeostasis; GO:0080027,response to herbivore; GO:1900367,positive regulation of defense response to insect; 	--	NP_566485.1 hypothetical protein AT3G14395 [Arabidopsis thaliana]
AT3G14430	215.02	214.03	426.56	371.84	AT3G14430	GO:0006979,response to oxidative stress; GO:0016020,membrane; 	--	NP_566488.1 GRIP/coiled-coil protein [Arabidopsis thaliana]
AT3G14600	154.01	89.19	360.70	315.06	AT3G14600	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L18Ae, RPL18A; large subunit ribosomal protein L18Ae; K02882; 	NP_188078.1 Ribosomal protein L18ae/LX family protein [Arabidopsis thaliana]
AT3G14990	136.12	135.63	80.71	75.80	AT3G14990	GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0019172,glyoxalase III activity; GO:0019249,lactate biosynthetic process; GO:0061727,methylglyoxal catabolic process to lactate; GO:1900409,positive regulation of cellular response to oxidative stress; GO:1903189,glyoxal metabolic process; 	--	NP_188117.1 Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]
AT3G15357	8.14	2.38	20.31	30.13	AT3G15357	GO:0003674,molecular_function; 	--	NP_566510.1 phosphopantothenoylcysteine decarboxylase subunit [Arabidopsis thaliana]
AT3G15400	856.25	886.14	342.57	376.94	AT3G15400	GO:0008150,biological_process; GO:0009505,plant-type cell wall; 	--	NP_188159.1 anther 20 [Arabidopsis thaliana]
AT3G15460	14.33	15.21	28.12	27.46	AT3G15460	GO:0000027,ribosomal large subunit assembly; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0019843,rRNA binding; GO:0042254,ribosome biogenesis; 	--	NP_566514.1 Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
AT3G15470	6.54	4.47	2.04	3.11	AT3G15470	GO:0003674,molecular_function; GO:0005515,protein binding; 	--	NP_566515.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT3G15500	19.40	21.05	35.73	35.92	AT3G15500	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009414,response to water deprivation; GO:0009867,jasmonic acid mediated signaling pathway; 	--	NP_188169.1 NAC domain containing protein 3 [Arabidopsis thaliana]
AT3G15510	21.82	22.81	11.40	5.55	AT3G15510	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009753,response to jasmonic acid; GO:0045995,regulation of embryonic development; GO:0048317,seed morphogenesis; GO:0048731,system development; GO:0080060,integument development; 	--	NP_188170.1 NAC domain containing protein 2 [Arabidopsis thaliana]
AT3G15730	590.68	546.87	332.18	414.73	AT3G15730	GO:0003824,catalytic activity; GO:0004620,phospholipase activity; GO:0004630,phospholipase D activity; GO:0005096,GTPase activator activity; GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0005546,phosphatidylinositol-4,5-bisphosphate binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0009395,phospholipid catabolic process; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:0009845,seed germination; GO:0009873,ethylene-activated signaling pathway; GO:0010119,regulation of stomatal movement; GO:0010358,leaf shaping; GO:0016020,membrane; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0030136,clathrin-coated vesicle; GO:0031410,cytoplasmic vesicle; GO:0031966,mitochondrial membrane; GO:0043231,intracellular membrane-bounded organelle; GO:0046470,phosphatidylcholine metabolic process; GO:0046872,metal ion binding; GO:0050790,regulation of catalytic activity; GO:0070290,N-acylphosphatidylethanolamine-specific phospholipase D activity; 	PLD1_2; phospholipase D1/2 [EC:3.1.4.4]; K01115; 	NP_188194.1 phospholipase D alpha 1 [Arabidopsis thaliana]
AT3G15990	5.97	8.53	3.27	1.33	AT3G15990	GO:0005886,plasma membrane; GO:0006817,phosphate ion transport; GO:0008271,secondary active sulfate transmembrane transporter activity; GO:0008272,sulfate transport; GO:0009506,plasmodesma; GO:0015293,symporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:1902358,sulfate transmembrane transport; 	--	NP_188220.1 sulfate transporter 3;4 [Arabidopsis thaliana]
AT3G16080	135.51	112.53	229.01	217.46	AT3G16080	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-L37e, RPL37; large subunit ribosomal protein L37e; K02922; 	NP_001327284.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT3G16150	35.45	41.07	14.15	9.76	AT3G16150	GO:0004067,asparaginase activity; GO:0005737,cytoplasm; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008798,beta-aspartyl-peptidase activity; GO:0016540,protein autoprocessing; GO:0016787,hydrolase activity; 	ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]; K13051; 	NP_566536.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [Arabidopsis thaliana]
AT3G16190	40.44	37.04	75.94	63.86	AT3G16190	GO:0005829,cytosol; 	--	NP_566539.1 Isochorismatase family protein [Arabidopsis thaliana]
AT3G16240	814.26	769.78	331.17	336.45	AT3G16240	GO:0000325,plant-type vacuole; GO:0000326,protein storage vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006833,water transport; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009705,plant-type vacuole membrane; GO:0009941,chloroplast envelope; GO:0015200,methylammonium transmembrane transporter activity; GO:0015250,water channel activity; GO:0015267,channel activity; GO:0016020,membrane; GO:0042802,identical protein binding; GO:0042807,central vacuole; GO:0055085,transmembrane transport; GO:0072489,methylammonium transmembrane transport; 	--	NP_188245.1 delta tonoplast integral protein [Arabidopsis thaliana]
AT3G16250	32.00	37.27	55.97	57.84	AT3G16250	GO:0005829,cytosol; GO:0009055,electron transfer activity; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009773,photosynthetic electron transport in photosystem I; GO:0010598,NAD(P)H dehydrogenase complex (plastoquinone); GO:0016020,membrane; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0140647,P450-containing electron transport chain; 	--	NP_188246.1 NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
AT3G16290	22.97	21.04	15.39	13.85	AT3G16290	GO:0000166,nucleotide binding; GO:0004176,ATP-dependent peptidase activity; GO:0004222,metalloendopeptidase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0016464,chloroplast protein-transporting ATPase activity; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0031969,chloroplast membrane; GO:0043231,intracellular membrane-bounded organelle; GO:0045037,protein import into chloroplast stroma; GO:0062091,Ycf2/FtsHi complex; 	--	NP_566541.1 AAA-type ATPase family protein [Arabidopsis thaliana]
AT3G16450	1.04	3.99	0.00	0.00	AT3G16450	GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0010043,response to zinc ion; GO:0030246,carbohydrate binding; 	--	NP_001030711.1 Mannose-binding lectin superfamily protein [Arabidopsis thaliana]
AT3G16460	2.54	3.65	0.48	0.61	AT3G16460	GO:0005507,copper ion binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0009506,plasmodesma; GO:0030246,carbohydrate binding; 	--	NP_188267.1 Mannose-binding lectin superfamily protein [Arabidopsis thaliana]
AT3G16780	87.39	107.91	201.93	176.97	AT3G16780	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L19e, RPL19; large subunit ribosomal protein L19e; K02885; 	NP_188300.1 Ribosomal protein L19e family protein [Arabidopsis thaliana]
AT3G16810	33.94	29.41	68.16	59.91	AT3G16810	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006417,regulation of translation; GO:0009793,embryo development ending in seed dormancy; 	--	NP_566559.1 pumilio 24 [Arabidopsis thaliana]
AT3G16840	7.83	12.34	21.19	17.64	AT3G16840	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_188307.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT3G16870	6.54	13.93	38.87	31.80	AT3G16870	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0030154,cell differentiation; GO:0043565,sequence-specific DNA binding; GO:0046872,metal ion binding; 	--	NP_188312.1 GATA transcription factor 17 [Arabidopsis thaliana]
AT3G16990	22.16	16.24	34.96	37.78	AT3G16990	GO:0005829,cytosol; GO:0006772,thiamine metabolic process; GO:0009228,thiamine biosynthetic process; GO:0009229,thiamine diphosphate biosynthetic process; GO:0016787,hydrolase activity; GO:0050334,thiaminase activity; 	TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]; K20896; 	NP_188324.1 heme oxygenase-like, multi-helical [Arabidopsis thaliana]
AT3G17100	69.98	54.62	89.60	108.92	AT3G17100	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0046983,protein dimerization activity; 	--	NP_566567.1 sequence-specific DNA binding transcription factor [Arabidopsis thaliana]
AT3G17150	15.20	22.27	4.86	5.47	AT3G17150	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; 	--	NP_188340.3 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT3G17225	4.20	4.15	0.00	0.00	AT3G17225	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_683571.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT3G17240	59.75	61.74	40.87	40.86	AT3G17240	GO:0000166,nucleotide binding; GO:0004148,dihydrolipoyl dehydrogenase activity; GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005747,mitochondrial respiratory chain complex I; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0008270,zinc ion binding; GO:0016491,oxidoreductase activity; GO:0016668,oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor; GO:0045252,oxoglutarate dehydrogenase complex; GO:0045454,cell redox homeostasis; GO:0050660,flavin adenine dinucleotide binding; GO:0050897,cobalt ion binding; 	DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4]; K00382; 	NP_566570.3 lipoamide dehydrogenase 2 [Arabidopsis thaliana]
AT3G17410	34.23	25.40	45.30	56.26	AT3G17410	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0009738,abscisic acid-activated signaling pathway; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0106310,protein serine kinase activity; GO:1902584,positive regulation of response to water deprivation; 	PTI1; pto-interacting protein 1 [EC:2.7.11.1]; K13436; 	NP_001326779.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT3G17430	19.73	14.84	10.17	7.69	AT3G17430	GO:0005794,Golgi apparatus; GO:0008643,carbohydrate transport; GO:0015297,antiporter activity; GO:0016020,membrane; GO:0055085,transmembrane transport; 	--	NP_001326874.1 Nucleotide-sugar transporter family protein [Arabidopsis thaliana]
AT3G17800	96.34	103.48	61.50	65.88	AT3G17800	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009611,response to wounding; GO:0010193,response to ozone; GO:0010224,response to UV-B; 	--	NP_566588.1 alanine-tRNA ligase, putative (DUF760) [Arabidopsis thaliana]
AT3G17810	162.05	169.86	111.17	111.08	AT3G17810	GO:0002058,uracil binding; GO:0005737,cytoplasm; GO:0006210,thymine catabolic process; GO:0006212,uracil catabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0017113,dihydropyrimidine dehydrogenase (NADP+) activity; GO:0019483,beta-alanine biosynthetic process; GO:0043562,cellular response to nitrogen levels; GO:0050661,NADP binding; GO:0051536,iron-sulfur cluster binding; 	DPYD; dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]; K00207; 	NP_188408.1 pyrimidine 1 [Arabidopsis thaliana]
AT3G17880	26.03	32.22	58.16	57.69	AT3G17880	GO:0000118,histone deacetylase complex; GO:0005515,protein binding; GO:0006457,protein folding; GO:0010286,heat acclimation; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0030544,Hsp70 protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051259,protein complex oligomerization; 	--	NP_188415.2 tetraticopeptide domain-containing thioredoxin [Arabidopsis thaliana]
AT3G18000	186.83	179.70	58.98	63.78	AT3G18000	GO:0000234,phosphoethanolamine N-methyltransferase activity; GO:0005737,cytoplasm; GO:0006629,lipid metabolic process; GO:0006656,phosphatidylcholine biosynthetic process; GO:0008168,methyltransferase activity; GO:0008654,phospholipid biosynthetic process; GO:0009555,pollen development; GO:0009826,unidimensional cell growth; GO:0009860,pollen tube growth; GO:0010183,pollen tube guidance; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042425,choline biosynthetic process; GO:0048528,post-embryonic root development; GO:0052667,phosphomethylethanolamine N-methyltransferase activity; GO:0071704,organic substance metabolic process; 	E2.1.1.103, NMT; phosphoethanolamine N-methyltransferase [EC:2.1.1.103]; K05929; 	NP_188427.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G18290	9.83	8.48	14.70	13.37	AT3G18290	GO:0005506,iron ion binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0008270,zinc ion binding; GO:0010106,cellular response to iron ion starvation; GO:0016020,membrane; GO:0016567,protein ubiquitination; GO:0016874,ligase activity; GO:0046872,metal ion binding; GO:0055072,iron ion homeostasis; GO:0060586,multicellular organismal iron ion homeostasis; GO:0061630,ubiquitin protein ligase activity; GO:0071456,cellular response to hypoxia; 	--	NP_188457.1 zinc finger protein-like protein [Arabidopsis thaliana]
AT3G18570	7.48	1.54	0.00	0.00	AT3G18570	GO:0003674,molecular_function; GO:0005811,lipid droplet; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0048608,reproductive structure development; 	--	NP_188487.1 Oleosin family protein [Arabidopsis thaliana]
AT3G18600	22.10	19.16	47.64	58.96	AT3G18600	GO:0000166,nucleotide binding; GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_188490.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT3G18610	3.07	2.56	9.71	7.49	AT3G18610	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0031491,nucleosome binding; GO:1990904,ribonucleoprotein complex; 	--	NP_001325664.1 nucleolin like 2 [Arabidopsis thaliana]
AT3G19070	8.78	1.73	0.32	0.42	AT3G19070	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_188537.1 Homeodomain-like superfamily protein [Arabidopsis thaliana]
AT3G19090	9.22	7.82	19.33	16.17	AT3G19090	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005844,polysome; GO:0006396,RNA processing; GO:1990904,ribonucleoprotein complex; 	--	NP_188540.1 RNA-binding protein [Arabidopsis thaliana]
AT3G19130	20.96	14.57	29.41	28.19	AT3G19130	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0006397,mRNA processing; GO:0008143,poly(A) binding; GO:0010494,cytoplasmic stress granule; GO:0034063,stress granule assembly; GO:0034605,cellular response to heat; 	--	NP_188544.1 RNA-binding protein 47B [Arabidopsis thaliana]
AT3G19250	0.22	0.00	5.30	1.60	AT3G19250	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_188556.2 transmembrane protein, putative (DUF677) [Arabidopsis thaliana]
AT3G19460	22.42	20.71	10.30	9.03	AT3G19460	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0009617,response to bacterium; GO:0016020,membrane; 	RTN3; reticulon-3; K20723; 	NP_001325445.1 Reticulon family protein [Arabidopsis thaliana]
AT3G19520	35.22	39.22	67.42	69.94	AT3G19520	--	--	NP_001327780.1 hypothetical protein (DUF626) [Arabidopsis thaliana]
AT3G19570	4.28	4.57	1.37	1.32	AT3G19570	GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005874,microtubule; GO:0005880,nuclear microtubule; GO:0008017,microtubule binding; GO:0009658,chloroplast organization; GO:0051225,spindle assembly; 	--	NP_850614.1 SNOWY COTYLEDON protein (DUF566) [Arabidopsis thaliana]
AT3G20000	210.11	202.68	382.08	427.28	AT3G20000	GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0005741,mitochondrial outer membrane; GO:0005742,mitochondrial outer membrane translocase complex; GO:0005743,mitochondrial inner membrane; GO:0005829,cytosol; GO:0006626,protein targeting to mitochondrion; GO:0006811,ion transport; GO:0008320,protein transmembrane transporter activity; GO:0015031,protein transport; GO:0015288,porin activity; GO:0015450,protein-transporting ATPase activity; GO:0016020,membrane; GO:0016036,cellular response to phosphate starvation; GO:0030150,protein import into mitochondrial matrix; GO:0046930,pore complex; GO:0055085,transmembrane transport; 	TOM40; mitochondrial import receptor subunit TOM40; K11518; 	NP_001326561.1 translocase of the outer mitochondrial membrane 40 [Arabidopsis thaliana]
AT3G20090	0.74	1.63	5.14	3.86	AT3G20090	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0008150,biological_process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_188644.2 cytochrome P450, family 705, subfamily A, polypeptide 18 [Arabidopsis thaliana]
AT3G20210	10.87	9.37	33.72	25.39	AT3G20210	GO:0000326,protein storage vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0005773,vacuole; GO:0006508,proteolysis; GO:0006624,vacuolar protein processing; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0009505,plant-type cell wall; GO:0010214,seed coat development; GO:0012501,programmed cell death; GO:0016787,hydrolase activity; GO:0051603,proteolysis involved in protein catabolic process; GO:0110165,cellular anatomical entity; 	LGMN; legumain [EC:3.4.22.34]; K01369; 	NP_188656.1 delta vacuolar processing enzyme [Arabidopsis thaliana]
AT3G20350	4.17	3.18	21.86	10.73	AT3G20350	--	--	NP_188670.1 actin cytoskeleton-regulatory complex pan-like protein [Arabidopsis thaliana]
AT3G20460	6.55	7.37	2.76	2.07	AT3G20460	GO:0008643,carbohydrate transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_188681.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT3G20510	46.86	40.77	23.43	18.08	AT3G20510	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009706,chloroplast inner membrane; GO:0012505,endomembrane system; GO:0015245,fatty acid transmembrane transporter activity; GO:0015908,fatty acid transport; GO:0016020,membrane; 	--	NP_188687.1 Transmembrane proteins 14C [Arabidopsis thaliana]
AT3G20790	78.32	134.06	48.03	64.18	AT3G20790	GO:0000166,nucleotide binding; GO:0006740,NADPH regeneration; GO:0016491,oxidoreductase activity; 	--	NP_188715.2 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT3G20810	1.93	3.89	7.18	8.64	AT3G20810	GO:0000791,euchromatin; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0006355,regulation of DNA-templated transcription; GO:0007623,circadian rhythm; GO:0009266,response to temperature stimulus; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009741,response to brassinosteroid; GO:0009742,brassinosteroid mediated signaling pathway; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009908,flower development; GO:0010378,temperature compensation of the circadian clock; GO:0010468,regulation of gene expression; GO:0016491,oxidoreductase activity; GO:0016706,2-oxoglutarate-dependent dioxygenase activity; GO:0040029,epigenetic regulation of gene expression; GO:0042752,regulation of circadian rhythm; GO:0043565,sequence-specific DNA binding; GO:0045814,negative regulation of gene expression, epigenetic; GO:0046872,metal ion binding; GO:0046975,histone methyltransferase activity (H3-K36 specific); GO:0051213,dioxygenase activity; GO:0061628,H3K27me3 modified histone binding; GO:0070544,histone H3-K36 demethylation; GO:0071558,histone H3-tri/di-methyl-lysine-27 demethylase activity; GO:0080022,primary root development; GO:0140680,histone H3-di/monomethyl-lysine-36 demethylase activity; GO:0140681,histone H3-tri/dimethyl-lysine-36 demethylase activity; GO:0140684,histone H3-tri/dimethyl-lysine-9 demethylase activity; GO:1900140,regulation of seedling development; GO:1900457,regulation of brassinosteroid mediated signaling pathway; GO:1990110,callus formation; GO:2000028,regulation of photoperiodism, flowering; 	--	NP_566667.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]
AT3G20870	24.81	24.17	7.31	12.53	AT3G20870	GO:0005385,zinc ion transmembrane transporter activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006811,ion transport; GO:0006829,zinc ion transport; GO:0016020,membrane; GO:0030001,metal ion transport; GO:0046873,metal ion transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0071577,zinc ion transmembrane transport; 	--	NP_001326769.1 ZIP metal ion transporter family [Arabidopsis thaliana]
AT3G21180	10.06	9.71	6.21	3.59	AT3G21180	GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005388,P-type calcium transporter activity; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006816,calcium ion transport; GO:0009555,pollen development; GO:0009567,double fertilization forming a zygote and endosperm; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0019829,ATPase-coupled cation transmembrane transporter activity; GO:0043231,intracellular membrane-bounded organelle; GO:0046872,metal ion binding; GO:0070588,calcium ion transmembrane transport; GO:0110165,cellular anatomical entity; 	ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]; K01537; 	NP_188755.2 autoinhibited Ca(2+)-ATPase 9 [Arabidopsis thaliana]
AT3G21540	8.82	10.68	16.71	13.76	AT3G21540	GO:0005515,protein binding; GO:0005730,nucleolus; GO:0030490,maturation of SSU-rRNA; GO:0030515,snoRNA binding; GO:0032040,small-subunit processome; GO:0034388,Pwp2p-containing subcomplex of 90S preribosome; 	DIP2, UTP12, WDR3; U3 small nucleolar RNA-associated protein 12; K14556; 	NP_188791.3 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT3G21700	11.01	20.26	4.06	8.06	AT3G21700	GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0090404,pollen tube tip; 	--	NP_850622.1 Ras-related small GTP-binding family protein [Arabidopsis thaliana]
AT3G21980	12.09	20.51	0.00	0.64	AT3G21980	--	--	NP_188836.1 cysteine-rich repeat secretory protein, putative (DUF26) [Arabidopsis thaliana]
AT3G22120	147.76	101.93	239.35	228.82	AT3G22120	GO:0003674,molecular_function; GO:0005575,cellular_component; 	--	NP_001327425.1 cell wall-plasma membrane linker protein [Arabidopsis thaliana]
AT3G22230	484.66	487.24	864.30	774.06	AT3G22230	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L27e, RPL27; large subunit ribosomal protein L27e; K02901; 	NP_188862.1 Ribosomal L27e protein family [Arabidopsis thaliana]
AT3G22231	10.48	9.42	0.00	0.00	AT3G22231	GO:0005886,plasma membrane; GO:0006629,lipid metabolic process; GO:0006952,defense response; GO:0007623,circadian rhythm; GO:0009617,response to bacterium; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009863,salicylic acid mediated signaling pathway; GO:0010513,positive regulation of phosphatidylinositol biosynthetic process; GO:0016020,membrane; GO:0046890,regulation of lipid biosynthetic process; GO:0055088,lipid homeostasis; GO:0071494,cellular response to UV-C; GO:1900150,regulation of defense response to fungus; GO:1902290,positive regulation of defense response to oomycetes; GO:2000028,regulation of photoperiodism, flowering; 	--	NP_566702.1 pathogen and circadian controlled 1 [Arabidopsis thaliana]
AT3G22320	204.34	197.92	311.24	398.71	AT3G22320	GO:0000418,RNA polymerase IV complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005665,RNA polymerase II, core complex; GO:0005666,RNA polymerase III complex; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0055029,nuclear DNA-directed RNA polymerase complex; 	RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1; K03013; 	NP_188871.1 Eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis thaliana]
AT3G22370	41.58	43.28	86.50	80.25	AT3G22370	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009916,alternative oxidase activity; GO:0010230,alternative respiration; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0031930,mitochondria-nucleus signaling pathway; GO:0043229,intracellular organelle; GO:0045333,cellular respiration; GO:0046872,metal ion binding; GO:0070469,respirasome; GO:0102721,ubiquinol:oxygen oxidoreductase activity; GO:0106292,superoxide-generating NADPH oxidase activity; 	AOX1, AOX2; ubiquinol oxidase [EC:1.10.3.11]; K17893; 	NP_188876.1 alternative oxidase 1A [Arabidopsis thaliana]
AT3G22660	36.39	41.75	84.94	60.50	AT3G22660	GO:0003723,RNA binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0030687,preribosome, large subunit precursor; GO:0034399,nuclear periphery; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_188905.1 rRNA processing protein-like protein [Arabidopsis thaliana]
AT3G22680	31.43	14.65	50.07	82.88	AT3G22680	GO:0000419,RNA polymerase V complex; GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0006306,DNA methylation; GO:0043621,protein self-association; GO:0044030,regulation of DNA methylation; GO:0070918,small regulatory ncRNA processing; 	--	NP_188907.2 RNA-DIRECTED DNA METHYLATION 1 [Arabidopsis thaliana]
AT3G22690	3.49	2.83	0.84	1.23	AT3G22690	GO:0005515,protein binding; GO:0008270,zinc ion binding; GO:0009409,response to cold; GO:0009451,RNA modification; GO:0009507,chloroplast; GO:0009644,response to high light intensity; GO:0010027,thylakoid membrane organization; GO:0010207,photosystem II assembly; GO:0010380,regulation of chlorophyll biosynthetic process; GO:0048564,photosystem I assembly; 	--	CAA0383349.1 unnamed protein product [Arabidopsis thaliana]
AT3G22720	2.67	2.71	10.06	6.09	AT3G22720	GO:0005515,protein binding; 	--	NP_188911.2 F-box/associated interaction domain protein [Arabidopsis thaliana]
AT3G22845	132.04	116.43	72.53	68.80	AT3G22845	GO:0000325,plant-type vacuole; GO:0005783,endoplasmic reticulum; GO:0005793,endoplasmic reticulum-Golgi intermediate compartment; GO:0005794,Golgi apparatus; GO:0006886,intracellular protein transport; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0007030,Golgi organization; GO:0015031,protein transport; GO:0016020,membrane; GO:0016192,vesicle-mediated transport; GO:0030134,COPII-coated ER to Golgi transport vesicle; GO:0032580,Golgi cisterna membrane; 	--	NP_188924.3 emp24/gp25L/p24 family/GOLD family protein [Arabidopsis thaliana]
AT3G22880	12.53	21.15	6.12	7.46	AT3G22880	GO:0000150,DNA strand exchange activity; GO:0000166,nucleotide binding; GO:0000730,DNA recombinase assembly; GO:0000794,condensed nuclear chromosome; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0003697,single-stranded DNA binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006312,mitotic recombination; GO:0006807,nitrogen compound metabolic process; GO:0007049,cell cycle; GO:0007127,meiosis I; GO:0007131,reciprocal meiotic recombination; GO:0008094,ATP-dependent activity, acting on DNA; GO:0042148,strand invasion; GO:0044260,cellular macromolecule metabolic process; GO:0051026,chiasma assembly; GO:0051321,meiotic cell cycle; GO:0070192,chromosome organization involved in meiotic cell cycle; GO:0140664,ATP-dependent DNA damage sensor activity; 	DMC1; meiotic recombination protein DMC1; K10872; 	NP_188928.2 DNA repair (Rad51) family protein [Arabidopsis thaliana]
AT3G22910	63.60	67.20	37.24	36.65	AT3G22910	GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005388,P-type calcium transporter activity; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006816,calcium ion transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0019829,ATPase-coupled cation transmembrane transporter activity; GO:0043231,intracellular membrane-bounded organelle; GO:0046872,metal ion binding; GO:0070588,calcium ion transmembrane transport; GO:0110165,cellular anatomical entity; 	ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]; K01537; 	NP_188931.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]
AT3G22930	0.00	0.00	3.16	4.87	AT3G22930	GO:0005509,calcium ion binding; GO:0046872,metal ion binding; 	CML; calcium-binding protein CML; K13448; 	NP_188933.1 calmodulin-like 11 [Arabidopsis thaliana]
AT3G22961	43.93	22.23	16.07	18.08	AT3G22961	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_001118679.1 Paired amphipathic helix (PAH2) superfamily protein [Arabidopsis thaliana]
AT3G22970	41.05	30.77	67.00	68.60	AT3G22970	--	--	NP_188937.1 hypothetical protein (DUF506) [Arabidopsis thaliana]
AT3G22980	9.45	9.97	17.49	13.81	AT3G22980	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005525,GTP binding; GO:0005840,ribosome; GO:0042256,mature ribosome assembly; GO:0043022,ribosome binding; GO:1990904,ribonucleoprotein complex; 	RIA1; ribosome assembly protein 1 [EC:3.6.5.-]; K14536; 	NP_001319621.1 Ribosomal protein S5/Elongation factor G/III/V family protein [Arabidopsis thaliana]
AT3G23390	143.67	202.44	472.21	332.86	AT3G23390	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L44e, RPL44; large subunit ribosomal protein L44e; K02929; 	NP_188981.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT3G23400	54.91	50.63	18.77	15.51	AT3G23400	GO:0005634,nucleus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0009941,chloroplast envelope; GO:0010193,response to ozone; GO:0010287,plastoglobule; GO:0031977,thylakoid lumen; GO:0042742,defense response to bacterium; 	--	NP_566728.1 Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana]
AT3G23450	482.20	518.04	324.04	353.37	AT3G23450	GO:0003729,mRNA binding; GO:0005576,extracellular region; GO:0043069,negative regulation of programmed cell death; 	--	AAN60357.1 unknown, partial [Arabidopsis thaliana]
AT3G23620	111.57	122.89	221.39	259.83	AT3G23620	GO:0000027,ribosomal large subunit assembly; GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000470,maturation of LSU-rRNA; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0019843,rRNA binding; GO:0032774,RNA biosynthetic process; 	--	NP_566734.1 Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
AT3G23727	21.83	17.54	4.84	4.66	AT3G23727	GO:0005576,extracellular region; GO:0006952,defense response; GO:0007165,signal transduction; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001030752.1 SCR-like 12 [Arabidopsis thaliana]
AT3G23830	70.12	65.16	147.79	120.33	AT3G23830	GO:0003676,nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0003697,single-stranded DNA binding; GO:0003723,RNA binding; GO:0003727,single-stranded RNA binding; GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006858,extracellular transport; GO:0006970,response to osmotic stress; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009651,response to salt stress; GO:0035197,siRNA binding; GO:0035198,miRNA binding; GO:0050658,RNA transport; GO:0050688,regulation of defense response to virus; GO:1900864,mitochondrial RNA modification; GO:1990428,miRNA transport; 	--	NP_189025.1 glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
AT3G23840	67.52	72.17	39.01	37.44	AT3G23840	GO:0009535,chloroplast thylakoid membrane; GO:0009555,pollen development; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0042761,very long-chain fatty acid biosynthetic process; GO:0071555,cell wall organization; 	--	NP_566741.1 HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]
AT3G24170	81.38	99.23	50.39	47.72	AT3G24170	GO:0000166,nucleotide binding; GO:0004362,glutathione-disulfide reductase (NADPH) activity; GO:0004791,thioredoxin-disulfide reductase activity; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0006749,glutathione metabolic process; GO:0016491,oxidoreductase activity; GO:0016668,oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor; GO:0045454,cell redox homeostasis; GO:0050660,flavin adenine dinucleotide binding; GO:0050661,NADP binding; GO:0098869,cellular oxidant detoxification; 	GSR, gor; glutathione reductase (NADPH) [EC:1.8.1.7]; K00383; 	NP_001030756.2 glutathione-disulfide reductase [Arabidopsis thaliana]
AT3G25050	304.60	322.10	137.99	149.57	AT3G25050	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005576,extracellular region; GO:0005618,cell wall; GO:0005975,carbohydrate metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009832,plant-type cell wall biogenesis; GO:0010411,xyloglucan metabolic process; GO:0016740,transferase activity; GO:0016762,xyloglucan:xyloglucosyl transferase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0030243,cellulose metabolic process; GO:0030247,polysaccharide binding; GO:0042546,cell wall biogenesis; GO:0048046,apoplast; GO:0048573,photoperiodism, flowering; GO:0071555,cell wall organization; 	E2.4.1.207; xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]; K08235; 	NP_189141.1 xyloglucan endotransglucosylase/hydrolase 3 [Arabidopsis thaliana]
AT3G25470	26.64	35.81	56.24	44.05	AT3G25470	GO:0003723,RNA binding; GO:0008168,methyltransferase activity; GO:0032259,methylation; 	--	NP_566765.1 bacterial hemolysin-like protein [Arabidopsis thaliana]
AT3G25810	22.56	19.20	9.20	3.62	AT3G25810	GO:0000287,magnesium ion binding; GO:0005515,protein binding; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0010333,terpene synthase activity; GO:0010334,sesquiterpene synthase activity; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016829,lyase activity; GO:0034002,(R)-limonene synthase activity; GO:0034768,(E)-beta-ocimene synthase activity; GO:0043693,monoterpene biosynthetic process; GO:0046872,metal ion binding; GO:0050550,pinene synthase activity; GO:0050551,myrcene synthase activity; GO:0050552,(4S)-limonene synthase activity; GO:0080015,sabinene synthase activity; 	E4.2.3.15; myrcene/ocimene synthase [EC:4.2.3.15]; K12467; 	NP_189209.2 Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]
AT3G25940	11.71	3.58	28.12	36.15	AT3G25940	GO:0000428,DNA-directed RNA polymerase complex; GO:0003676,nucleic acid binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0006363,termination of RNA polymerase I transcription; GO:0006379,mRNA cleavage; GO:0008270,zinc ion binding; GO:0046872,metal ion binding; 	RPA12, ZNRD1; DNA-directed RNA polymerase I subunit RPA12; K03000; 	NP_566786.1 TFIIB zinc-binding protein [Arabidopsis thaliana]
AT3G26040	9.52	9.49	2.79	4.24	AT3G26040	GO:0008150,biological_process; 	--	NP_189233.1 HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]
AT3G26060	197.87	219.01	136.19	143.31	AT3G26060	GO:0003729,mRNA binding; GO:0004601,peroxidase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008379,thioredoxin peroxidase activity; GO:0009507,chloroplast; GO:0009533,chloroplast stromal thylakoid; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0034599,cellular response to oxidative stress; GO:0045454,cell redox homeostasis; GO:0051920,peroxiredoxin activity; GO:0098869,cellular oxidant detoxification; GO:0140824,thioredoxin-dependent peroxiredoxin activity; 	BCP, PRXQ, DOT5; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]; K03564; 	NP_189235.1 Thioredoxin superfamily protein [Arabidopsis thaliana]
AT3G26110	161.64	155.70	101.15	95.28	AT3G26110	GO:0016020,membrane; 	--	KAG7626620.1 hypothetical protein ISN45_At03g027600 [Arabidopsis thaliana x Arabidopsis arenosa]
AT3G26125	52.45	52.89	19.51	28.01	AT3G26125	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_189243.1 cytochrome P450, family 86, subfamily C, polypeptide 2 [Arabidopsis thaliana]
AT3G26220	0.00	0.00	0.67	1.44	AT3G26220	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_189253.1 cytochrome P450, family 71, subfamily B, polypeptide 3 [Arabidopsis thaliana]
AT3G26600	131.09	154.81	26.66	27.70	AT3G26600	GO:0005515,protein binding; GO:0007166,cell surface receptor signaling pathway; GO:0009506,plasmodesma; 	--	NP_001327909.1 armadillo repeat only 4 [Arabidopsis thaliana]
AT3G26650	733.36	618.14	463.25	450.20	AT3G26650	GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0004365,glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity; GO:0005515,protein binding; GO:0005829,cytosol; GO:0006006,glucose metabolic process; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009744,response to sucrose; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016620,oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0019253,reductive pentose-phosphate cycle; GO:0031969,chloroplast membrane; GO:0042802,identical protein binding; GO:0042803,protein homodimerization activity; GO:0047100,glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity; GO:0048046,apoplast; GO:0050661,NADP binding; GO:0051287,NAD binding; GO:0051289,protein homotetramerization; GO:0097718,disordered domain specific binding; GO:0099080,supramolecular complex; GO:1901149,salicylic acid binding; 	GAPA; glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]; K05298; 	NP_566796.2 glyceraldehyde 3-phosphate dehydrogenase A subunit [Arabidopsis thaliana]
AT3G26730	14.57	15.90	41.27	51.63	AT3G26730	GO:0000976,transcription cis-regulatory region binding; GO:0005737,cytoplasm; GO:0016020,membrane; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0046872,metal ion binding; 	--	NP_189307.2 RING/U-box superfamily protein [Arabidopsis thaliana]
AT3G26840	19.69	17.48	32.05	33.58	AT3G26840	GO:0004144,diacylglycerol O-acyltransferase activity; GO:0005515,protein binding; GO:0006995,cellular response to nitrogen starvation; GO:0008374,O-acyltransferase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0010287,plastoglobule; GO:0010866,regulation of triglyceride biosynthetic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019432,triglyceride biosynthetic process; GO:0033306,phytol metabolic process; GO:0044249,cellular biosynthetic process; GO:0090693,plant organ senescence; GO:1901576,organic substance biosynthetic process; GO:1904963,regulation of phytol biosynthetic process; 	--	NP_566801.1 Esterase/lipase/thioesterase family protein [Arabidopsis thaliana]
AT3G26890	19.58	21.52	39.28	32.93	AT3G26890	GO:0008150,biological_process; 	--	NP_001030777.1 meiosis chromosome segregation family protein [Arabidopsis thaliana]
AT3G26950	6.97	10.48	3.89	3.42	AT3G26950	GO:0003674,molecular_function; GO:0016020,membrane; 	--	NP_189331.2 transmembrane protein [Arabidopsis thaliana]
AT3G27180	8.73	11.74	15.17	22.57	AT3G27180	GO:0001510,RNA methylation; GO:0006396,RNA processing; GO:0008168,methyltransferase activity; GO:0008173,RNA methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; 	--	NP_189354.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G27230	28.50	25.90	14.78	19.00	AT3G27230	GO:0000138,Golgi trans cisterna; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0032259,methylation; 	--	NP_566813.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G27340	1.36	3.48	9.12	11.72	AT3G27340	GO:0046872,metal ion binding; 	--	NP_001325872.1 Myb domain protein [Arabidopsis thaliana]
AT3G27360	355.14	335.82	200.33	252.27	AT3G27360	GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0010369,chromocenter; GO:0030527,structural constituent of chromatin; GO:0046982,protein heterodimerization activity; 	H3; histone H3; K11253; 	NP_001131276.1 histone H3.2 [Zea mays]
AT3G27380	111.29	107.29	75.12	57.33	AT3G27380	GO:0000104,succinate dehydrogenase activity; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005829,cytosol; GO:0006099,tricarboxylic acid cycle; GO:0006121,mitochondrial electron transport, succinate to ubiquinone; GO:0008177,succinate dehydrogenase (ubiquinone) activity; GO:0008270,zinc ion binding; GO:0009055,electron transfer activity; GO:0009060,aerobic respiration; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0022900,electron transport chain; GO:0022904,respiratory electron transport chain; GO:0045273,respiratory chain complex II; GO:0045281,succinate dehydrogenase complex; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0051538,3 iron, 4 sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; 	SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]; K00235; 	NP_001118718.1 succinate dehydrogenase 2-1 [Arabidopsis thaliana]
AT3G27400	7.68	10.50	19.96	15.95	AT3G27400	GO:0005829,cytosol; GO:0009624,response to nematode; GO:0016829,lyase activity; GO:0030570,pectate lyase activity; GO:0045490,pectin catabolic process; GO:0046872,metal ion binding; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_001326295.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT3G27520	5.89	5.61	22.61	12.35	AT3G27520	--	--	NP_566819.1 cryptic loci regulator [Arabidopsis thaliana]
AT3G27550	5.42	6.74	17.45	9.24	AT3G27550	GO:0000373,Group II intron splicing; GO:0003674,molecular_function; GO:0003723,RNA binding; GO:0005739,mitochondrion; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0009414,response to water deprivation; GO:0009651,response to salt stress; GO:0009737,response to abscisic acid; GO:0140040,mitochondrial polycistronic RNA processing; GO:1990904,ribonucleoprotein complex; 	--	NP_001327916.1 RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
AT3G27640	1.31	1.76	5.04	4.86	AT3G27640	GO:0005515,protein binding; GO:0005634,nucleus; GO:0030674,protein-macromolecule adaptor activity; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_566822.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT3G27690	443.51	443.53	259.58	235.04	AT3G27690	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009269,response to desiccation; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009517,PSII associated light-harvesting complex II; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0009645,response to low light intensity stimulus; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009769,photosynthesis, light harvesting in photosystem II; GO:0009941,chloroplast envelope; GO:0010114,response to red light; GO:0010218,response to far red light; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0030104,water homeostasis; GO:0046872,metal ion binding; GO:0071215,cellular response to abscisic acid stimulus; GO:0090333,regulation of stomatal closure; GO:1903428,positive regulation of reactive oxygen species biosynthetic process; 	LHCB2; light-harvesting complex II chlorophyll a/b binding protein 2; K08913; 	NP_001325794.1 photosystem II light harvesting complex protein 2.3 [Arabidopsis thaliana]
AT3G27740	44.39	41.22	75.95	67.44	AT3G27740	GO:0000166,nucleotide binding; GO:0004088,carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005951,carbamoyl-phosphate synthase complex; GO:0006207,'de novo' pyrimidine nucleobase biosynthetic process; GO:0006221,pyrimidine nucleotide biosynthetic process; GO:0006526,arginine biosynthetic process; GO:0006541,glutamine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016036,cellular response to phosphate starvation; GO:0016874,ligase activity; GO:0044205,'de novo' UMP biosynthetic process; 	carA, CPA1; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]; K01956; 	NP_566824.1 carbamoyl phosphate synthetase A [Arabidopsis thaliana]
AT3G27770	12.11	15.21	6.41	5.95	AT3G27770	GO:0016020,membrane; 	--	NP_566825.1 plant/protein [Arabidopsis thaliana]
AT3G28130	9.75	6.29	1.22	3.93	AT3G28130	GO:0005886,plasma membrane; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_001325436.1 nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]
AT3G28750	19.41	17.73	6.40	2.16	AT3G28750	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_189517.1 hypothetical protein AT3G28750 [Arabidopsis thaliana]
AT3G28780	39.45	43.49	26.33	25.28	AT3G28780	GO:0003674,molecular_function; GO:0010584,pollen exine formation; 	--	NP_189520.2 transmembrane protein, putative (DUF1216) [Arabidopsis thaliana]
AT3G28790	114.39	136.15	65.94	70.05	AT3G28790	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_189521.1 transmembrane protein, putative (DUF1216) [Arabidopsis thaliana]
AT3G28810	35.19	43.81	20.69	22.94	AT3G28810	GO:0008150,biological_process; 	--	NP_189523.1 mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) [Arabidopsis thaliana]
AT3G28910	12.53	9.54	23.95	18.74	AT3G28910	GO:0000976,transcription cis-regulatory region binding; GO:0001666,response to hypoxia; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006952,defense response; GO:0009617,response to bacterium; GO:0009626,plant-type hypersensitive response; GO:0009644,response to high light intensity; GO:0009733,response to auxin; GO:0010100,negative regulation of photomorphogenesis; GO:0042761,very long-chain fatty acid biosynthetic process; GO:1990837,sequence-specific double-stranded DNA binding; 	MYB30; transcription factor MYB30; K23865; 	NP_189533.1 myb domain protein 30 [Arabidopsis thaliana]
AT3G28960	4.81	5.07	1.11	1.42	AT3G28960	GO:0000325,plant-type vacuole; GO:0003333,amino acid transmembrane transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0015171,amino acid transmembrane transporter activity; GO:0016020,membrane; 	SLC32A, VGAT; solute carrier family 32 (vesicular inhibitory amino acid transporter); K15015; 	NP_001319665.1 Transmembrane amino acid transporter family protein [Arabidopsis thaliana]
AT3G29020	0.00	0.00	0.98	2.52	AT3G29020	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; 	--	NP_001078220.1 myb domain protein 110 [Arabidopsis thaliana]
AT3G29110	31.58	25.64	58.69	72.79	AT3G29110	GO:0000287,magnesium ion binding; GO:0005737,cytoplasm; GO:0008299,isoprenoid biosynthetic process; GO:0009975,cyclase activity; GO:0010333,terpene synthase activity; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016829,lyase activity; GO:0046872,metal ion binding; GO:0051762,sesquiterpene biosynthetic process; 	--	NP_189555.2 Terpenoid cyclases/Protein prenyltransferases superfamily protein [Arabidopsis thaliana]
AT3G29190	1.69	0.86	3.74	8.89	AT3G29190	GO:0000287,magnesium ion binding; GO:0005737,cytoplasm; GO:0008299,isoprenoid biosynthetic process; GO:0009975,cyclase activity; GO:0010333,terpene synthase activity; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016829,lyase activity; GO:0046872,metal ion binding; GO:0051762,sesquiterpene biosynthetic process; 	--	BAB01815.1 terpene cyclase (terpene synthase) [Arabidopsis thaliana]
AT3G30770	0.00	0.00	1.86	0.72	AT3G30770	GO:0004816,asparagine-tRNA ligase activity; GO:0005739,mitochondrion; GO:0006421,asparaginyl-tRNA aminoacylation; GO:0006508,proteolysis; GO:0008233,peptidase activity; 	--	NP_189700.4 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT3G42960	50.35	70.74	28.43	34.43	AT3G42960	GO:0005575,cellular_component; GO:0016491,oxidoreductase activity; GO:0042802,identical protein binding; 	--	NP_189882.1 TAPETUM 1 [Arabidopsis thaliana]
AT3G43083	27.68	20.64	4.27	7.32	AT3G43083	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001030801.1 low-molecular-weight cysteine-rich 33 [Arabidopsis thaliana]
AT3G43540	18.07	19.19	35.97	31.95	AT3G43540	GO:0003674,molecular_function; GO:0003743,translation initiation factor activity; GO:0006413,translational initiation; GO:0008150,biological_process; GO:0009507,chloroplast; 	--	NP_974379.1 initiation factor 4F subunit (DUF1350) [Arabidopsis thaliana]
AT3G43710	4.12	7.47	0.30	0.76	AT3G43710	GO:0005515,protein binding; 	--	NP_189957.1 Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]
AT3G43810	331.76	289.64	207.98	198.52	AT3G43810	GO:0005509,calcium ion binding; GO:0005513,detection of calcium ion; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0010099,regulation of photomorphogenesis; GO:0016020,membrane; GO:0046872,metal ion binding; GO:0050832,defense response to fungus; 	CALM; calmodulin; K02183; 	NP_001326523.1 calmodulin 7 [Arabidopsis thaliana]
AT3G43980	164.41	164.14	400.60	395.76	AT3G43980	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0008270,zinc ion binding; GO:0022627,cytosolic small ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S29e, RPS29; small subunit ribosomal protein S29e; K02980; 	NP_001319679.1 Ribosomal protein S14p/S29e family protein [Arabidopsis thaliana]
AT3G44010	733.01	822.21	1805.64	1425.75	AT3G44010	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0008270,zinc ion binding; GO:0022627,cytosolic small ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S29e, RPS29; small subunit ribosomal protein S29e; K02980; 	NP_001319679.1 Ribosomal protein S14p/S29e family protein [Arabidopsis thaliana]
AT3G44300	9.88	5.55	31.10	19.56	AT3G44300	GO:0000257,nitrilase activity; GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006807,nitrogen compound metabolic process; GO:0009684,indoleacetic acid biosynthetic process; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016836,hydro-lyase activity; GO:0018822,nitrile hydratase activity; GO:0047427,cyanoalanine nitrilase activity; GO:0051410,detoxification of nitrogen compound; GO:0080061,indole-3-acetonitrile nitrilase activity; GO:0080109,indole-3-acetonitrile nitrile hydratase activity; 	E3.5.5.1; nitrilase [EC:3.5.5.1]; K01501; 	NP_190016.1 nitrilase 2 [Arabidopsis thaliana]
AT3G44620	40.98	53.20	86.82	91.82	AT3G44620	GO:0003993,acid phosphatase activity; GO:0004725,protein tyrosine phosphatase activity; GO:0005515,protein binding; GO:0005829,cytosol; GO:0006470,protein dephosphorylation; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0016787,hydrolase activity; GO:0016791,phosphatase activity; 	--	NP_190048.2 protein-tyrosine phosphatase [Arabidopsis thaliana]
AT3G44720	25.17	32.92	14.56	19.73	AT3G44720	GO:0004664,prephenate dehydratase activity; GO:0005737,cytoplasm; GO:0006952,defense response; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009094,L-phenylalanine biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016829,lyase activity; GO:0047769,arogenate dehydratase activity; 	ADT, PDT; arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51]; K05359; 	NP_190058.1 arogenate dehydratase 4 [Arabidopsis thaliana]
AT3G44750	153.02	144.45	222.22	253.35	AT3G44750	GO:0004407,histone deacetylase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006325,chromatin organization; GO:0009294,DNA-mediated transformation; GO:0009944,polarity specification of adaxial/abaxial axis; GO:0010162,seed dormancy process; GO:0016570,histone modification; GO:0016787,hydrolase activity; GO:0045892,negative regulation of DNA-templated transcription; GO:0046872,metal ion binding; GO:0048364,root development; 	--	NP_566872.1 histone deacetylase 3 [Arabidopsis thaliana]
AT3G44890	78.10	84.97	56.81	38.71	AT3G44890	GO:0000311,plastid large ribosomal subunit; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L9, MRPL9, rplI; large subunit ribosomal protein L9; K02939; 	NP_190075.1 ribosomal protein L9 [Arabidopsis thaliana]
AT3G44920	9.96	7.01	11.48	18.08	AT3G44920	GO:0006811,ion transport; GO:0006812,cation transport; GO:0006813,potassium ion transport; GO:0006885,regulation of pH; GO:0012505,endomembrane system; GO:0015297,antiporter activity; GO:0015299,solute:proton antiporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0055085,transmembrane transport; GO:1902600,proton transmembrane transport; 	--	NP_190078.2 cation/H+ exchanger 11 [Arabidopsis thaliana]
AT3G45040	38.15	42.80	14.02	15.59	AT3G45040	GO:0004168,dolichol kinase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006486,protein glycosylation; GO:0009555,pollen development; GO:0010483,pollen tube reception; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0043048,dolichyl monophosphate biosynthetic process; 	DOLK; dolichol kinase [EC:2.7.1.108]; K00902; 	NP_190090.2 phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana]
AT3G45300	43.43	46.90	32.37	27.16	AT3G45300	GO:0003824,catalytic activity; GO:0003995,acyl-CoA dehydrogenase activity; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0006552,leucine catabolic process; GO:0008470,isovaleryl-CoA dehydrogenase activity; GO:0009083,branched-chain amino acid catabolic process; GO:0010230,alternative respiration; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0050660,flavin adenine dinucleotide binding; GO:1901565,organonitrogen compound catabolic process; 	IVD, ivd; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]; K00253; 	NP_190116.1 isovaleryl-CoA-dehydrogenase [Arabidopsis thaliana]
AT3G45640	26.10	31.47	52.15	38.20	AT3G45640	GO:0000165,MAPK cascade; GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004707,MAP kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005938,cell cortex; GO:0006468,protein phosphorylation; GO:0006952,defense response; GO:0006970,response to osmotic stress; GO:0006979,response to oxidative stress; GO:0009409,response to cold; GO:0009555,pollen development; GO:0009611,response to wounding; GO:0009617,response to bacterium; GO:0009626,plant-type hypersensitive response; GO:0009738,abscisic acid-activated signaling pathway; GO:0009875,pollen-pistil interaction; GO:0010120,camalexin biosynthetic process; GO:0010183,pollen tube guidance; GO:0010200,response to chitin; GO:0010224,response to UV-B; GO:0010229,inflorescence development; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0035556,intracellular signal transduction; GO:0048481,plant ovule development; GO:0050826,response to freezing; GO:0080136,priming of cellular response to stress; GO:0106310,protein serine kinase activity; GO:1902065,response to L-glutamate; 	MPK3; mitogen-activated protein kinase 3 [EC:2.7.11.24]; K20536; 	NP_190150.1 mitogen-activated protein kinase 3 [Arabidopsis thaliana]
AT3G45730	1.07	0.00	20.03	19.81	AT3G45730	--	--	NP_190159.1 hypothetical protein AT3G45730 [Arabidopsis thaliana]
AT3G45970	193.75	182.53	106.31	135.63	AT3G45970	GO:0005576,extracellular region; GO:0005794,Golgi apparatus; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009653,anatomical structure morphogenesis; GO:0016020,membrane; GO:0099503,secretory vesicle; 	--	NP_190183.1 expansin-like A1 [Arabidopsis thaliana]
AT3G45980	319.11	260.92	194.42	180.04	AT3G45980	GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0006334,nucleosome assembly; GO:0009534,chloroplast thylakoid; GO:0009570,chloroplast stroma; GO:0030527,structural constituent of chromatin; GO:0046982,protein heterodimerization activity; 	H2B; histone H2B; K11252; 	XP_010503210.1 PREDICTED: histone H2B.6 isoform X1 [Camelina sativa]
AT3G46030	309.18	320.41	181.82	183.23	AT3G46030	GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005829,cytosol; GO:0006334,nucleosome assembly; GO:0009506,plasmodesma; GO:0030527,structural constituent of chromatin; GO:0046982,protein heterodimerization activity; 	H2B; histone H2B; K11252; 	NP_190189.1 Histone superfamily protein [Arabidopsis thaliana]
AT3G46040	246.81	258.16	451.65	410.63	AT3G46040	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S15Ae, RPS15A; small subunit ribosomal protein S15Ae; K02957; 	NP_190190.1 ribosomal protein S15A D [Arabidopsis thaliana]
AT3G46210	20.50	15.02	54.37	46.39	AT3G46210	GO:0000176,nuclear exosome (RNase complex); GO:0000177,cytoplasmic exosome (RNase complex); GO:0000178,exosome (RNase complex); GO:0003674,molecular_function; GO:0003690,double-stranded DNA binding; GO:0003723,RNA binding; GO:0003727,single-stranded RNA binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0004536,deoxyribonuclease activity; GO:0004540,ribonuclease activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006259,DNA metabolic process; GO:0006364,rRNA processing; GO:0016075,rRNA catabolic process; GO:0016787,hydrolase activity; GO:0034427,nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'; GO:0034475,U4 snRNA 3'-end processing; GO:0042802,identical protein binding; GO:0071028,nuclear mRNA surveillance; GO:0071051,polyadenylation-dependent snoRNA 3'-end processing; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090501,RNA phosphodiester bond hydrolysis; GO:1990904,ribonucleoprotein complex; 	RRP46, EXOSC5; exosome complex component RRP46; K12590; 	NP_001030817.1 Ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis thaliana]
AT3G46520	85.33	87.65	47.91	65.42	AT3G46520	GO:0000166,nucleotide binding; GO:0005200,structural constituent of cytoskeleton; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0007010,cytoskeleton organization; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016787,hydrolase activity; 	--	NP_001327017.1 actin-12 [Arabidopsis thaliana]
AT3G47070	114.44	130.88	86.87	65.86	AT3G47070	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; 	--	NP_190291.1 thylakoid soluble phosphoprotein [Arabidopsis thaliana]
AT3G47430	0.34	0.38	3.45	6.34	AT3G47430	GO:0005515,protein binding; GO:0005777,peroxisome; GO:0005778,peroxisomal membrane; GO:0005779,integral component of peroxisomal membrane; GO:0005829,cytosol; GO:0007031,peroxisome organization; GO:0016020,membrane; GO:0016559,peroxisome fission; GO:0042802,identical protein binding; GO:0044375,regulation of peroxisome size; 	--	NP_190327.1 peroxin 11B [Arabidopsis thaliana]
AT3G47470	2030.20	2110.46	947.17	1108.06	AT3G47470	GO:0003729,mRNA binding; GO:0005829,cytosol; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0009645,response to low light intensity stimulus; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; GO:0046872,metal ion binding; 	LHCA4; light-harvesting complex I chlorophyll a/b binding protein 4; K08910; 	NP_190331.3 light-harvesting chlorophyll-protein complex I subunit A4 [Arabidopsis thaliana]
AT3G47610	8.40	10.91	20.35	19.09	AT3G47610	GO:0003713,transcription coactivator activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0045893,positive regulation of DNA-templated transcription; 	--	NP_190345.1 transcription regulator/ zinc ion binding protein [Arabidopsis thaliana]
AT3G47890	3.98	5.53	6.95	9.12	AT3G47890	GO:0004843,cysteine-type deubiquitinase activity; GO:0005515,protein binding; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016579,protein deubiquitination; GO:0016787,hydrolase activity; 	--	NP_001319705.1 Ubiquitin carboxyl-terminal hydrolase-related protein [Arabidopsis thaliana]
AT3G48231	55.92	34.97	4.17	1.79	AT3G48231	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001030830.1 low-molecular-weight cysteine-rich 48 [Arabidopsis thaliana]
AT3G48290	19.26	29.50	12.01	12.92	AT3G48290	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_001190031.2 cytochrome P450, family 71, subfamily A, polypeptide 24 [Arabidopsis thaliana]
AT3G48420	32.95	40.24	18.98	18.98	AT3G48420	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	--	NP_566903.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]
AT3G48640	12.15	24.03	2.00	2.57	AT3G48640	GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_001319710.1 transmembrane protein [Arabidopsis thaliana]
AT3G48660	3.47	0.95	22.50	11.25	AT3G48660	GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_190435.1 transmembrane protein, putative (DUF 3339) [Arabidopsis thaliana]
AT3G48690	62.72	60.22	40.49	32.93	AT3G48690	GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0016787,hydrolase activity; GO:0052689,carboxylic ester hydrolase activity; 	--	NP_190438.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT3G48730	150.74	170.40	85.85	86.52	AT3G48730	GO:0003824,catalytic activity; GO:0005829,cytosol; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006782,protoporphyrinogen IX biosynthetic process; GO:0008483,transaminase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0015995,chlorophyll biosynthetic process; GO:0016853,isomerase activity; GO:0030170,pyridoxal phosphate binding; GO:0033014,tetrapyrrole biosynthetic process; GO:0042286,glutamate-1-semialdehyde 2,1-aminomutase activity; GO:0042803,protein homodimerization activity; 	hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]; K01845; 	NP_190442.1 glutamate-1-semialdehyde 2,1-aminomutase 2 [Arabidopsis thaliana]
AT3G48760	23.25	22.85	40.32	40.93	AT3G48760	GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006612,protein targeting to membrane; GO:0016020,membrane; GO:0016409,palmitoyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0018230,peptidyl-L-cysteine S-palmitoylation; GO:0019706,protein-cysteine S-palmitoyltransferase activity; 	--	NP_190445.2 DHHC-type zinc finger family protein [Arabidopsis thaliana]
AT3G48770	4.48	5.29	8.58	8.60	AT3G48770	GO:0003677,DNA binding; GO:0008150,biological_process; GO:0046872,metal ion binding; 	--	NP_001319711.1 ATP/DNA binding protein [Arabidopsis thaliana]
AT3G48890	123.15	138.66	89.41	80.95	AT3G48890	GO:0005496,steroid binding; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0008289,lipid binding; GO:0009535,chloroplast thylakoid membrane; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0019904,protein domain specific binding; 	--	NP_190458.1 membrane-associated progesterone binding protein 3 [Arabidopsis thaliana]
AT3G48930	458.88	573.66	1224.03	970.02	AT3G48930	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S11e, RPS11; small subunit ribosomal protein S11e; K02949; 	NP_190462.1 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
AT3G48950	4.32	2.01	0.24	0.62	AT3G48950	GO:0004650,polygalacturonase activity; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016829,lyase activity; 	--	NP_001319713.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT3G48990	108.88	105.67	64.43	69.92	AT3G48990	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006631,fatty acid metabolic process; GO:0006952,defense response; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0010030,positive regulation of seed germination; GO:0010214,seed coat development; GO:0016874,ligase activity; GO:0031956,medium-chain fatty acid-CoA ligase activity; GO:0033611,oxalate catabolic process; GO:0048046,apoplast; GO:0050203,oxalate-CoA ligase activity; GO:0050832,defense response to fungus; 	AAE3; oxalate---CoA ligase [EC:6.2.1.8]; K22133; 	NP_190468.1 AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana]
AT3G49010	522.91	514.60	948.77	836.19	AT3G49010	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L13e, RPL13; large subunit ribosomal protein L13e; K02873; 	NP_001030831.1 breast basic conserved 1 [Arabidopsis thaliana]
AT3G49330	3.40	2.07	0.00	0.00	AT3G49330	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_001327755.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT3G49480	10.76	16.02	2.25	0.64	AT3G49480	GO:0005515,protein binding; 	--	NP_001327389.1 F-box/FBD/LRR protein [Arabidopsis thaliana]
AT3G49580	3.58	3.94	10.32	22.55	AT3G49580	GO:0005515,protein binding; GO:0009651,response to salt stress; GO:0010438,cellular response to sulfur starvation; GO:0098869,cellular oxidant detoxification; 	--	NP_001327932.1 response to low sulfur 1 [Arabidopsis thaliana]
AT3G49800	39.14	29.81	25.43	18.54	AT3G49800	--	--	NP_190549.1 BSD domain-containing protein [Arabidopsis thaliana]
AT3G49910	1433.36	1287.53	2546.54	2341.21	AT3G49910	GO:0000325,plant-type vacuole; GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042273,ribosomal large subunit biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L26e, RPL26; large subunit ribosomal protein L26e; K02898; 	NP_190560.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT3G49990	53.57	56.83	87.88	93.72	AT3G49990	GO:0000056,ribosomal small subunit export from nucleus; GO:0005634,nucleus; GO:0005829,cytosol; GO:0030688,preribosome, small subunit precursor; GO:0042274,ribosomal small subunit biogenesis; 	--	NP_190568.1 Low temperature viability protein [Arabidopsis thaliana]
AT3G50410	25.52	28.39	49.60	48.39	AT3G50410	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0009733,response to auxin; GO:0009751,response to salicylic acid; GO:0042545,cell wall modification; GO:0045787,positive regulation of cell cycle; GO:0045893,positive regulation of DNA-templated transcription; GO:0046872,metal ion binding; 	--	NP_190610.1 OBF binding protein 1 [Arabidopsis thaliana]
AT3G50820	561.26	550.95	316.78	331.89	AT3G50820	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0008266,poly(U) RNA binding; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009654,photosystem II oxygen evolving complex; GO:0010205,photoinhibition; GO:0010207,photosystem II assembly; GO:0010242,oxygen evolving activity; GO:0010287,plastoglobule; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019684,photosynthesis, light reaction; GO:0031977,thylakoid lumen; GO:0035304,regulation of protein dephosphorylation; GO:0042549,photosystem II stabilization; 	psbO; photosystem II oxygen-evolving enhancer protein 1; K02716; 	NP_190651.1 photosystem II subunit O-2 [Arabidopsis thaliana]
AT3G50880	55.29	60.15	106.74	88.66	AT3G50880	GO:0003824,catalytic activity; GO:0005634,nucleus; GO:0006281,DNA repair; GO:0006284,base-excision repair; GO:0006285,base-excision repair, AP site formation; GO:0006307,DNA dealkylation involved in DNA repair; GO:0008152,metabolic process; GO:0008725,DNA-3-methyladenine glycosylase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0032131,alkylated DNA binding; GO:0032993,protein-DNA complex; GO:0043916,DNA-7-methylguanine glycosylase activity; 	alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]; K01247; 	NP_190657.1 DNA glycosylase superfamily protein [Arabidopsis thaliana]
AT3G51000	132.81	127.43	70.48	75.43	AT3G51000	GO:0003824,catalytic activity; GO:0016787,hydrolase activity; 	--	NP_190669.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT3G51030	44.14	36.57	20.54	16.35	AT3G51030	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008047,enzyme activator activity; GO:0015035,protein-disulfide reductase activity; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0043085,positive regulation of catalytic activity; 	trxA; thioredoxin 1; K03671; 	NP_190672.1 thioredoxin H-type 1 [Arabidopsis thaliana]
AT3G51070	17.05	14.93	9.72	5.61	AT3G51070	GO:0003674,molecular_function; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0008168,methyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; 	--	NP_190676.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G51160	84.57	86.52	39.70	54.13	AT3G51160	GO:0000166,nucleotide binding; GO:0005525,GTP binding; GO:0005829,cytosol; GO:0008446,GDP-mannose 4,6-dehydratase activity; GO:0009826,unidimensional cell growth; GO:0016829,lyase activity; GO:0019673,GDP-mannose metabolic process; GO:0042350,GDP-L-fucose biosynthetic process; GO:0042351,'de novo' GDP-L-fucose biosynthetic process; 	gmd, GMDS; GDPmannose 4,6-dehydratase [EC:4.2.1.47]; K01711; 	NP_190685.2 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT3G51280	41.31	41.03	27.92	25.83	AT3G51280	GO:0005515,protein binding; GO:0005634,nucleus; GO:0007049,cell cycle; GO:0051301,cell division; 	--	NP_190696.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT3G51590	343.62	331.90	191.22	251.85	AT3G51590	GO:0006869,lipid transport; GO:0008289,lipid binding; GO:0009505,plant-type cell wall; 	--	NP_190727.1 lipid transfer protein 12 [Arabidopsis thaliana]
AT3G51800	123.75	146.47	221.61	208.99	AT3G51800	GO:0001558,regulation of cell growth; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0006364,rRNA processing; GO:0009734,auxin-activated signaling pathway; GO:0044843,cell cycle G1/S phase transition; GO:0051302,regulation of cell division; GO:1990904,ribonucleoprotein complex; 	--	NP_190748.1 metallopeptidase M24 family protein [Arabidopsis thaliana]
AT3G52090	84.47	87.00	135.44	136.73	AT3G52090	GO:0000418,RNA polymerase IV complex; GO:0000419,RNA polymerase V complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0001055,RNA polymerase II activity; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005665,RNA polymerase II, core complex; GO:0006351,DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0046983,protein dimerization activity; 	RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11; K03008; 	NP_190777.1 DNA-directed RNA polymerase, RBP11-like protein [Arabidopsis thaliana]
AT3G52130	74.35	76.91	27.00	18.51	AT3G52130	GO:0016020,membrane; 	--	NP_001319728.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT3G52150	135.59	124.02	68.20	78.56	AT3G52150	GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003697,single-stranded DNA binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005829,cytosol; GO:0005840,ribosome; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009651,response to salt stress; GO:0009941,chloroplast envelope; GO:0010029,regulation of seed germination; GO:0019843,rRNA binding; GO:0080148,negative regulation of response to water deprivation; GO:1900140,regulation of seedling development; GO:1901001,negative regulation of response to salt stress; GO:1901259,chloroplast rRNA processing; GO:1990904,ribonucleoprotein complex; 	PABPC; polyadenylate-binding protein; K13126; 	NP_001030841.1 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
AT3G52160	24.36	24.12	10.20	11.52	AT3G52160	GO:0006633,fatty acid biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; 	KCS; 3-ketoacyl-CoA synthase [EC:2.3.1.199]; K15397; 	ABK28598.1 unknown, partial [Arabidopsis thaliana]
AT3G52230	110.73	85.25	185.67	180.26	AT3G52230	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009707,chloroplast outer membrane; GO:0009941,chloroplast envelope; 	--	NP_566963.1 hypothetical protein AT3G52230 [Arabidopsis thaliana]
AT3G52526	0.00	0.52	12.37	6.18	AT3G52526	GO:0005982,starch metabolic process; GO:0007623,circadian rhythm; GO:0016020,membrane; GO:0019203,carbohydrate phosphatase activity; 	--	NP_001327384.1 phosphoglucan phosphatase [Arabidopsis thaliana]
AT3G52590	503.69	563.58	1139.65	931.52	AT3G52590	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0016567,protein ubiquitination; GO:0019941,modification-dependent protein catabolic process; GO:0022625,cytosolic large ribosomal subunit; GO:0031386,protein tag; GO:0031625,ubiquitin protein ligase binding; GO:1990904,ribonucleoprotein complex; 	RP-L40e, RPL40, UBA52; ubiquitin-large subunit ribosomal protein L40e; K02927; 	NP_565836.1 60S ribosomal protein L40-1 [Arabidopsis thaliana]
AT3G53020	478.10	474.19	797.67	695.69	AT3G53020	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005840,ribosome; GO:0009734,auxin-activated signaling pathway; GO:0009955,adaxial/abaxial pattern specification; GO:0009965,leaf morphogenesis; GO:0022625,cytosolic large ribosomal subunit; GO:0048467,gynoecium development; GO:1990904,ribonucleoprotein complex; 	RP-L24e, RPL24; large subunit ribosomal protein L24e; K02896; 	NP_190870.1 Ribosomal protein L24e family protein [Arabidopsis thaliana]
AT3G53040	1.79	6.26	0.94	0.60	AT3G53040	GO:0005829,cytosol; GO:0010227,floral organ abscission; 	--	NP_190872.1 late embryogenesis abundant protein, putative / LEA protein [Arabidopsis thaliana]
AT3G53140	27.12	25.51	14.69	14.46	AT3G53140	GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008168,methyltransferase activity; GO:0008171,O-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0008938,nicotinate N-methyltransferase activity; GO:0016740,transferase activity; GO:0019438,aromatic compound biosynthetic process; GO:0032259,methylation; GO:0046983,protein dimerization activity; GO:1901847,nicotinate metabolic process; 	--	NP_190882.1 O-methyltransferase family protein [Arabidopsis thaliana]
AT3G53235	0.00	0.00	3.91	6.29	AT3G53235	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_680126.1 hypothetical protein AT3G53235 [Arabidopsis thaliana]
AT3G53260	67.22	71.97	48.25	44.91	AT3G53260	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006559,L-phenylalanine catabolic process; GO:0006979,response to oxidative stress; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009800,cinnamic acid biosynthetic process; GO:0016829,lyase activity; GO:0016841,ammonia-lyase activity; GO:0045548,phenylalanine ammonia-lyase activity; 	PAL; phenylalanine ammonia-lyase [EC:4.3.1.24]; K10775; 	NP_190894.1 phenylalanine ammonia-lyase 2 [Arabidopsis thaliana]
AT3G53370	3.04	10.03	45.29	56.34	AT3G53370	GO:0003674,molecular_function; GO:0003677,DNA binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0016020,membrane; 	--	NP_566985.1 S1FA-like DNA-binding protein [Arabidopsis thaliana]
AT3G53510	15.30	9.05	4.41	7.82	AT3G53510	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0010345,suberin biosynthetic process; GO:0016020,membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; GO:1903825,organic acid transmembrane transport; 	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2; K05681; 	NP_190919.1 ABC-2 type transporter family protein [Arabidopsis thaliana]
AT3G53520	115.21	111.65	190.65	192.15	AT3G53520	GO:0000138,Golgi trans cisterna; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0005829,cytosol; GO:0016020,membrane; GO:0016829,lyase activity; GO:0016831,carboxy-lyase activity; GO:0032580,Golgi cisterna membrane; GO:0033320,UDP-D-xylose biosynthetic process; GO:0042732,D-xylose metabolic process; GO:0048040,UDP-glucuronate decarboxylase activity; GO:0070403,NAD+ binding; 	UXS1, uxs; UDP-glucuronate decarboxylase [EC:4.1.1.35]; K08678; 	NP_001190080.1 UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana]
AT3G53630	16.69	9.36	48.07	56.75	AT3G53630	GO:0005515,protein binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009941,chloroplast envelope; 	--	NP_190931.2 hypothetical protein AT3G53630 [Arabidopsis thaliana]
AT3G53740	879.10	1105.98	3224.17	2683.50	AT3G53740	GO:0000325,plant-type vacuole; GO:0002181,cytoplasmic translation; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L36e, RPL36; large subunit ribosomal protein L36e; K02920; 	NP_001030855.1 Ribosomal protein L36e family protein [Arabidopsis thaliana]
AT3G53750	137.39	124.89	73.20	94.11	AT3G53750	GO:0000166,nucleotide binding; GO:0005200,structural constituent of cytoskeleton; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0007010,cytoskeleton organization; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0016787,hydrolase activity; GO:0048589,developmental growth; GO:0048767,root hair elongation; 	--	NP_001031504.1 actin 1 [Arabidopsis thaliana]
AT3G54085	20.76	20.64	61.22	45.76	AT3G54085	GO:0000139,Golgi membrane; GO:0003674,molecular_function; GO:0005789,endoplasmic reticulum membrane; GO:0006888,endoplasmic reticulum to Golgi vesicle-mediated transport; GO:0015031,protein transport; GO:0016020,membrane; GO:0030134,COPII-coated ER to Golgi transport vesicle; 	--	NP_001078282.1 Yos1-like protein [Arabidopsis thaliana]
AT3G54130	8.06	9.16	26.82	18.01	AT3G54130	GO:0004843,cysteine-type deubiquitinase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016579,protein deubiquitination; GO:0016787,hydrolase activity; 	ATXN3, MJD; Ataxin-3 [EC:3.4.22.-]; K11863; 	NP_190981.1 Josephin family protein [Arabidopsis thaliana]
AT3G54200	34.75	42.55	67.68	63.11	AT3G54200	GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0016020,membrane; 	--	NP_190988.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT3G54290	33.60	30.08	16.98	23.07	AT3G54290	GO:0055072,iron ion homeostasis; 	--	NP_566997.1 hemerythrin HHE cation-binding domain protein [Arabidopsis thaliana]
AT3G54310	1.96	1.43	0.00	0.00	AT3G54310	GO:0000428,DNA-directed RNA polymerase complex; GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_190999.1 DNA-directed RNA polymerase subunit alpha [Arabidopsis thaliana]
AT3G54710	4.17	7.58	14.32	11.28	AT3G54710	GO:0000076,DNA replication checkpoint signaling; GO:0000278,mitotic cell cycle; GO:0003677,DNA binding; GO:0004693,cyclin-dependent protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006260,DNA replication; GO:0007049,cell cycle; GO:0009658,chloroplast organization; GO:0030174,regulation of DNA-templated DNA replication initiation; GO:0048229,gametophyte development; GO:0051276,chromosome organization; GO:0070182,DNA polymerase binding; GO:0071163,DNA replication preinitiation complex assembly; 	--	NP_191031.1 CDT1-like protein B [Arabidopsis thaliana]
AT3G54840	47.83	39.84	73.19	69.19	AT3G54840	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005768,endosome; GO:0005769,early endosome; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006886,intracellular protein transport; GO:0006897,endocytosis; GO:0010008,endosome membrane; GO:0010009,cytoplasmic side of endosome membrane; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031901,early endosome membrane; GO:0045022,early endosome to late endosome transport; 	--	NP_567008.1 Ras-related small GTP-binding family protein [Arabidopsis thaliana]
AT3G54890	732.12	819.10	383.01	394.02	AT3G54890	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0009645,response to low light intensity stimulus; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; GO:0046872,metal ion binding; 	LHCA1; light-harvesting complex I chlorophyll a/b binding protein 1; K08907; 	NP_191049.1 chlorophyll a-b binding protein 6 [Arabidopsis thaliana]
AT3G55005	30.57	28.28	80.66	67.82	AT3G55005	GO:0000226,microtubule cytoskeleton organization; GO:0000913,preprophase band assembly; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0030865,cortical cytoskeleton organization; GO:0030981,cortical microtubule cytoskeleton; 	--	NP_567013.1 tonneau 1b (TON1b) [Arabidopsis thaliana]
AT3G55010	42.05	31.91	57.97	62.66	AT3G55010	GO:0000166,nucleotide binding; GO:0004637,phosphoribosylamine-glycine ligase activity; GO:0004641,phosphoribosylformylglycinamidine cyclo-ligase activity; GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006164,purine nucleotide biosynthetic process; GO:0006189,'de novo' IMP biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016874,ligase activity; GO:0046084,adenine biosynthetic process; 	purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; K01933; 	NP_191061.1 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) [Arabidopsis thaliana]
AT3G55100	4.83	7.77	2.54	1.31	AT3G55100	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0016020,membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; 	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2; K05681; 	NP_001319754.1 ABC-2 type transporter family protein [Arabidopsis thaliana]
AT3G55130	17.64	16.08	8.52	12.15	AT3G55130	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005775,vacuolar lumen; GO:0007034,vacuolar transport; GO:0016020,membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; 	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2; K05681; 	NP_191073.1 white-brown complex homolog 19 [Arabidopsis thaliana]
AT3G55160	3.74	3.30	8.50	7.33	AT3G55160	GO:0009631,cold acclimation; GO:0030488,tRNA methylation; GO:0032006,regulation of TOR signaling; 	--	NP_001319755.1 thyroid adenoma-associated-like protein [Arabidopsis thaliana]
AT3G55252	19.64	14.39	1.35	4.33	AT3G55252	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0008150,biological_process; GO:0060320,rejection of self pollen; 	--	NP_001078292.1 Plant self-incompatibility protein S1 family [Arabidopsis thaliana]
AT3G55280	259.99	247.54	593.62	571.89	AT3G55280	GO:0000027,ribosomal large subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0006979,response to oxidative stress; GO:0009409,response to cold; GO:0009644,response to high light intensity; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L23Ae, RPL23A; large subunit ribosomal protein L23Ae; K02893; 	KAG7628595.1 Ribosomal protein L25/L23 [Arabidopsis thaliana x Arabidopsis arenosa]
AT3G55340	10.32	7.03	17.87	18.38	AT3G55340	GO:0000914,phragmoplast assembly; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0008270,zinc ion binding; GO:0009524,phragmoplast; GO:0009920,cell plate formation involved in plant-type cell wall biogenesis; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0046872,metal ion binding; 	--	NP_191094.1 phragmoplastin interacting protein 1 [Arabidopsis thaliana]
AT3G55510	10.56	13.98	21.98	29.67	AT3G55510	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0010582,floral meristem determinacy; GO:0030690,Noc1p-Noc2p complex; GO:0030691,Noc2p-Noc3p complex; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_001326972.1 Noc2p family [Arabidopsis thaliana]
AT3G55710	18.14	20.67	11.37	11.20	AT3G55710	GO:0005575,cellular_component; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; 	--	NP_191130.1 UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]
AT3G55780	6.56	1.13	0.89	0.00	AT3G55780	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; 	--	NP_001319762.1 Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]
AT3G55920	24.90	20.24	36.35	49.89	AT3G55920	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0016018,cyclosporin A binding; GO:0016853,isomerase activity; GO:0043231,intracellular membrane-bounded organelle; 	E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]; K01802; 	NP_567029.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT3G56020	402.50	333.44	938.80	962.17	AT3G56020	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	RP-L41e, RPL41; large subunit ribosomal protein L41e; K02928; 	--
AT3G56240	469.86	438.32	171.49	154.09	AT3G56240	GO:0005829,cytosol; GO:0006811,ion transport; GO:0006825,copper ion transport; GO:0006878,cellular copper ion homeostasis; GO:0009507,chloroplast; GO:0016531,copper chaperone activity; GO:0019904,protein domain specific binding; GO:0046686,response to cadmium ion; GO:0046872,metal ion binding; GO:0050896,response to stimulus; 	--	CAE6076414.1 unnamed protein product [Arabidopsis arenosa]
AT3G56360	48.06	51.72	33.17	27.81	AT3G56360	GO:0009536,plastid; 	--	NP_191195.1 hypothetical protein AT3G56360 [Arabidopsis thaliana]
AT3G56430	19.21	13.62	11.12	5.65	AT3G56430	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0005773,vacuole; GO:0009536,plastid; GO:0016020,membrane; GO:0043231,intracellular membrane-bounded organelle; 	--	NP_191202.1 import inner membrane translocase subunit [Arabidopsis thaliana]
AT3G56690	4.81	5.87	11.66	7.63	AT3G56690	GO:0000166,nucleotide binding; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0016887,ATP hydrolysis activity; 	--	NP_191228.1 Cam interacting protein 111 [Arabidopsis thaliana]
AT3G56980	0.00	0.66	4.34	3.35	AT3G56980	GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0010106,cellular response to iron ion starvation; GO:0046983,protein dimerization activity; GO:0055072,iron ion homeostasis; GO:0090575,RNA polymerase II transcription regulator complex; 	--	NP_191257.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Arabidopsis thaliana]
AT3G57150	65.54	59.14	113.28	106.54	AT3G57150	GO:0000495,box H/ACA RNA 3'-end processing; GO:0001522,pseudouridine synthesis; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0009451,RNA modification; GO:0009506,plasmodesma; GO:0009982,pseudouridine synthase activity; GO:0016853,isomerase activity; GO:0031118,rRNA pseudouridine synthesis; GO:0031120,snRNA pseudouridine synthesis; GO:0031429,box H/ACA snoRNP complex; GO:0042254,ribosome biogenesis; GO:1990481,mRNA pseudouridine synthesis; GO:1990904,ribonucleoprotein complex; 	DKC1, NOLA4, CBF5; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]; K11131; 	NP_191274.1 homologue of NAP57 [Arabidopsis thaliana]
AT3G57490	33.55	46.17	67.00	78.83	AT3G57490	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0015935,small ribosomal subunit; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S2e, RPS2; small subunit ribosomal protein S2e; K02981; 	NP_191308.1 Ribosomal protein S5 family protein [Arabidopsis thaliana]
AT3G57520	94.75	89.72	161.31	146.47	AT3G57520	GO:0005975,carbohydrate metabolic process; GO:0006979,response to oxidative stress; GO:0009506,plasmodesma; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0034484,raffinose catabolic process; GO:0047274,galactinol-sucrose galactosyltransferase activity; GO:0052692,raffinose alpha-galactosidase activity; 	E2.4.1.82; raffinose synthase [EC:2.4.1.82]; K06617; 	NP_191311.1 seed imbibition 2 [Arabidopsis thaliana]
AT3G57610	48.67	62.41	95.99	75.39	AT3G57610	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0004019,adenylosuccinate synthase activity; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0006164,purine nucleotide biosynthetic process; GO:0006167,AMP biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016874,ligase activity; GO:0044208,'de novo' AMP biosynthetic process; GO:0046040,IMP metabolic process; GO:0046872,metal ion binding; GO:0048046,apoplast; 	purA, ADSS; adenylosuccinate synthase [EC:6.3.4.4]; K01939; 	NP_191320.1 adenylosuccinate synthase [Arabidopsis thaliana]
AT3G57660	16.40	12.59	29.42	23.02	AT3G57660	GO:0000428,DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0008270,zinc ion binding; GO:0009506,plasmodesma; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0042254,ribosome biogenesis; GO:0046872,metal ion binding; 	RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]; K02999; 	NP_001325828.1 nuclear RNA polymerase A1 [Arabidopsis thaliana]
AT3G57810	30.85	31.26	18.40	8.48	AT3G57810	GO:0004843,cysteine-type deubiquitinase activity; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0016579,protein deubiquitination; GO:0016787,hydrolase activity; 	--	NP_001078307.1 Cysteine proteinases superfamily protein [Arabidopsis thaliana]
AT3G57940	9.64	9.09	18.47	16.02	AT3G57940	GO:0000049,tRNA binding; GO:0000154,rRNA modification; GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006807,nitrogen compound metabolic process; GO:0008033,tRNA processing; GO:0008080,N-acetyltransferase activity; GO:0016072,rRNA metabolic process; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0034470,ncRNA processing; GO:0042274,ribosomal small subunit biogenesis; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0051391,tRNA acetylation; GO:1904812,rRNA acetylation involved in maturation of SSU-rRNA; GO:1990883,rRNA cytidine N-acetyltransferase activity; 	NAT10, KRE33; N-acetyltransferase 10 [EC:2.3.1.-]; K14521; 	NP_191353.2 GNAT acetyltransferase (DUF699) [Arabidopsis thaliana]
AT3G58270	5.68	3.99	17.33	15.13	AT3G58270	GO:0005515,protein binding; 	--	NP_001030883.1 phospholipase-like protein (PEARLI 4) with TRAF-like domain protein [Arabidopsis thaliana]
AT3G58660	56.96	44.36	98.39	86.05	AT3G58660	GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0030686,90S preribosome; 	--	NP_191425.1 Ribosomal protein L1p/L10e family [Arabidopsis thaliana]
AT3G58670	1.29	1.77	7.87	5.36	AT3G58670	GO:0005506,iron ion binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0016491,oxidoreductase activity; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0017172,cysteine dioxygenase activity; GO:0018171,peptidyl-cysteine oxidation; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:0070483,detection of hypoxia; GO:0071456,cellular response to hypoxia; 	PCO; plant cysteine oxidase [EC:1.13.11.-]; K23953; 	NP_001078310.1 2-aminoethanethiol dioxygenase, putative (DUF1637) [Arabidopsis thaliana]
AT3G58730	114.76	113.03	78.57	67.89	AT3G58730	GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0016020,membrane; GO:0033176,proton-transporting V-type ATPase complex; GO:0046961,proton-transporting ATPase activity, rotational mechanism; GO:1902600,proton transmembrane transport; 	ATPeV1D, ATP6M; V-type H+-transporting ATPase subunit D; K02149; 	NP_191432.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) [Arabidopsis thaliana]
AT3G58810	1.44	0.99	7.79	3.34	AT3G58810	GO:0005385,zinc ion transmembrane transporter activity; GO:0005773,vacuole; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006829,zinc ion transport; GO:0008324,cation transmembrane transporter activity; GO:0009705,plant-type vacuole membrane; GO:0010043,response to zinc ion; GO:0010312,detoxification of zinc ion; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0055085,transmembrane transport; GO:0071577,zinc ion transmembrane transport; GO:0098655,cation transmembrane transport; 	--	NP_974456.1 metal tolerance protein A2 [Arabidopsis thaliana]
AT3G58920	5.47	4.92	32.96	23.95	AT3G58920	GO:0005515,protein binding; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_191451.1 F-box/RNI-like superfamily protein [Arabidopsis thaliana]
AT3G59280	31.98	43.04	216.19	135.34	AT3G59280	GO:0002237,response to molecule of bacterial origin; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005744,TIM23 mitochondrial import inner membrane translocase complex; GO:0006952,defense response; GO:0009734,auxin-activated signaling pathway; GO:0015031,protein transport; GO:0016020,membrane; GO:0030150,protein import into mitochondrial matrix; GO:0031348,negative regulation of defense response; GO:1900425,negative regulation of defense response to bacterium; GO:1902009,positive regulation of toxin transport; GO:1902289,negative regulation of defense response to oomycetes; GO:2000012,regulation of auxin polar transport; GO:2000378,negative regulation of reactive oxygen species metabolic process; 	--	NP_001327906.1 Protein Transporter, Pam16 [Arabidopsis thaliana]
AT3G59410	3.73	3.22	1.58	1.24	AT3G59410	GO:0000049,tRNA binding; GO:0000166,nucleotide binding; GO:0003723,RNA binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004694,eukaryotic translation initiation factor 2alpha kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006417,regulation of translation; GO:0006468,protein phosphorylation; GO:0006521,regulation of cellular amino acid metabolic process; GO:0009635,response to herbicide; GO:0010998,regulation of translational initiation by eIF2 alpha phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018105,peptidyl-serine phosphorylation; GO:0034198,cellular response to amino acid starvation; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0070301,cellular response to hydrogen peroxide; GO:0072755,cellular response to benomyl; GO:0080090,regulation of primary metabolic process; GO:0106310,protein serine kinase activity; GO:1990451,cellular stress response to acidic pH; 	EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1]; K16196; 	NP_001326041.1 protein kinase family protein [Arabidopsis thaliana]
AT3G59510	48.16	36.58	16.34	18.25	AT3G59510	GO:0005515,protein binding; 	--	NP_191510.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT3G59540	1802.92	2077.21	3459.64	3505.62	AT3G59540	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022618,ribonucleoprotein complex assembly; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L38e, RPL38; large subunit ribosomal protein L38e; K02923; 	NP_181874.1 Ribosomal L38e protein family [Arabidopsis thaliana]
AT3G59570	3.43	0.91	0.45	0.19	AT3G59570	GO:0005096,GTPase activator activity; GO:0090630,activation of GTPase activity; 	--	NP_001325779.1 Ypt/Rab-GAP domain of gyp1p superfamily protein [Arabidopsis thaliana]
AT3G59640	4.11	2.78	10.93	14.64	AT3G59640	GO:0005886,plasma membrane; GO:0016020,membrane; GO:0050832,defense response to fungus; 	--	NP_001078314.1 glycine-rich protein [Arabidopsis thaliana]
AT3G59670	3.62	5.30	10.42	9.21	AT3G59670	GO:0003746,translation elongation factor activity; GO:0006414,translational elongation; 	--	NP_191526.2 elongation factor [Arabidopsis thaliana]
AT3G59840	74.11	56.93	105.60	116.57	AT3G59840	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009941,chloroplast envelope; 	--	NP_567086.1 allyl alcohol dehydrogenase-like protein [Arabidopsis thaliana]
AT3G60180	1.52	2.51	9.88	9.88	AT3G60180	GO:0000166,nucleotide binding; GO:0004127,cytidylate kinase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006139,nucleobase-containing compound metabolic process; GO:0006207,'de novo' pyrimidine nucleobase biosynthetic process; GO:0006221,pyrimidine nucleotide biosynthetic process; GO:0006225,UDP biosynthetic process; GO:0009041,uridylate kinase activity; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0019205,nucleobase-containing compound kinase activity; GO:0033862,UMP kinase activity; GO:0036430,CMP kinase activity; GO:0036431,dCMP kinase activity; GO:0046705,CDP biosynthetic process; GO:0046940,nucleoside monophosphate phosphorylation; GO:0072528,pyrimidine-containing compound biosynthetic process; 	CMPK1, UMPK; UMP-CMP kinase [EC:2.7.4.14]; K13800; 	NP_567093.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT3G60245	1233.59	1171.24	1952.12	1785.01	AT3G60245	GO:0003674,molecular_function; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-L37Ae, RPL37A; large subunit ribosomal protein L37Ae; K02921; 	NP_567096.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT3G60330	2.03	1.60	0.23	0.15	AT3G60330	GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0008553,P-type proton-exporting transporter activity; GO:0015662,P-type ion transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0034220,ion transmembrane transport; GO:0046872,metal ion binding; GO:0051453,regulation of intracellular pH; GO:0120029,proton export across plasma membrane; GO:1902600,proton transmembrane transport; 	PMA1, PMA2; H+-transporting ATPase [EC:7.1.2.1]; K01535; 	NP_001190141.1 H[+]-ATPase 7 [Arabidopsis thaliana]
AT3G60480	20.30	29.32	77.68	56.91	AT3G60480	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_567100.1 StAR lipid transfer-like protein [Arabidopsis thaliana]
AT3G60600	106.69	100.38	159.38	199.50	AT3G60600	GO:0000326,protein storage vacuole; GO:0005515,protein binding; GO:0005773,vacuole; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0016020,membrane; GO:0032586,protein storage vacuole membrane; GO:0046907,intracellular transport; GO:0061817,endoplasmic reticulum-plasma membrane tethering; GO:0090158,endoplasmic reticulum membrane organization; 	--	NP_567101.1 vesicle associated protein [Arabidopsis thaliana]
AT3G60800	17.50	17.84	40.54	44.60	AT3G60800	GO:0000138,Golgi trans cisterna; GO:0005769,early endosome; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0006612,protein targeting to membrane; GO:0010150,leaf senescence; GO:0016020,membrane; GO:0016409,palmitoyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0018230,peptidyl-L-cysteine S-palmitoylation; GO:0019706,protein-cysteine S-palmitoyltransferase activity; GO:0019707,protein-cysteine S-acyltransferase activity; GO:1900055,regulation of leaf senescence; GO:2000377,regulation of reactive oxygen species metabolic process; 	--	NP_191639.2 DHHC-type zinc finger family protein [Arabidopsis thaliana]
AT3G61110	874.32	828.75	1772.57	1710.32	AT3G61110	GO:0000028,ribosomal small subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S27e, RPS27; small subunit ribosomal protein S27e; K02978; 	NP_191670.1 ribosomal protein S27 [Arabidopsis thaliana]
AT3G61130	67.90	71.95	43.06	51.28	AT3G61130	GO:0000139,Golgi membrane; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0010289,homogalacturonan biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0045489,pectin biosynthetic process; GO:0047262,polygalacturonate 4-alpha-galacturonosyltransferase activity; GO:0071555,cell wall organization; 	GAUT; alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]; K13648; 	NP_191672.1 galacturonosyltransferase 1 [Arabidopsis thaliana]
AT3G61210	8.64	11.79	2.15	3.31	AT3G61210	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_191680.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G61580	785.48	615.72	1025.34	1268.66	AT3G61580	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006665,sphingolipid metabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016717,oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; GO:0030148,sphingolipid biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046872,metal ion binding; GO:0052631,sphingolipid delta-8 desaturase activity; GO:0070417,cellular response to cold; 	SLD; sphingolipid 8-(E/Z)-desaturase [EC:1.14.19.29]; K21734; 	NP_191717.1 Fatty acid/sphingolipid desaturase [Arabidopsis thaliana]
AT3G61630	7.17	5.43	55.53	42.10	AT3G61630	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009736,cytokinin-activated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0048366,leaf development; GO:0048825,cotyledon development; 	--	NP_191722.1 cytokinin response factor 6 [Arabidopsis thaliana]
AT3G61870	150.65	121.11	52.19	60.66	AT3G61870	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009706,chloroplast inner membrane; GO:0009941,chloroplast envelope; GO:0016020,membrane; 	--	NP_191746.1 plant/protein [Arabidopsis thaliana]
AT3G61920	0.00	1.37	7.78	16.92	AT3G61920	--	--	NP_191751.1 UvrABC system protein C [Arabidopsis thaliana]
AT3G62120	126.78	150.82	225.81	229.57	AT3G62120	GO:0000166,nucleotide binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004827,proline-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006433,prolyl-tRNA aminoacylation; GO:0009506,plasmodesma; GO:0016874,ligase activity; GO:0017101,aminoacyl-tRNA synthetase multienzyme complex; 	PARS, proS; prolyl-tRNA synthetase [EC:6.1.1.15]; K01881; 	NP_001326276.1 Class II aaRS and biotin synthetases superfamily protein [Arabidopsis thaliana]
AT3G62170	83.14	73.45	35.90	39.28	AT3G62170	GO:0004857,enzyme inhibitor activity; GO:0005576,extracellular region; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; GO:0071555,cell wall organization; GO:0090406,pollen tube; 	--	NP_191776.1 VANGUARD-like protein [Arabidopsis thaliana]
AT3G62280	3.76	1.61	0.00	0.39	AT3G62280	GO:0005576,extracellular region; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_001326329.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT3G62400	56.25	59.11	93.49	111.03	AT3G62400	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005746,mitochondrial respirasome; GO:0016020,membrane; 	--	NP_850738.1 cytochrome C oxidase subunit [Arabidopsis thaliana]
AT3G62410	237.84	210.69	124.41	163.23	AT3G62410	GO:0005507,copper ion binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009744,response to sucrose; GO:0016151,nickel cation binding; GO:0018316,peptide cross-linking via L-cystine; GO:0019253,reductive pentose-phosphate cycle; GO:0019899,enzyme binding; GO:0030674,protein-macromolecule adaptor activity; GO:0032991,protein-containing complex; GO:0034605,cellular response to heat; GO:0044877,protein-containing complex binding; GO:0065003,protein-containing complex assembly; GO:0070417,cellular response to cold; GO:0071454,cellular response to anoxia; GO:0080153,negative regulation of reductive pentose-phosphate cycle; GO:0099080,supramolecular complex; 	--	NP_191800.1 CP12 domain-containing protein 2 [Arabidopsis thaliana]
AT3G62420	5.31	5.26	9.18	25.58	AT3G62420	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006971,hypotonic response; GO:0009267,cellular response to starvation; GO:0043565,sequence-specific DNA binding; GO:0045735,nutrient reservoir activity; GO:0045893,positive regulation of DNA-templated transcription; GO:0046982,protein heterodimerization activity; GO:2000693,positive regulation of seed maturation; 	--	NP_191801.1 basic region/leucine zipper motif 53 [Arabidopsis thaliana]
AT3G62460	31.86	47.40	91.78	102.88	AT3G62460	GO:0004519,endonuclease activity; GO:0004540,ribonuclease activity; GO:0005739,mitochondrion; GO:0005777,peroxisome; GO:0010468,regulation of gene expression; GO:0016787,hydrolase activity; GO:0035194,post-transcriptional gene silencing by RNA; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090501,RNA phosphodiester bond hydrolysis; GO:1903231,mRNA base-pairing post-transcriptional repressor activity; 	--	NP_191805.1 Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
AT3G62820	44.86	37.86	72.10	67.48	AT3G62820	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; 	--	NP_191841.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT3G62870	204.21	195.05	298.06	314.53	AT3G62870	GO:0000325,plant-type vacuole; GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005829,cytosol; GO:0005840,ribosome; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042254,ribosome biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L7Ae, RPL7A; large subunit ribosomal protein L7Ae; K02936; 	NP_191846.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT3G62900	7.12	4.16	10.50	8.24	AT3G62900	GO:0008270,zinc ion binding; GO:0009506,plasmodesma; GO:0046872,metal ion binding; 	--	NP_001319823.1 CW-type Zinc Finger [Arabidopsis thaliana]
AT3G63052	521.03	556.01	2504.84	1648.92	AT3G63052	GO:0003674,molecular_function; 	--	NP_001118897.1 hypothetical protein AT3G63052 [Arabidopsis thaliana]
AT3G63140	136.43	125.69	58.04	52.94	AT3G63140	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0007623,circadian rhythm; GO:0008266,poly(U) RNA binding; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0010319,stromule; GO:0019843,rRNA binding; GO:0032544,plastid translation; GO:0045727,positive regulation of translation; GO:0045893,positive regulation of DNA-templated transcription; GO:0048046,apoplast; 	--	NP_191873.1 chloroplast stem-loop binding protein of 41 kDa [Arabidopsis thaliana]
AT3G63170	86.74	73.57	55.44	45.96	AT3G63170	GO:0005504,fatty acid binding; GO:0005829,cytosol; GO:0006631,fatty acid metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016872,intramolecular lyase activity; 	--	NP_567140.1 Chalcone-flavanone isomerase family protein [Arabidopsis thaliana]
AT3G63190	136.10	118.49	63.17	89.59	AT3G63190	GO:0005507,copper ion binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0009793,embryo development ending in seed dormancy; GO:0032544,plastid translation; GO:0043023,ribosomal large subunit binding; GO:0050832,defense response to fungus; 	--	NP_567141.1 ribosome recycling factor, chloroplast precursor [Arabidopsis thaliana]
AT3G63210	5.62	9.10	19.60	16.43	AT3G63210	GO:0000932,P-body; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0009737,response to abscisic acid; GO:0009744,response to sucrose; GO:0009749,response to glucose; GO:0010162,seed dormancy process; GO:0010494,cytoplasmic stress granule; GO:0019900,kinase binding; GO:0046872,metal ion binding; GO:1905582,response to mannose; 	--	NP_567143.1 mediator of aba-regulated dormancy protein (DUF581) [Arabidopsis thaliana]
AT3G63400	12.58	14.43	19.90	25.32	AT3G63400	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005737,cytoplasm; GO:0006457,protein folding; GO:0008380,RNA splicing; GO:0016018,cyclosporin A binding; GO:0016607,nuclear speck; GO:0016853,isomerase activity; 	--	NP_001190169.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT3G63410	225.77	212.18	367.64	377.51	AT3G63410	GO:0005515,protein binding; GO:0005829,cytosol; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009507,chloroplast; GO:0009528,plastid inner membrane; GO:0009536,plastid; GO:0009706,chloroplast inner membrane; GO:0009941,chloroplast envelope; GO:0010189,vitamin E biosynthetic process; GO:0010236,plastoquinone biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; GO:0051741,2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; GO:0051742,2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity; GO:0071704,organic substance metabolic process; GO:0102550,2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity; 	VTE3, APG1; MPBQ/MSBQ methyltransferase [EC:2.1.1.295]; K12502; 	NP_191900.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT3G63420	10.68	12.35	32.37	22.89	AT3G63420	GO:0000139,Golgi membrane; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005834,heterotrimeric G-protein complex; GO:0005886,plasma membrane; GO:0006952,defense response; GO:0007165,signal transduction; GO:0007186,G protein-coupled receptor signaling pathway; GO:0009845,seed germination; GO:0010541,acropetal auxin transport; GO:0016020,membrane; GO:0018342,protein prenylation; GO:0018345,protein palmitoylation; GO:0048527,lateral root development; GO:0050832,defense response to fungus; 	--	NP_001325615.1 Ggamma-subunit 1 [Arabidopsis thaliana]
AT4G00040	83.15	74.49	20.11	46.08	AT4G00040	GO:0005783,endoplasmic reticulum; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009813,flavonoid biosynthetic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0030639,polyketide biosynthetic process; 	--	NP_191915.1 Chalcone and stilbene synthase family protein [Arabidopsis thaliana]
AT4G00350	12.08	10.12	4.97	4.53	AT4G00350	GO:0015297,antiporter activity; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0042910,xenobiotic transmembrane transporter activity; GO:0055085,transmembrane transport; GO:1990961,xenobiotic detoxification by transmembrane export across the plasma membrane; 	--	NP_567173.3 MATE efflux family protein [Arabidopsis thaliana]
AT4G00355	24.91	30.59	66.04	73.61	AT4G00355	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006914,autophagy; GO:0015031,protein transport; GO:0016020,membrane; GO:0043231,intracellular membrane-bounded organelle; GO:0061912,selective autophagy; 	--	NP_567174.1 mesoderm induction early response protein [Arabidopsis thaliana]
AT4G01130	16.42	14.97	28.48	25.21	AT4G01130	GO:0005576,extracellular region; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0016042,lipid catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; 	--	NP_001329403.1 GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]
AT4G01310	285.96	260.77	144.13	152.30	AT4G01310	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L5, MRPL5, rplE; large subunit ribosomal protein L5; K02931; 	NP_192040.1 Ribosomal L5P family protein [Arabidopsis thaliana]
AT4G01560	20.89	28.94	53.30	58.01	AT4G01560	GO:0000460,maturation of 5.8S rRNA; GO:0000470,maturation of LSU-rRNA; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009793,embryo development ending in seed dormancy; GO:0019843,rRNA binding; GO:0030687,preribosome, large subunit precursor; GO:0042134,rRNA primary transcript binding; 	--	NP_567213.1 Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
AT4G01650	34.42	36.99	13.95	24.07	AT4G01650	GO:0008150,biological_process; GO:0009507,chloroplast; 	--	NP_192074.1 Polyketide cyclase / dehydrase and lipid transport protein [Arabidopsis thaliana]
AT4G01710	14.09	13.55	38.90	34.79	AT4G01710	GO:0003779,actin binding; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005885,Arp2/3 protein complex; GO:0007015,actin filament organization; GO:0009825,multidimensional cell growth; GO:0010090,trichome morphogenesis; GO:0015629,actin cytoskeleton; GO:0030036,actin cytoskeleton organization; GO:0030041,actin filament polymerization; GO:0030833,regulation of actin filament polymerization; GO:0034314,Arp2/3 complex-mediated actin nucleation; GO:0042995,cell projection; GO:0051015,actin filament binding; 	ARPC5; actin related protein 2/3 complex, subunit 5; K05754; 	NP_567216.1 ARP2/3 complex 16 kDa subunit (p16-Arc) [Arabidopsis thaliana]
AT4G01880	5.32	4.52	7.16	16.51	AT4G01880	GO:0008033,tRNA processing; GO:0008168,methyltransferase activity; GO:0008175,tRNA methyltransferase activity; GO:0016740,transferase activity; GO:0030488,tRNA methylation; GO:0032259,methylation; GO:0046872,metal ion binding; GO:0106050,tRNA 2'-O-methyltransferase activity; 	--	NP_192097.2 methyltransferase [Arabidopsis thaliana]
AT4G01920	2.13	2.87	10.75	4.17	AT4G01920	GO:0003674,molecular_function; GO:0005575,cellular_component; 	--	NP_192101.1 Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]
AT4G01940	135.66	133.19	73.70	92.25	AT4G01940	GO:0005198,structural molecule activity; GO:0005506,iron ion binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016226,iron-sulfur cluster assembly; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0097428,protein maturation by iron-sulfur cluster transfer; 	--	NP_567219.1 NFU domain protein 1 [Arabidopsis thaliana]
AT4G02050	24.77	22.54	13.57	13.50	AT4G02050	GO:0005886,plasma membrane; GO:0008643,carbohydrate transport; GO:0012505,endomembrane system; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0042882,L-arabinose transmembrane transport; GO:0042900,arabinose transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0090406,pollen tube; 	--	KAG7614830.1 Sugar/inositol transporter [Arabidopsis thaliana x Arabidopsis arenosa]
AT4G02150	29.87	35.41	51.67	47.72	AT4G02150	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006606,protein import into nucleus; GO:0006607,NLS-bearing protein import into nucleus; GO:0006952,defense response; GO:0008139,nuclear localization sequence binding; GO:0015031,protein transport; GO:0061608,nuclear import signal receptor activity; 	KPNA5_6; importin subunit alpha-6/7; K15042; 	NP_192124.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT4G02250	221.19	223.92	132.74	148.20	AT4G02250	GO:0004857,enzyme inhibitor activity; GO:0030599,pectinesterase activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_192134.2 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT4G02400	12.41	13.84	29.17	22.13	AT4G02400	GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:1990904,ribonucleoprotein complex; 	UTP14; U3 small nucleolar RNA-associated protein 14; K14567; 	NP_567232.3 U3 ribonucleoprotein (Utp) family protein [Arabidopsis thaliana]
AT4G02530	71.65	75.75	45.52	40.86	AT4G02530	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010206,photosystem II repair; GO:0016020,membrane; GO:0031977,thylakoid lumen; 	--	NP_001319849.1 chloroplast thylakoid lumen protein [Arabidopsis thaliana]
AT4G02620	159.22	115.11	233.68	210.74	AT4G02620	GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0016020,membrane; GO:0033180,proton-transporting V-type ATPase, V1 domain; GO:0034220,ion transmembrane transport; GO:0046961,proton-transporting ATPase activity, rotational mechanism; GO:1902600,proton transmembrane transport; 	ATPeV1F, ATP6S14; V-type H+-transporting ATPase subunit F; K02151; 	NP_192171.1 vacuolar ATPase subunit F family protein [Arabidopsis thaliana]
AT4G02735	6.66	3.20	17.40	15.04	AT4G02735	GO:0005515,protein binding; GO:0019005,SCF ubiquitin ligase complex; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; 	--	NP_001328771.1 F-box SKIP17-like protein [Arabidopsis thaliana]
AT4G02900	0.49	0.98	2.57	4.21	AT4G02900	GO:0005227,calcium activated cation channel activity; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0008150,biological_process; GO:0016020,membrane; GO:0034220,ion transmembrane transport; GO:0098655,cation transmembrane transport; 	--	NP_001328397.1 ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]
AT4G03260	3.92	3.04	12.77	9.17	AT4G03260	GO:0000226,microtubule cytoskeleton organization; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0008017,microtubule binding; GO:0009819,drought recovery; GO:0019901,protein kinase binding; GO:0045926,negative regulation of growth; GO:0046777,protein autophosphorylation; 	--	NP_001118925.1 Outer arm dynein light chain 1 protein [Arabidopsis thaliana]
AT4G03280	464.50	515.38	323.27	289.21	AT4G03280	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005743,mitochondrial inner membrane; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009496,plastoquinol--plastocyanin reductase activity; GO:0009507,chloroplast; GO:0009512,cytochrome b6f complex; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009767,photosynthetic electron transport chain; GO:0009941,chloroplast envelope; GO:0010196,nonphotochemical quenching; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0043229,intracellular organelle; GO:0045158,electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; GO:0046028,electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0055085,transmembrane transport; 	petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]; K02636; 	NP_192237.1 photosynthetic electron transfer C [Arabidopsis thaliana]
AT4G03520	547.51	508.13	401.21	302.35	AT4G03520	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008047,enzyme activator activity; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0015035,protein-disulfide reductase activity; GO:0016491,oxidoreductase activity; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0043085,positive regulation of catalytic activity; 	trxA; thioredoxin 1; K03671; 	NP_192261.1 Thioredoxin superfamily protein [Arabidopsis thaliana]
AT4G04020	206.38	195.35	138.58	128.29	AT4G04020	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005829,cytosol; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009737,response to abscisic acid; GO:0010205,photoinhibition; GO:0010287,plastoglobule; GO:0010319,stromule; GO:0031977,thylakoid lumen; 	--	NP_192311.1 fibrillin [Arabidopsis thaliana]
AT4G04460	689.06	665.60	372.81	350.57	AT4G04460	GO:0004190,aspartic-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0006629,lipid metabolic process; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0046686,response to cadmium ion; 	--	NP_001190671.1 Saposin-like aspartyl protease family protein [Arabidopsis thaliana]
AT4G04640	788.27	690.12	463.46	496.06	AT4G04640	GO:0000275,mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1); GO:0005515,protein binding; GO:0005829,cytosol; GO:0006754,ATP biosynthetic process; GO:0006811,ion transport; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009544,chloroplast ATP synthase complex; GO:0009579,thylakoid; GO:0009772,photosynthetic electron transport in photosystem II; GO:0009941,chloroplast envelope; GO:0015986,proton motive force-driven ATP synthesis; GO:0016020,membrane; GO:0030234,enzyme regulator activity; GO:0045261,proton-transporting ATP synthase complex, catalytic core F(1); GO:0046933,proton-transporting ATP synthase activity, rotational mechanism; GO:0050790,regulation of catalytic activity; GO:0110165,cellular anatomical entity; GO:1902600,proton transmembrane transport; 	ATPF1G, atpG; F-type H+-transporting ATPase subunit gamma; K02115; 	NP_567265.1 ATPase, F1 complex, gamma subunit protein [Arabidopsis thaliana]
AT4G04940	17.75	14.98	30.87	30.48	AT4G04940	GO:0005515,protein binding; GO:0005634,nucleus; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:0034388,Pwp2p-containing subcomplex of 90S preribosome; GO:0110165,cellular anatomical entity; 	UTP21, WDR36; U3 small nucleolar RNA-associated protein 21; K14554; 	NP_567275.1 transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT4G05180	758.99	724.21	398.80	400.01	AT4G05180	GO:0005509,calcium ion binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009654,photosystem II oxygen evolving complex; GO:0009767,photosynthetic electron transport chain; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0031977,thylakoid lumen; GO:0045156,electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; GO:0048046,apoplast; 	psbQ; photosystem II oxygen-evolving enhancer protein 3; K08901; 	NP_001319873.1 photosystem II subunit Q-2 [Arabidopsis thaliana]
AT4G05380	0.00	0.19	3.17	0.31	AT4G05380	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0006950,response to stress; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_001319874.1 P-loop nucleoside triphosphate hydrolase superfamily protein [Arabidopsis thaliana]
AT4G06599	11.68	13.09	23.09	24.60	AT4G06599	GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0008150,biological_process; GO:0016787,hydrolase activity; GO:0017018,myosin phosphatase activity; 	--	NP_849320.1 ubiquitin family protein [Arabidopsis thaliana]
AT4G06746	0.00	0.00	9.68	3.83	AT4G06746	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009873,ethylene-activated signaling pathway; 	--	NP_849340.1 related to AP2 9 [Arabidopsis thaliana]
AT4G07410	23.45	21.88	40.25	29.24	AT4G07410	GO:0005515,protein binding; GO:0005634,nucleus; GO:0009793,embryo development ending in seed dormancy; GO:0010073,meristem maintenance; GO:0010305,leaf vascular tissue pattern formation; GO:0010311,lateral root formation; GO:0010449,root meristem growth; GO:0035266,meristem growth; GO:0048366,leaf development; GO:0090696,post-embryonic plant organ development; GO:2000012,regulation of auxin polar transport; 	UTP4, CIRH1A; U3 small nucleolar RNA-associated protein 4; K14548; 	NP_567317.2 Transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT4G08455	5.48	10.77	17.43	26.68	AT4G08455	GO:0005515,protein binding; GO:0016567,protein ubiquitination; 	SPOP; speckle-type POZ protein; K10523; 	NP_680660.3 BTB/POZ domain-containing protein [Arabidopsis thaliana]
AT4G08670	51.19	43.53	24.22	16.61	AT4G08670	GO:0005886,plasma membrane; GO:0006869,lipid transport; GO:0008289,lipid binding; GO:0016020,membrane; 	--	KAG7615320.1 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain [Arabidopsis thaliana x Arabidopsis arenosa]
AT4G09000	388.28	417.61	273.98	271.08	AT4G09000	GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0007165,signal transduction; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0016020,membrane; GO:0019222,regulation of metabolic process; GO:0045309,protein phosphorylated amino acid binding; GO:0048046,apoplast; 	YWHAE; 14-3-3 protein epsilon; K06630; 	NP_001154216.1 general regulatory factor 1 [Arabidopsis thaliana]
AT4G09010	60.20	57.30	28.05	34.60	AT4G09010	GO:0000302,response to reactive oxygen species; GO:0004601,peroxidase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006979,response to oxidative stress; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0031977,thylakoid lumen; GO:0034599,cellular response to oxidative stress; GO:0042744,hydrogen peroxide catabolic process; GO:0098869,cellular oxidant detoxification; 	E1.11.1.11; L-ascorbate peroxidase [EC:1.11.1.11]; K00434; 	NP_192640.1 ascorbate peroxidase 4 [Arabidopsis thaliana]
AT4G09040	54.54	47.00	32.82	34.61	AT4G09040	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:1990904,ribonucleoprotein complex; 	--	BAD43393.1 putative protein [Arabidopsis thaliana]
AT4G09550	119.31	141.87	292.14	247.03	AT4G09550	GO:0000226,microtubule cytoskeleton organization; GO:0000776,kinetochore; GO:0000930,gamma-tubulin complex; GO:0000931,gamma-tubulin ring complex; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005640,nuclear outer membrane; GO:0005737,cytoplasm; GO:0005819,spindle; GO:0005828,kinetochore microtubule; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0007052,mitotic spindle organization; GO:0009524,phragmoplast; GO:0009574,preprophase band; GO:0031021,interphase microtubule organizing center; GO:0033566,gamma-tubulin complex localization; GO:0034080,CENP-A containing chromatin assembly; GO:0034508,centromere complex assembly; GO:0042393,histone binding; GO:0051415,microtubule nucleation by interphase microtubule organizing center; GO:0051418,microtubule nucleation by microtubule organizing center; GO:0072686,mitotic spindle; GO:0090307,mitotic spindle assembly; 	--	NP_001328567.1 AtGCP3 interacting protein 1 [Arabidopsis thaliana]
AT4G09650	311.72	326.54	155.56	164.29	AT4G09650	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0006754,ATP biosynthetic process; GO:0006811,ion transport; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009772,photosynthetic electron transport in photosystem II; GO:0009773,photosynthetic electron transport in photosystem I; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0010319,stromule; GO:0015979,photosynthesis; GO:0015986,proton motive force-driven ATP synthesis; GO:0016020,membrane; GO:0045261,proton-transporting ATP synthase complex, catalytic core F(1); GO:0046933,proton-transporting ATP synthase activity, rotational mechanism; GO:0110165,cellular anatomical entity; GO:1902600,proton transmembrane transport; 	ATPF1D, atpH; F-type H+-transporting ATPase subunit delta; K02113; 	NP_192703.1 F-type H+-transporting ATPase subunit delta [Arabidopsis thaliana]
AT4G10450	171.81	151.99	316.60	288.50	AT4G10450	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L9e, RPL9; large subunit ribosomal protein L9e; K02940; 	NP_192783.1 Ribosomal protein L6 family [Arabidopsis thaliana]
AT4G11080	20.27	18.05	8.30	13.59	AT4G11080	GO:0000793,condensed chromosome; GO:0000794,condensed nuclear chromosome; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_192846.1 HMG (high mobility group) box protein [Arabidopsis thaliana]
AT4G11190	0.84	0.00	7.30	6.25	AT4G11190	GO:0005576,extracellular region; GO:0009699,phenylpropanoid biosynthetic process; GO:0048046,apoplast; 	--	NP_192858.1 Disease resistance-responsive (dirigent-like protein) family protein [Arabidopsis thaliana]
AT4G11290	19.58	12.86	31.99	36.26	AT4G11290	GO:0004601,peroxidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0006979,response to oxidative stress; GO:0009505,plant-type cell wall; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0042744,hydrogen peroxide catabolic process; GO:0046872,metal ion binding; GO:0098869,cellular oxidant detoxification; GO:0099503,secretory vesicle; GO:0140825,lactoperoxidase activity; 	E1.11.1.7; peroxidase [EC:1.11.1.7]; K00430; 	NP_192868.1 Peroxidase superfamily protein [Arabidopsis thaliana]
AT4G11530	0.12	0.25	1.50	1.71	AT4G11530	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; 	--	NP_001319904.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 34 [Arabidopsis thaliana]
AT4G11570	53.87	64.95	28.27	28.22	AT4G11570	GO:0006468,protein phosphorylation; GO:0009231,riboflavin biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0043621,protein self-association; GO:0043726,5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity; 	PYRP2; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]; K22912; 	NP_192894.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]
AT4G11820	114.61	130.24	81.56	65.10	AT4G11820	GO:0004421,hydroxymethylglutaryl-CoA synthase activity; GO:0006084,acetyl-CoA metabolic process; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0009506,plasmodesma; GO:0010142,farnesyl diphosphate biosynthetic process, mevalonate pathway; GO:0016126,sterol biosynthetic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019287,isopentenyl diphosphate biosynthetic process, mevalonate pathway; 	E2.3.3.10; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]; K01641; 	NP_192919.1 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase [Arabidopsis thaliana]
AT4G12080	2.63	1.92	12.29	9.32	AT4G12080	GO:0003677,DNA binding; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0043565,sequence-specific DNA binding; GO:0098687,chromosomal region; 	--	NP_192945.2 AT-hook motif nuclear-localized protein 1 [Arabidopsis thaliana]
AT4G12400	9.47	19.91	2.17	1.78	AT4G12400	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006457,protein folding; GO:0010286,heat acclimation; GO:0030544,Hsp70 protein binding; GO:0051131,chaperone-mediated protein complex assembly; GO:0051879,Hsp90 protein binding; GO:0070678,preprotein binding; 	STIP1; stress-induced-phosphoprotein 1; K09553; 	NP_001031620.1 stress-inducible protein [Arabidopsis thaliana]
AT4G12600	129.45	132.48	269.59	238.13	AT4G12600	GO:0000398,mRNA splicing, via spliceosome; GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0030490,maturation of SSU-rRNA; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:0046540,U4/U6 x U5 tri-snRNP complex; GO:0071011,precatalytic spliceosome; GO:1990904,ribonucleoprotein complex; 	SNU13, NHP2L; U4/U6 small nuclear ribonucleoprotein SNU13; K12845; 	NP_192997.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT4G12870	188.45	167.57	292.94	252.74	AT4G12870	GO:0016491,oxidoreductase activity; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; 	--	NP_193023.2 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein [Arabidopsis thaliana]
AT4G13170	157.70	125.23	255.94	272.44	AT4G13170	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0015934,large ribosomal subunit; GO:0017148,negative regulation of translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L13Ae, RPL13A; large subunit ribosomal protein L13Ae; K02872; 	NP_193053.1 Ribosomal protein L13 family protein [Arabidopsis thaliana]
AT4G13270	32.18	38.55	15.62	14.06	AT4G13270	GO:0016020,membrane; 	--	NP_193063.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT4G13720	15.26	14.44	26.59	31.55	AT4G13720	GO:0000166,nucleotide binding; GO:0005737,cytoplasm; GO:0009117,nucleotide metabolic process; GO:0009143,nucleoside triphosphate catabolic process; GO:0009204,deoxyribonucleoside triphosphate catabolic process; GO:0016787,hydrolase activity; GO:0035870,dITP diphosphatase activity; GO:0036220,ITP diphosphatase activity; GO:0036222,XTP diphosphatase activity; GO:0046872,metal ion binding; GO:0047429,nucleoside triphosphate diphosphatase activity; 	ITPA; inosine triphosphate pyrophosphatase [EC:3.6.1.-]; K01519; 	NP_001328955.1 Inosine triphosphate pyrophosphatase family protein [Arabidopsis thaliana]
AT4G13750	1.83	1.82	4.12	3.87	AT4G13750	GO:0001708,cell fate specification; GO:0005634,nucleus; GO:0009793,embryo development ending in seed dormancy; GO:0009926,auxin polar transport; GO:0010305,leaf vascular tissue pattern formation; GO:0019827,stem cell population maintenance; GO:0048364,root development; 	--	NP_193111.2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis thaliana]
AT4G13770	14.44	13.48	25.05	22.71	AT4G13770	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005829,cytosol; GO:0009625,response to insect; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0019761,glucosinolate biosynthetic process; GO:0020037,heme binding; GO:0046872,metal ion binding; 	CYP83A1; (methylthio)alkanaldoxime N-monooxygenase [EC:1.14.14.43]; K12156; 	NP_193113.1 cytochrome P450, family 83, subfamily A, polypeptide 1 [Arabidopsis thaliana]
AT4G13970	3.81	5.62	9.82	9.47	AT4G13970	GO:0008270,zinc ion binding; 	--	NP_193133.3 zinc ion binding protein [Arabidopsis thaliana]
AT4G14040	20.96	27.62	34.57	40.30	AT4G14040	GO:0005829,cytosol; GO:0008430,selenium binding; GO:0010197,polar nucleus fusion; 	SELENBP1; methanethiol oxidase [EC:1.8.3.4]; K17285; 	NP_193140.1 selenium-binding protein 2 [Arabidopsis thaliana]
AT4G14080	211.95	194.25	99.80	99.32	AT4G14080	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0006952,defense response; GO:0008152,metabolic process; GO:0009793,embryo development ending in seed dormancy; GO:0010584,pollen exine formation; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; 	--	NP_193144.1 O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
AT4G14320	592.01	646.58	1108.28	1034.94	AT4G14320	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L44e, RPL44; large subunit ribosomal protein L44e; K02929; 	NP_001190728.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT4G14520	7.77	6.83	24.06	15.83	AT4G14520	GO:0000428,DNA-directed RNA polymerase complex; GO:0003697,single-stranded DNA binding; GO:0003727,single-stranded RNA binding; GO:0005634,nucleus; GO:0006352,DNA-templated transcription initiation; 	--	NP_001190729.1 DNA-directed RNA polymerase II-like protein [Arabidopsis thaliana]
AT4G14540	45.32	51.40	97.21	70.52	AT4G14540	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001228,DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009408,response to heat; GO:0009414,response to water deprivation; GO:0016602,CCAAT-binding factor complex; GO:0043565,sequence-specific DNA binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0046982,protein heterodimerization activity; 	NFYB, HAP3; nuclear transcription Y subunit beta; K08065; 	NP_193190.1 nuclear factor Y, subunit B3 [Arabidopsis thaliana]
AT4G14716	117.35	107.18	66.44	80.17	AT4G14716	GO:0005506,iron ion binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006555,methionine metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009086,methionine biosynthetic process; GO:0010308,acireductone dioxygenase (Ni2+-requiring) activity; GO:0010309,acireductone dioxygenase [iron(II)-requiring] activity; GO:0016151,nickel cation binding; GO:0016491,oxidoreductase activity; GO:0019509,L-methionine salvage from methylthioadenosine; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; GO:0051302,regulation of cell division; 	mtnD, mtnZ, ADI1; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]; K08967; 	NP_567443.1 acireductone dioxygenase 1 [Arabidopsis thaliana]
AT4G14880	240.33	210.73	120.49	141.92	AT4G14880	GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0004124,cysteine synthase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006535,cysteine biosynthetic process from serine; GO:0007568,aging; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009567,double fertilization forming a zygote and endosperm; GO:0009570,chloroplast stroma; GO:0009860,pollen tube growth; GO:0016740,transferase activity; GO:0019344,cysteine biosynthetic process; GO:0046686,response to cadmium ion; GO:0048046,apoplast; 	cysK; cysteine synthase [EC:2.5.1.47]; K01738; 	NP_001190732.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1 [Arabidopsis thaliana]
AT4G15120	4.43	6.64	0.58	0.00	AT4G15120	--	--	NP_567458.1 VQ motif-containing protein [Arabidopsis thaliana]
AT4G15470	297.50	258.84	186.01	177.24	AT4G15470	GO:0016020,membrane; 	TMBIM, LFG; protein lifeguard; K24205; 	NP_567466.1 Bax inhibitor-1 family protein [Arabidopsis thaliana]
AT4G15530	52.58	61.07	31.76	42.77	AT4G15530	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006090,pyruvate metabolic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0015979,photosynthesis; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0043231,intracellular membrane-bounded organelle; GO:0046872,metal ion binding; GO:0050242,pyruvate, phosphate dikinase activity; 	ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]; K01006; 	NP_193288.2 pyruvate orthophosphate dikinase [Arabidopsis thaliana]
AT4G15550	25.65	22.05	12.79	13.70	AT4G15550	GO:0008194,UDP-glycosyltransferase activity; GO:0009636,response to toxic substance; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; 	--	NP_567471.1 indole-3-acetate beta-D-glucosyltransferase [Arabidopsis thaliana]
AT4G15730	1.11	0.49	5.62	3.14	AT4G15730	GO:0008270,zinc ion binding; GO:0009506,plasmodesma; GO:0046872,metal ion binding; 	--	NP_193308.2 CW-type Zinc Finger [Arabidopsis thaliana]
AT4G15750	98.53	101.80	58.86	26.06	AT4G15750	GO:0004857,enzyme inhibitor activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_567474.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT4G15770	94.71	85.84	138.81	160.76	AT4G15770	GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042255,ribosome assembly; GO:0042273,ribosomal large subunit biogenesis; 	--	NP_193312.5 RNA binding protein [Arabidopsis thaliana]
AT4G15880	23.81	22.68	39.55	31.15	AT4G15880	GO:0005634,nucleus; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0009909,regulation of flower development; GO:0009911,positive regulation of flower development; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016926,protein desumoylation; GO:0016929,deSUMOylase activity; GO:0019900,kinase binding; GO:0031965,nuclear membrane; GO:0070139,SUMO-specific endopeptidase activity; 	--	NP_001328371.1 Cysteine proteinases superfamily protein [Arabidopsis thaliana]
AT4G15910	12.64	8.17	40.71	46.82	AT4G15910	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009631,cold acclimation; GO:0009737,response to abscisic acid; 	--	NP_193326.4 drought-induced 21 [Arabidopsis thaliana]
AT4G15920	44.53	33.70	25.10	17.93	AT4G15920	GO:0016021,integral component of membrane; 	--	NP_193327.5 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT4G16000	32.11	15.26	7.50	0.00	AT4G16000	GO:0008150,biological_process; 	--	NP_567481.1 hypothetical protein AT4G16000 [Arabidopsis thaliana]
AT4G16143	240.12	229.32	372.28	397.66	AT4G16143	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006606,protein import into nucleus; GO:0006607,NLS-bearing protein import into nucleus; GO:0008139,nuclear localization sequence binding; GO:0009506,plasmodesma; GO:0015031,protein transport; GO:0061608,nuclear import signal receptor activity; 	--	NP_001154239.1 importin alpha isoform 2 [Arabidopsis thaliana]
AT4G16190	998.97	1004.55	601.21	622.88	AT4G16190	GO:0000323,lytic vacuole; GO:0000325,plant-type vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0005615,extracellular space; GO:0005764,lysosome; GO:0005773,vacuole; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0051603,proteolysis involved in protein catabolic process; 	CTSF; cathepsin F [EC:3.4.22.41]; K01373; 	NP_567489.1 Papain family cysteine protease [Arabidopsis thaliana]
AT4G16210	64.59	62.28	29.18	42.95	AT4G16210	GO:0003824,catalytic activity; GO:0004300,enoyl-CoA hydratase activity; GO:0005777,peroxisome; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006635,fatty acid beta-oxidation; GO:0016829,lyase activity; 	paaF, echA; enoyl-CoA hydratase [EC:4.2.1.17]; K01692; 	NP_193356.2 enoyl-CoA hydratase/isomerase A [Arabidopsis thaliana]
AT4G16480	34.29	26.50	18.33	17.61	AT4G16480	GO:0005366,myo-inositol:proton symporter activity; GO:0005886,plasma membrane; GO:0015293,symporter activity; GO:0015798,myo-inositol transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_001328028.1 inositol transporter 4 [Arabidopsis thaliana]
AT4G16500	231.64	176.76	104.86	112.74	AT4G16500	GO:0000325,plant-type vacuole; GO:0004869,cysteine-type endopeptidase inhibitor activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005829,cytosol; GO:0006952,defense response; GO:0009506,plasmodesma; GO:0010466,negative regulation of peptidase activity; GO:0010951,negative regulation of endopeptidase activity; GO:0030414,peptidase inhibitor activity; GO:0099503,secretory vesicle; 	--	NP_001319960.1 Cystatin/monellin superfamily protein [Arabidopsis thaliana]
AT4G16563	18.12	12.02	23.40	28.05	AT4G16563	GO:0003674,molecular_function; GO:0004190,aspartic-type endopeptidase activity; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0009505,plant-type cell wall; GO:0016787,hydrolase activity; 	--	NP_567506.1 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT4G16630	29.06	21.30	46.70	48.14	AT4G16630	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_193396.3 DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
AT4G16650	16.61	16.07	24.34	26.55	AT4G16650	GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0005975,carbohydrate metabolic process; GO:0006004,fucose metabolic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; 	--	NP_001319965.1 O-fucosyltransferase family protein [Arabidopsis thaliana]
AT4G16980	44.96	40.06	21.13	16.65	AT4G16980	--	--	NP_193431.2 arabinogalactan-protein family [Arabidopsis thaliana]
AT4G17340	22.71	20.52	9.41	9.22	AT4G17340	GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0006833,water transport; GO:0009705,plant-type vacuole membrane; GO:0015250,water channel activity; GO:0015267,channel activity; GO:0016020,membrane; GO:0042807,central vacuole; GO:0055085,transmembrane transport; 	--	NP_193465.1 tonoplast intrinsic protein 2;2 [Arabidopsis thaliana]
AT4G17390	748.97	838.25	1312.48	1307.08	AT4G17390	GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L15e, RPL15; large subunit ribosomal protein L15e; K02877; 	NP_193470.1 Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]
AT4G17470	0.51	0.00	5.46	13.10	AT4G17470	GO:0016787,hydrolase activity; GO:0016790,thiolester hydrolase activity; GO:0043231,intracellular membrane-bounded organelle; GO:0098599,palmitoyl hydrolase activity; GO:0098734,macromolecule depalmitoylation; 	PPT; palmitoyl-protein thioesterase [EC:3.1.2.22]; K01074; 	NP_001190752.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT4G17483	4.41	5.42	30.64	12.49	AT4G17483	GO:0016790,thiolester hydrolase activity; GO:0043231,intracellular membrane-bounded organelle; 	PPT; palmitoyl-protein thioesterase [EC:3.1.2.22]; K01074; 	NP_001328380.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT4G17560	57.71	58.49	24.39	39.03	AT4G17560	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L19, MRPL19, rplS; large subunit ribosomal protein L19; K02884; 	NP_567531.1 Ribosomal protein L19 family protein [Arabidopsis thaliana]
AT4G17590	0.00	0.00	3.90	1.43	AT4G17590	GO:0000470,maturation of LSU-rRNA; GO:0001510,RNA methylation; GO:0005730,nucleolus; GO:0008168,methyltransferase activity; GO:0009383,rRNA (cytosine-C5-)-methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0070475,rRNA base methylation; 	--	NP_001154249.1 NOL1/NOP2/sun family protein [Arabidopsis thaliana]
AT4G17600	88.19	73.76	43.62	50.03	AT4G17600	GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005829,cytosol; GO:0006355,regulation of DNA-templated transcription; GO:0009503,thylakoid light-harvesting complex; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019899,enzyme binding; GO:0042651,thylakoid membrane; GO:0042802,identical protein binding; GO:0043495,protein-membrane adaptor activity; GO:1902326,positive regulation of chlorophyll biosynthetic process; GO:1904964,positive regulation of phytol biosynthetic process; GO:1904966,positive regulation of vitamin E biosynthetic process; 	--	NP_567532.1 Chlorophyll A-B binding family protein [Arabidopsis thaliana]
AT4G17940	49.70	42.76	28.63	26.29	AT4G17940	GO:0003674,molecular_function; GO:0005515,protein binding; 	--	NP_567545.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT4G17950	34.79	30.43	54.45	50.94	AT4G17950	GO:0003677,DNA binding; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005634,nucleus; 	--	NP_567546.1 AT hook motif DNA-binding family protein [Arabidopsis thaliana]
AT4G17970	1.11	0.61	2.01	5.16	AT4G17970	GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0008272,sulfate transport; GO:0008509,anion transmembrane transporter activity; GO:0009705,plant-type vacuole membrane; GO:0010118,stomatal movement; GO:0012505,endomembrane system; GO:0015743,malate transport; GO:0016020,membrane; GO:0098656,anion transmembrane transport; 	--	NP_193531.1 aluminum-activated, malate transporter 12 [Arabidopsis thaliana]
AT4G18020	11.14	7.85	3.91	5.29	AT4G18020	GO:0000160,phosphorelay signal transduction system; GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0045893,positive regulation of DNA-templated transcription; 	--	NP_001190759.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]
AT4G18190	10.06	7.30	3.48	1.49	AT4G18190	GO:0005345,purine nucleobase transmembrane transporter activity; GO:0006863,purine nucleobase transport; GO:0015211,purine nucleoside transmembrane transporter activity; GO:0015860,purine nucleoside transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:1904823,purine nucleobase transmembrane transport; 	--	NP_193553.2 purine permease 6 [Arabidopsis thaliana]
AT4G18197	2.60	1.54	6.62	6.29	AT4G18197	GO:0005345,purine nucleobase transmembrane transporter activity; GO:0006863,purine nucleobase transport; GO:0015211,purine nucleoside transmembrane transporter activity; GO:0015860,purine nucleoside transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:1904823,purine nucleobase transmembrane transport; 	--	NP_001031663.1 purine permease 7 [Arabidopsis thaliana]
AT4G18230	42.91	50.62	84.88	102.23	AT4G18230	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0006488,dolichol-linked oligosaccharide biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0031965,nuclear membrane; GO:0043541,UDP-N-acetylglucosamine transferase complex; 	ALG14; beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]; K07441; 	NP_001328332.1 UDP-N-acetylglucosamine transferase subunit ALG14-like protein [Arabidopsis thaliana]
AT4G18350	8.42	5.73	10.98	17.09	AT4G18350	GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009688,abscisic acid biosynthetic process; GO:0010436,carotenoid dioxygenase activity; GO:0016121,carotene catabolic process; GO:0016491,oxidoreductase activity; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0045549,9-cis-epoxycarotenoid dioxygenase activity; GO:0046872,metal ion binding; GO:0051213,dioxygenase activity; 	NCED; 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]; K09840; 	NP_193569.1 nine-cis-epoxycarotenoid dioxygenase 2 [Arabidopsis thaliana]
AT4G18540	5.66	4.58	27.03	8.55	AT4G18540	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_001329805.1 transmembrane protein [Arabidopsis thaliana]
AT4G18593	63.90	63.63	106.98	128.42	AT4G18593	GO:0006470,protein dephosphorylation; GO:0008138,protein tyrosine/serine/threonine phosphatase activity; 	--	NP_001328432.1 dual specificity protein phosphatase-like protein [Arabidopsis thaliana]
AT4G18710	71.57	78.45	136.80	124.00	AT4G18710	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0005938,cell cortex; GO:0006468,protein phosphorylation; GO:0007165,signal transduction; GO:0009729,detection of brassinosteroid stimulus; GO:0009733,response to auxin; GO:0009742,brassinosteroid mediated signaling pathway; GO:0009825,multidimensional cell growth; GO:0009965,leaf morphogenesis; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0042802,identical protein binding; GO:0046777,protein autophosphorylation; GO:0046827,positive regulation of protein export from nucleus; GO:0048765,root hair cell differentiation; GO:0106310,protein serine kinase activity; GO:1900458,negative regulation of brassinosteroid mediated signaling pathway; 	BIN2; protein brassinosteroid insensitive 2 [EC:2.7.11.1]; K14502; 	NP_193606.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT4G18730	230.02	289.87	445.01	441.71	AT4G18730	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L11e, RPL11; large subunit ribosomal protein L11e; K02868; 	NP_191429.1 Ribosomal L5P family protein [Arabidopsis thaliana]
AT4G19000	0.38	0.21	2.72	4.19	AT4G19000	GO:0003746,translation elongation factor activity; GO:0005634,nucleus; GO:0006414,translational elongation; GO:0009742,brassinosteroid mediated signaling pathway; GO:0032784,regulation of DNA-templated transcription elongation; 	--	NP_001319989.1 Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana]
AT4G19210	81.58	99.86	148.12	146.51	AT4G19210	GO:0000054,ribosomal subunit export from nucleus; GO:0000166,nucleotide binding; GO:0005506,iron ion binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0006413,translational initiation; GO:0006415,translational termination; GO:0016020,membrane; GO:0043024,ribosomal small subunit binding; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; 	--	NP_193656.2 RNAse l inhibitor protein 2 [Arabidopsis thaliana]
AT4G19610	9.75	9.88	18.17	18.94	AT4G19610	GO:0000398,mRNA splicing, via spliceosome; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005730,nucleolus; GO:0016607,nuclear speck; 	--	NP_193696.3 nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
AT4G19840	55.96	70.89	38.71	46.84	AT4G19840	GO:0009625,response to insect; GO:0030246,carbohydrate binding; GO:0043394,proteoglycan binding; 	--	NP_193719.1 phloem protein 2-A1 [Arabidopsis thaliana]
AT4G19865	11.50	19.17	6.00	4.40	AT4G19865	GO:0003674,molecular_function; GO:0005515,protein binding; 	--	NP_849411.1 Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]
AT4G20050	85.18	99.72	34.83	33.94	AT4G20050	GO:0004650,polygalacturonase activity; GO:0005576,extracellular region; GO:0008152,metabolic process; GO:0009556,microsporogenesis; GO:0010584,pollen exine formation; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016829,lyase activity; GO:0071555,cell wall organization; 	--	NP_001329638.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT4G20420	134.35	120.05	48.77	49.55	AT4G20420	GO:0008150,biological_process; 	--	NP_193775.1 Tapetum specific protein TAP35/TAP44 [Arabidopsis thaliana]
AT4G20480	29.36	23.79	42.29	45.58	AT4G20480	GO:0003674,molecular_function; GO:0004519,endonuclease activity; GO:0004540,ribonuclease activity; GO:0005777,peroxisome; GO:0010468,regulation of gene expression; GO:0016787,hydrolase activity; GO:0035194,post-transcriptional gene silencing by RNA; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090501,RNA phosphodiester bond hydrolysis; GO:1903231,mRNA base-pairing post-transcriptional repressor activity; 	--	NP_567602.1 Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
AT4G20980	85.75	75.40	138.51	158.28	AT4G20980	GO:0001732,formation of cytoplasmic translation initiation complex; GO:0002183,cytoplasmic translational initiation; GO:0002191,cap-dependent translational initiation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005852,eukaryotic translation initiation factor 3 complex; GO:0006412,translation; GO:0006413,translational initiation; GO:0016282,eukaryotic 43S preinitiation complex; GO:0033290,eukaryotic 48S preinitiation complex; GO:0098808,mRNA cap binding; 	EIF3D; translation initiation factor 3 subunit D; K03251; 	NP_001031683.1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) [Arabidopsis thaliana]
AT4G21040	18.77	35.37	3.38	8.69	AT4G21040	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0043565,sequence-specific DNA binding; GO:0046872,metal ion binding; 	--	NP_193836.1 Dof-type zinc finger domain-containing protein [Arabidopsis thaliana]
AT4G21110	64.19	51.15	106.32	92.11	AT4G21110	GO:0000398,mRNA splicing, via spliceosome; GO:0005634,nucleus; GO:0005681,spliceosomal complex; 	BUD31, G10; bud site selection protein 31; K12873; 	NP_001329615.1 G10 family protein [Arabidopsis thaliana]
AT4G21170	8.80	7.32	1.92	5.18	AT4G21170	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009536,plastid; 	--	NP_001320017.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT4G21190	4.56	4.18	16.43	10.80	AT4G21190	GO:0003674,molecular_function; GO:0005515,protein binding; 	--	NP_567622.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]
AT4G21192	11.57	9.54	31.94	33.92	AT4G21192	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0008150,biological_process; 	--	NP_001078417.1 Cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana]
AT4G21280	522.38	563.84	331.45	311.70	AT4G21280	GO:0003729,mRNA binding; GO:0005509,calcium ion binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009654,photosystem II oxygen evolving complex; GO:0009767,photosynthetic electron transport chain; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0031977,thylakoid lumen; GO:0045156,electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; 	psbQ; photosystem II oxygen-evolving enhancer protein 3; K08901; 	NP_193860.1 photosystem II subunit QA [Arabidopsis thaliana]
AT4G21380	5.13	6.85	3.83	1.02	AT4G21380	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004675,transmembrane receptor protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0005773,vacuole; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0007178,transmembrane receptor protein serine/threonine kinase signaling pathway; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0030246,carbohydrate binding; GO:0031625,ubiquitin protein ligase binding; GO:0048544,recognition of pollen; GO:0106310,protein serine kinase activity; 	--	NP_193869.1 receptor kinase 3 [Arabidopsis thaliana]
AT4G21450	35.36	41.30	70.39	49.57	AT4G21450	GO:0005515,protein binding; GO:0005789,endoplasmic reticulum membrane; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0061817,endoplasmic reticulum-plasma membrane tethering; GO:0090158,endoplasmic reticulum membrane organization; 	--	NP_567627.1 PapD-like superfamily protein [Arabidopsis thaliana]
AT4G21570	17.78	17.96	39.80	34.71	AT4G21570	GO:0005783,endoplasmic reticulum; GO:0016020,membrane; 	--	NP_193888.1 organic solute transporter ostalpha protein (DUF300) [Arabidopsis thaliana]
AT4G21590	97.42	131.23	69.40	63.23	AT4G21590	GO:0000014,single-stranded DNA endodeoxyribonuclease activity; GO:0003676,nucleic acid binding; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004521,endoribonuclease activity; GO:0006308,DNA catabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0046872,metal ion binding; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; 	E3.1.30.1; nuclease S1 [EC:3.1.30.1]; K05986; 	NP_001078420.1 endonuclease 3 [Arabidopsis thaliana]
AT4G21680	11.52	5.38	16.40	17.16	AT4G21680	GO:0005886,plasma membrane; GO:0010167,response to nitrate; GO:0015112,nitrate transmembrane transporter activity; GO:0015293,symporter activity; GO:0015706,nitrate transmembrane transport; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0042128,nitrate assimilation; GO:0046686,response to cadmium ion; GO:0055085,transmembrane transport; 	--	NP_193899.2 NITRATE TRANSPORTER 1.8 [Arabidopsis thaliana]
AT4G21810	29.01	40.99	25.25	11.21	AT4G21810	GO:0000839,Hrd1p ubiquitin ligase ERAD-L complex; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006950,response to stress; GO:0016020,membrane; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0051787,misfolded protein binding; GO:1990381,ubiquitin-specific protease binding; 	DERL2_3; Derlin-2/3; K13989; 	NP_193912.3 DERLIN-2.1 [Arabidopsis thaliana]
AT4G22080	23.33	27.60	7.69	7.69	AT4G22080	GO:0016829,lyase activity; GO:0030570,pectate lyase activity; GO:0045490,pectin catabolic process; GO:0046872,metal ion binding; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_193939.1 root hair specific 14 [Arabidopsis thaliana]
AT4G22105	16.86	14.63	1.28	3.29	AT4G22105	GO:0005576,extracellular region; GO:0006952,defense response; GO:0007165,signal transduction; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001031693.1 SCR-like 26 [Arabidopsis thaliana]
AT4G22120	27.82	26.80	19.96	16.48	AT4G22120	GO:0005227,calcium activated cation channel activity; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008381,mechanosensitive ion channel activity; GO:0016020,membrane; GO:0034220,ion transmembrane transport; GO:0042802,identical protein binding; GO:0098655,cation transmembrane transport; 	--	NP_001078425.1 ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]
AT4G22240	930.13	914.66	562.77	581.21	AT4G22240	GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0010287,plastoglobule; GO:0031977,thylakoid lumen; 	--	NP_193955.1 Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana]
AT4G22380	58.72	63.88	109.87	107.61	AT4G22380	GO:0000398,mRNA splicing, via spliceosome; GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0030490,maturation of SSU-rRNA; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:0046540,U4/U6 x U5 tri-snRNP complex; GO:0071011,precatalytic spliceosome; GO:1990904,ribonucleoprotein complex; 	SNU13, NHP2L; U4/U6 small nuclear ribonucleoprotein SNU13; K12845; 	NP_193969.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT4G22570	115.33	120.55	198.05	173.23	AT4G22570	GO:0003999,adenine phosphoribosyltransferase activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006166,purine ribonucleoside salvage; GO:0006168,adenine salvage; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0044209,AMP salvage; 	APRT, apt; adenine phosphoribosyltransferase [EC:2.4.2.7]; K00759; 	NP_193988.1 adenine phosphoribosyl transferase 3 [Arabidopsis thaliana]
AT4G22755	23.27	27.04	15.02	9.41	AT4G22755	GO:0000254,C-4 methylsterol oxidase activity; GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0016020,membrane; GO:0016126,sterol biosynthetic process; GO:0016491,oxidoreductase activity; 	SMO1; plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase [EC:1.14.18.10]; K14423; 	NP_567669.1 methylsterol monooxygenase 1-3 [Arabidopsis thaliana]
AT4G22780	29.33	27.28	16.25	14.14	AT4G22780	GO:0005829,cytosol; GO:0016597,amino acid binding; GO:0071456,cellular response to hypoxia; 	--	NP_001328982.1 ACT domain repeat 7 [Arabidopsis thaliana]
AT4G22820	151.78	160.52	221.79	300.65	AT4G22820	GO:0003677,DNA binding; GO:0005515,protein binding; GO:0008270,zinc ion binding; GO:0016567,protein ubiquitination; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0098542,defense response to other organism; 	--	NP_194013.1 A20/AN1-like zinc finger family protein [Arabidopsis thaliana]
AT4G23080	1.34	2.11	0.00	0.00	AT4G23080	GO:0016020,membrane; 	--	NP_001320038.1 transmembrane protein, putative (DUF239) [Arabidopsis thaliana]
AT4G23600	28.47	28.30	122.23	122.89	AT4G23600	GO:0000325,plant-type vacuole; GO:0003824,catalytic activity; GO:0004121,cystathionine beta-lyase activity; GO:0005829,cytosol; GO:0006520,cellular amino acid metabolic process; GO:0008483,transaminase activity; GO:0009058,biosynthetic process; GO:0009611,response to wounding; GO:0009737,response to abscisic acid; GO:0009753,response to jasmonic acid; GO:0010188,response to microbial phytotoxin; GO:0016829,lyase activity; GO:0030170,pyridoxal phosphate binding; GO:0042538,hyperosmotic salinity response; GO:0044540,L-cystine L-cysteine-lyase (deaminating); GO:0048046,apoplast; 	CORI3; L-cystine beta-lyase [EC:4.4.1.35]; K21623; 	NP_194091.1 Tyrosine transaminase family protein [Arabidopsis thaliana]
AT4G23630	340.12	308.82	205.81	213.76	AT4G23630	GO:0000325,plant-type vacuole; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0009617,response to bacterium; GO:0016020,membrane; GO:0071782,endoplasmic reticulum tubular network; GO:0071786,endoplasmic reticulum tubular network organization; GO:0098554,cytoplasmic side of endoplasmic reticulum membrane; 	--	NP_001328059.1 VIRB2-interacting protein 1 [Arabidopsis thaliana]
AT4G23690	117.56	112.32	68.81	83.07	AT4G23690	GO:0005576,extracellular region; GO:0009699,phenylpropanoid biosynthetic process; GO:0042349,guiding stereospecific synthesis activity; GO:0042802,identical protein binding; GO:0042803,protein homodimerization activity; GO:0048046,apoplast; GO:0050790,regulation of catalytic activity; GO:1901599,(-)-pinoresinol biosynthetic process; 	--	NP_194100.1 Disease resistance-responsive (dirigent-like protein) family protein [Arabidopsis thaliana]
AT4G23840	9.93	11.34	18.25	19.10	AT4G23840	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005575,cellular_component; 	--	CAD5328855.1 unnamed protein product [Arabidopsis thaliana]
AT4G24260	3.61	3.44	10.04	9.13	AT4G24260	GO:0000272,polysaccharide catabolic process; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0008810,cellulase activity; GO:0009624,response to nematode; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0030245,cellulose catabolic process; GO:0071555,cell wall organization; 	E3.2.1.4; endoglucanase [EC:3.2.1.4]; K01179; 	NP_194157.1 glycosyl hydrolase 9A3 [Arabidopsis thaliana]
AT4G24380	116.49	114.26	75.24	60.45	AT4G24380	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0016020,membrane; GO:0016787,hydrolase activity; 	--	NP_567701.1 dihydrofolate reductase [Arabidopsis thaliana]
AT4G24430	3.74	4.11	0.70	1.12	AT4G24430	GO:0000325,plant-type vacuole; GO:0003824,catalytic activity; GO:0005576,extracellular region; GO:0005975,carbohydrate metabolic process; GO:0016829,lyase activity; GO:0030246,carbohydrate binding; GO:0102210,rhamnogalacturonan endolyase activity; GO:1901575,organic substance catabolic process; 	RGL4, rhiE; rhamnogalacturonan endolyase [EC:4.2.2.23]; K18195; 	NP_567703.4 Rhamnogalacturonate lyase family protein [Arabidopsis thaliana]
AT4G24460	13.20	13.37	6.17	4.44	AT4G24460	GO:0002229,defense response to oomycetes; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0034635,glutathione transport; GO:0046686,response to cadmium ion; 	--	NP_001329790.1 CRT (chloroquine-resistance transporter)-like transporter 2 [Arabidopsis thaliana]
AT4G24480	6.16	4.46	3.04	1.80	AT4G24480	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; 	--	NP_001329470.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT4G24640	245.92	201.35	129.83	124.61	AT4G24640	GO:0000325,plant-type vacuole; GO:0004857,enzyme inhibitor activity; GO:0008150,biological_process; GO:0043086,negative regulation of catalytic activity; 	--	NP_194195.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT4G24680	11.81	13.82	21.66	21.27	AT4G24680	GO:0006325,chromatin organization; GO:0040029,epigenetic regulation of gene expression; 	--	NP_001329062.1 modifier of snc1 [Arabidopsis thaliana]
AT4G24740	34.60	31.10	54.25	62.74	AT4G24740	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0004713,protein tyrosine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006397,mRNA processing; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018108,peptidyl-tyrosine phosphorylation; GO:0046777,protein autophosphorylation; GO:0106310,protein serine kinase activity; 	E2.7.12.1; dual-specificity kinase [EC:2.7.12.1]; K08287; 	NP_001329105.1 LAMMER-type protein kinase AFC2 [Arabidopsis thaliana]
AT4G24750	47.98	64.74	19.19	26.16	AT4G24750	GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009536,plastid; 	--	NP_194206.2 Rhodanese/Cell cycle control phosphatase superfamily protein [Arabidopsis thaliana]
AT4G24820	314.00	294.67	489.65	505.37	AT4G24820	GO:0000502,proteasome complex; GO:0005634,nucleus; GO:0005829,cytosol; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; 	PSMD6, RPN7; 26S proteasome regulatory subunit N7; K03037; 	NP_567709.1 26S proteasome regulatory subunit Rpn7 [Arabidopsis thaliana]
AT4G24960	204.06	174.44	100.87	93.29	AT4G24960	GO:0003674,molecular_function; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009555,pollen development; GO:0009737,response to abscisic acid; GO:0009908,flower development; GO:0010507,negative regulation of autophagy; GO:0016020,membrane; GO:0042538,hyperosmotic salinity response; 	--	NP_567713.1 HVA22 homologue D [Arabidopsis thaliana]
AT4G25010	32.96	30.44	13.56	14.36	AT4G25010	GO:0005886,plasma membrane; GO:0008515,sucrose transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:0009901,anther dehiscence; GO:0015770,sucrose transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0080112,seed growth; GO:1905200,gibberellic acid transmembrane transport; GO:1905201,gibberellin transmembrane transporter activity; 	--	NP_194231.1 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT4G25040	188.16	164.14	117.09	117.54	AT4G25040	GO:0005886,plasma membrane; GO:0008150,biological_process; GO:0016020,membrane; GO:0051539,4 iron, 4 sulfur cluster binding; 	--	NP_194234.1 Uncharacterized protein family (UPF0497) [Arabidopsis thaliana]
AT4G25050	320.72	329.03	233.96	203.41	AT4G25050	GO:0000036,acyl carrier activity; GO:0005829,cytosol; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0006952,defense response; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009627,systemic acquired resistance; GO:0009941,chloroplast envelope; GO:0042335,cuticle development; 	--	NP_001190831.1 acyl carrier protein 4 [Arabidopsis thaliana]
AT4G25100	71.50	78.98	5.81	1.36	AT4G25100	GO:0004784,superoxide dismutase activity; GO:0005507,copper ion binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006801,superoxide metabolic process; GO:0007623,circadian rhythm; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009642,response to light intensity; GO:0009941,chloroplast envelope; GO:0010193,response to ozone; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0019430,removal of superoxide radicals; GO:0019904,protein domain specific binding; GO:0031969,chloroplast membrane; GO:0042644,chloroplast nucleoid; GO:0046686,response to cadmium ion; GO:0046688,response to copper ion; GO:0046872,metal ion binding; 	SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]; K04564; 	NP_001190834.1 Fe superoxide dismutase 1 [Arabidopsis thaliana]
AT4G25110	7.46	9.83	3.76	3.11	AT4G25110	GO:0004197,cysteine-type endopeptidase activity; GO:0006508,proteolysis; GO:0006952,defense response; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0043069,negative regulation of programmed cell death; 	--	NP_194241.3 metacaspase 2 [Arabidopsis thaliana]
AT4G25340	27.47	30.72	49.80	50.86	AT4G25340	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006334,nucleosome assembly; GO:0016853,isomerase activity; GO:0042393,histone binding; 	--	NP_567717.1 FK506 BINDING PROTEIN 53 [Arabidopsis thaliana]
AT4G25370	80.06	100.92	51.30	45.38	AT4G25370	GO:0005515,protein binding; GO:0005829,cytosol; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; 	--	NP_567718.1 Double Clp-N motif protein [Arabidopsis thaliana]
AT4G25570	83.10	76.37	52.04	51.98	AT4G25570	GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0009507,chloroplast; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0019904,protein domain specific binding; GO:0046872,metal ion binding; GO:0055085,transmembrane transport; GO:0140571,transmembrane ascorbate ferrireductase activity; 	--	NP_001328918.1 Cytochrome b561/ferric reductase transmembrane protein family [Arabidopsis thaliana]
AT4G25630	104.62	128.35	268.42	256.32	AT4G25630	GO:0000494,box C/D RNA 3'-end processing; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0004540,ribonuclease activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005829,cytosol; GO:0006364,rRNA processing; GO:0006952,defense response; GO:0008168,methyltransferase activity; GO:0008649,rRNA methyltransferase activity; GO:0016592,mediator complex; GO:0016740,transferase activity; GO:0030515,snoRNA binding; GO:0031167,rRNA methylation; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0032259,methylation; GO:0090501,RNA phosphodiester bond hydrolysis; GO:1990258,histone glutamine methylation; GO:1990259,histone-glutamine methyltransferase activity; GO:1990904,ribonucleoprotein complex; 	NOP1, FBL; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]; K14563; 	NP_567724.1 fibrillarin 2 [Arabidopsis thaliana]
AT4G25650	37.93	31.27	19.28	25.31	AT4G25650	GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009528,plastid inner membrane; GO:0009536,plastid; GO:0009706,chloroplast inner membrane; GO:0009941,chloroplast envelope; GO:0010277,chlorophyllide a oxygenase [overall] activity; GO:0015031,protein transport; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; 	--	NP_567725.1 ACD1-like protein [Arabidopsis thaliana]
AT4G25660	24.41	28.84	51.41	48.58	AT4G25660	GO:0008233,peptidase activity; GO:0016579,protein deubiquitination; GO:0070646,protein modification by small protein removal; GO:0101005,deubiquitinase activity; 	--	NP_194296.1 PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]
AT4G25680	74.39	76.00	131.60	102.31	AT4G25680	GO:0008233,peptidase activity; GO:0016579,protein deubiquitination; GO:0070646,protein modification by small protein removal; GO:0101005,deubiquitinase activity; 	--	NP_194298.1 PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]
AT4G25730	34.49	38.53	58.57	57.70	AT4G25730	GO:0000453,enzyme-directed rRNA 2'-O-methylation; GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0001510,RNA methylation; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0008168,methyltransferase activity; GO:0008173,RNA methyltransferase activity; GO:0008649,rRNA methyltransferase activity; GO:0008650,rRNA (uridine-2'-O-)-methyltransferase activity; GO:0016435,rRNA (guanine) methyltransferase activity; GO:0016740,transferase activity; GO:0030687,preribosome, large subunit precursor; GO:0031167,rRNA methylation; GO:0032259,methylation; GO:0042254,ribosome biogenesis; 	--	NP_194303.2 FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
AT4G25890	130.81	163.80	224.97	281.98	AT4G25890	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006414,translational elongation; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-LP1, RPLP1; large subunit ribosomal protein LP1; K02942; 	NP_194319.1 60S acidic ribosomal protein family [Arabidopsis thaliana]
AT4G26190	11.37	9.90	16.90	19.68	AT4G26190	GO:0004721,phosphoprotein phosphatase activity; GO:0005634,nucleus; GO:0016787,hydrolase activity; 	--	NP_001328350.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]
AT4G26230	174.42	162.37	276.52	242.21	AT4G26230	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L31e, RPL31; large subunit ribosomal protein L31e; K02910; 	NP_194353.1 Ribosomal protein L31e family protein [Arabidopsis thaliana]
AT4G26270	75.07	57.63	189.84	175.00	AT4G26270	GO:0000166,nucleotide binding; GO:0003824,catalytic activity; GO:0003872,6-phosphofructokinase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006002,fructose 6-phosphate metabolic process; GO:0006096,glycolytic process; GO:0008152,metabolic process; GO:0010053,root epidermal cell differentiation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0061615,glycolytic process through fructose-6-phosphate; GO:0071456,cellular response to hypoxia; 	pfkA, PFK; 6-phosphofructokinase 1 [EC:2.7.1.11]; K00850; 	NP_567742.1 phosphofructokinase 3 [Arabidopsis thaliana]
AT4G26480	31.59	25.28	59.34	66.92	AT4G26480	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0048024,regulation of mRNA splicing, via spliceosome; 	--	NP_001320071.1 RNA-binding KH domain-containing protein [Arabidopsis thaliana]
AT4G26530	65.26	78.66	53.58	43.10	AT4G26530	GO:0003729,mRNA binding; GO:0004332,fructose-bisphosphate aldolase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006094,gluconeogenesis; GO:0006096,glycolytic process; GO:0016829,lyase activity; GO:0030388,fructose 1,6-bisphosphate metabolic process; 	ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; K01623; 	NP_001031721.1 Aldolase superfamily protein [Arabidopsis thaliana]
AT4G26555	22.98	34.31	13.34	12.07	AT4G26555	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0009414,response to water deprivation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0009644,response to high light intensity; GO:0016853,isomerase activity; GO:0031647,regulation of protein stability; GO:0031977,thylakoid lumen; 	--	NP_001328908.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT4G26600	9.18	9.49	19.20	17.00	AT4G26600	GO:0000470,maturation of LSU-rRNA; GO:0001510,RNA methylation; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009383,rRNA (cytosine-C5-)-methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042254,ribosome biogenesis; GO:0070475,rRNA base methylation; 	--	NP_001328282.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT4G26650	11.79	17.28	20.43	30.06	AT4G26650	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0006417,regulation of translation; 	MSI; RNA-binding protein Musashi; K14411; 	NP_567753.1 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
AT4G26780	42.38	54.43	98.42	73.62	AT4G26780	GO:0000166,nucleotide binding; GO:0000774,adenyl-nucleotide exchange factor activity; GO:0001405,PAM complex, Tim23 associated import motor; GO:0005507,copper ion binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0006457,protein folding; GO:0009408,response to heat; GO:0010286,heat acclimation; GO:0030150,protein import into mitochondrial matrix; GO:0042803,protein homodimerization activity; GO:0046872,metal ion binding; GO:0051082,unfolded protein binding; GO:0051087,chaperone binding; 	--	NP_567757.1 Co-chaperone GrpE family protein [Arabidopsis thaliana]
AT4G26810	23.36	38.51	73.59	56.76	AT4G26810	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0008150,biological_process; 	--	NP_001119064.1 SWIB/MDM2 domain superfamily protein [Arabidopsis thaliana]
AT4G26870	30.92	27.22	46.64	50.46	AT4G26870	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003723,RNA binding; GO:0004812,aminoacyl-tRNA ligase activity; GO:0004815,aspartate-tRNA ligase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006412,translation; GO:0006418,tRNA aminoacylation for protein translation; GO:0006422,aspartyl-tRNA aminoacylation; GO:0009506,plasmodesma; GO:0016874,ligase activity; GO:0017101,aminoacyl-tRNA synthetase multienzyme complex; GO:0046872,metal ion binding; 	DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]; K22503; 	NP_194417.2 Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Arabidopsis thaliana]
AT4G27010	3.55	3.47	5.59	6.12	AT4G27010	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005730,nucleolus; 	--	NP_001320074.1 ribosome 60S biogenesis amino-terminal protein [Arabidopsis thaliana]
AT4G27090	946.41	1004.59	1634.75	1569.22	AT4G27090	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005773,vacuole; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042273,ribosomal large subunit biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L14e, RPL14; large subunit ribosomal protein L14e; K02875; 	NP_194439.1 Ribosomal protein L14 [Arabidopsis thaliana]
AT4G27130	76.73	82.82	283.18	229.59	AT4G27130	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005829,cytosol; GO:0006412,translation; GO:0006413,translational initiation; GO:0006417,regulation of translation; 	EIF1, SUI1; translation initiation factor 1; K03113; 	NP_194443.1 Translation initiation factor SUI1 family protein [Arabidopsis thaliana]
AT4G27435	24.24	26.64	10.34	9.14	AT4G27435	GO:0016020,membrane; 	--	NP_567774.1 fiber (DUF1218) [Arabidopsis thaliana]
AT4G27440	693.54	677.93	325.98	420.86	AT4G27440	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005829,cytosol; GO:0009507,chloroplast; GO:0009527,plastid outer membrane; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009707,chloroplast outer membrane; GO:0009723,response to ethylene; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0015995,chlorophyll biosynthetic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016630,protochlorophyllide reductase activity; GO:0019904,protein domain specific binding; 	por; protochlorophyllide reductase [EC:1.3.1.33]; K00218; 	NP_001031731.1 protochlorophyllide oxidoreductase B [Arabidopsis thaliana]
AT4G27850	1.49	0.59	0.00	0.00	AT4G27850	GO:0005381,iron ion transmembrane transporter activity; GO:0005384,manganese ion transmembrane transporter activity; GO:0006880,intracellular sequestering of iron ion; GO:0010168,ER body; GO:0016020,membrane; GO:0030026,cellular manganese ion homeostasis; GO:0034755,iron ion transmembrane transport; GO:0071421,manganese ion transmembrane transport; 	--	NP_194514.1 Glycine-rich protein family [Arabidopsis thaliana]
AT4G27860	2.37	2.47	5.28	7.67	AT4G27860	GO:0005381,iron ion transmembrane transporter activity; GO:0005384,manganese ion transmembrane transporter activity; GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006880,intracellular sequestering of iron ion; GO:0010168,ER body; GO:0016020,membrane; GO:0030026,cellular manganese ion homeostasis; GO:0034755,iron ion transmembrane transport; GO:0071421,manganese ion transmembrane transport; 	--	NP_001190855.1 vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]
AT4G27990	97.35	65.06	36.47	35.00	AT4G27990	GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010020,chloroplast fission; GO:0016020,membrane; GO:0090143,nucleoid organization; 	--	NP_194528.1 YGGT family protein [Arabidopsis thaliana]
AT4G28090	7.13	6.11	2.46	2.11	AT4G28090	GO:0005507,copper ion binding; GO:0016491,oxidoreductase activity; 	--	NP_194538.1 SKU5 similar 10 [Arabidopsis thaliana]
AT4G28200	52.95	53.83	121.67	129.68	AT4G28200	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0006396,RNA processing; GO:0030515,snoRNA binding; GO:0032040,small-subunit processome; GO:0034388,Pwp2p-containing subcomplex of 90S preribosome; 	UTP6; U3 small nucleolar RNA-associated protein 6; K14557; 	KAG7617637.1 U3 small nucleolar RNA-associated protein 6 [Arabidopsis thaliana x Arabidopsis arenosa]
AT4G28260	11.93	10.13	21.32	16.78	AT4G28260	GO:0003674,molecular_function; 	--	NP_001078455.1 acyl-UDP-N-acetylglucosamine O-acyltransferase [Arabidopsis thaliana]
AT4G28450	25.00	25.58	54.63	39.26	AT4G28450	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0016567,protein ubiquitination; GO:0032040,small-subunit processome; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_567810.5 WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana]
AT4G28510	49.18	53.16	93.80	93.07	AT4G28510	GO:0000325,plant-type vacuole; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005747,mitochondrial respiratory chain complex I; GO:0007005,mitochondrion organization; GO:0016020,membrane; 	--	NP_194580.1 prohibitin 1 [Arabidopsis thaliana]
AT4G28710	10.35	7.70	5.12	4.77	AT4G28710	GO:0000146,microfilament motor activity; GO:0000166,nucleotide binding; GO:0003774,cytoskeletal motor activity; GO:0003779,actin binding; GO:0005515,protein binding; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0007015,actin filament organization; GO:0015629,actin cytoskeleton; GO:0016459,myosin complex; GO:0030048,actin filament-based movement; GO:0030050,vesicle transport along actin filament; GO:0031982,vesicle; GO:0048767,root hair elongation; GO:0051015,actin filament binding; 	MYO5; myosin V; K10357; 	NP_194600.2 Myosin family protein with Dil domain-containing protein [Arabidopsis thaliana]
AT4G28750	197.95	165.71	111.70	105.44	AT4G28750	GO:0003729,mRNA binding; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009522,photosystem I; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009538,photosystem I reaction center; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0019904,protein domain specific binding; 	psaE; photosystem I subunit IV; K02693; 	NP_567818.2 Photosystem I reaction centre subunit IV / PsaE protein [Arabidopsis thaliana]
AT4G28930	10.21	19.02	1.92	4.11	AT4G28930	GO:0008150,biological_process; 	--	NP_194622.1 hypothetical protein AT4G28930 [Arabidopsis thaliana]
AT4G29010	198.70	212.57	143.80	131.59	AT4G29010	GO:0003824,catalytic activity; GO:0003857,3-hydroxyacyl-CoA dehydrogenase activity; GO:0004165,delta(3)-delta(2)-enoyl-CoA isomerase activity; GO:0004300,enoyl-CoA hydratase activity; GO:0005777,peroxisome; GO:0005886,plasma membrane; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006635,fatty acid beta-oxidation; GO:0008152,metabolic process; GO:0008692,3-hydroxybutyryl-CoA epimerase activity; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009695,jasmonic acid biosynthetic process; GO:0009908,flower development; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0016829,lyase activity; GO:0016853,isomerase activity; GO:0032787,monocarboxylic acid metabolic process; GO:0070403,NAD+ binding; 	MFP2; enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211]; K10527; 	NP_194630.1 Enoyl-CoA hydratase/isomerase family [Arabidopsis thaliana]
AT4G29020	141.95	159.79	58.72	86.40	AT4G29020	--	--	NP_194631.1 glycine-rich protein [Arabidopsis thaliana]
AT4G29030	315.08	327.06	93.09	105.96	AT4G29030	--	--	NP_194632.1 Putative membrane lipoprotein [Arabidopsis thaliana]
AT4G29100	14.43	17.49	26.65	30.50	AT4G29100	GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009737,response to abscisic acid; GO:0046983,protein dimerization activity; 	--	NP_001328529.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Arabidopsis thaliana]
AT4G29380	6.01	8.96	11.66	11.80	AT4G29380	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005770,late endosome; GO:0005794,Golgi apparatus; GO:0005942,phosphatidylinositol 3-kinase complex; GO:0006468,protein phosphorylation; GO:0006623,protein targeting to vacuole; GO:0006914,autophagy; GO:0009555,pollen development; GO:0009846,pollen germination; GO:0010008,endosome membrane; GO:0015031,protein transport; GO:0016020,membrane; GO:0016236,macroautophagy; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0030242,autophagy of peroxisome; GO:0032991,protein-containing complex; GO:0034271,phosphatidylinositol 3-kinase complex, class III, type I; GO:0034272,phosphatidylinositol 3-kinase complex, class III, type II; GO:0045324,late endosome to vacuole transport; GO:0048015,phosphatidylinositol-mediated signaling; GO:0071561,nucleus-vacuole junction; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0106310,protein serine kinase activity; 	PIK3R4, VPS15; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]; K08333; 	NP_194667.1 protein kinase family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT4G29410	222.36	225.91	557.73	433.81	AT4G29410	GO:0000976,transcription cis-regulatory region binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L28e, RPL28; large subunit ribosomal protein L28e; K02903; 	NP_001078470.1 Ribosomal L28e protein family [Arabidopsis thaliana]
AT4G29510	42.54	43.25	77.10	56.95	AT4G29510	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006325,chromatin organization; GO:0008168,methyltransferase activity; GO:0016274,protein-arginine N-methyltransferase activity; GO:0016740,transferase activity; GO:0018216,peptidyl-arginine methylation; GO:0032259,methylation; GO:0035242,protein-arginine omega-N asymmetric methyltransferase activity; 	PRMT1; type I protein arginine methyltransferase [EC:2.1.1.319]; K11434; 	NP_194680.1 arginine methyltransferase 11 [Arabidopsis thaliana]
AT4G29580	0.87	0.38	4.02	4.85	AT4G29580	GO:0003824,catalytic activity; GO:0004126,cytidine deaminase activity; GO:0005829,cytosol; GO:0006807,nitrogen compound metabolic process; GO:0008270,zinc ion binding; GO:0009972,cytidine deamination; GO:0046872,metal ion binding; GO:0071704,organic substance metabolic process; 	--	NP_001154274.1 Cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana]
AT4G30064	28.67	23.90	2.85	0.00	AT4G30064	GO:0005576,extracellular region; GO:0006952,defense response; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001031753.1 low-molecular-weight cysteine-rich 61 [Arabidopsis thaliana]
AT4G30110	4.84	6.49	1.42	2.89	AT4G30110	GO:0000041,transition metal ion transport; GO:0000166,nucleotide binding; GO:0005215,transporter activity; GO:0005385,zinc ion transmembrane transporter activity; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006812,cation transport; GO:0008551,P-type cadmium transporter activity; GO:0015086,cadmium ion transmembrane transporter activity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016463,P-type zinc transporter activity; GO:0016887,ATP hydrolysis activity; GO:0019829,ATPase-coupled cation transmembrane transporter activity; GO:0034220,ion transmembrane transport; GO:0046872,metal ion binding; GO:0055069,zinc ion homeostasis; GO:0070574,cadmium ion transmembrane transport; GO:0071577,zinc ion transmembrane transport; GO:0098655,cation transmembrane transport; 	zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]; K01534; 	NP_001320088.1 heavy metal atpase 2 [Arabidopsis thaliana]
AT4G30150	5.63	4.31	9.91	9.21	AT4G30150	GO:0003674,molecular_function; GO:0005730,nucleolus; GO:0042254,ribosome biogenesis; 	--	NP_194744.2 Urb2/Npa2 family protein [Arabidopsis thaliana]
AT4G30400	9.08	8.35	1.90	3.97	AT4G30400	GO:0005886,plasma membrane; GO:0016020,membrane; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0031625,ubiquitin protein ligase binding; GO:0046872,metal ion binding; 	--	NP_567846.1 RING/U-box superfamily protein [Arabidopsis thaliana]
AT4G30490	4.70	8.79	21.46	9.29	AT4G30490	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005516,calmodulin binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0016887,ATP hydrolysis activity; 	--	NP_567847.1 AFG1-like ATPase family protein [Arabidopsis thaliana]
AT4G30750	7.99	8.78	18.31	20.18	AT4G30750	--	--	NP_567852.1 hypothetical protein AT4G30750 [Arabidopsis thaliana]
AT4G30760	51.66	59.46	104.87	79.83	AT4G30760	GO:0003674,molecular_function; GO:0004519,endonuclease activity; GO:0004540,ribonuclease activity; GO:0005777,peroxisome; GO:0010468,regulation of gene expression; GO:0016787,hydrolase activity; GO:0035194,post-transcriptional gene silencing by RNA; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090501,RNA phosphodiester bond hydrolysis; GO:1903231,mRNA base-pairing post-transcriptional repressor activity; 	--	NP_567853.1 Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
AT4G30810	53.53	62.95	37.73	35.85	AT4G30810	GO:0000325,plant-type vacuole; GO:0004180,carboxypeptidase activity; GO:0004185,serine-type carboxypeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; 	--	NP_567854.1 serine carboxypeptidase-like 29 [Arabidopsis thaliana]
AT4G30850	22.62	22.47	6.58	12.49	AT4G30850	GO:0009725,response to hormone; GO:0009744,response to sucrose; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0038023,signaling receptor activity; 	--	NP_194814.2 heptahelical transmembrane protein2 [Arabidopsis thaliana]
AT4G30990	9.24	9.12	15.43	16.56	AT4G30990	GO:0003674,molecular_function; GO:0005730,nucleolus; GO:0005794,Golgi apparatus; GO:0008150,biological_process; GO:0030686,90S preribosome; GO:0032040,small-subunit processome; 	--	NP_001328345.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT4G31050	6.16	2.77	20.96	13.99	AT4G31050	GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009249,protein lipoylation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016415,octanoyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0033819,lipoyl(octanoyl) transferase activity; GO:0036211,protein modification process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; 	lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]; K03801; 	NP_567866.1 Biotin/lipoate A/B protein ligase family [Arabidopsis thaliana]
AT4G31130	147.83	189.63	52.22	70.83	AT4G31130	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_194842.1 keratin-associated protein (DUF1218) [Arabidopsis thaliana]
AT4G31160	10.03	10.25	16.24	15.89	AT4G31160	GO:0005515,protein binding; GO:0005634,nucleus; GO:0009793,embryo development ending in seed dormancy; GO:0009908,flower development; GO:0010154,fruit development; GO:0016567,protein ubiquitination; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048827,phyllome development; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	DCAF1, VPRBP; DDB1- and CUL4-associated factor 1 [EC:2.7.11.1]; K11789; 	NP_194845.4 DDB1-CUL4 associated factor 1 [Arabidopsis thaliana]
AT4G31580	89.36	109.75	166.77	166.19	AT4G31580	GO:0000398,mRNA splicing, via spliceosome; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005681,spliceosomal complex; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0006397,mRNA processing; GO:0008270,zinc ion binding; GO:0008380,RNA splicing; GO:0016607,nuclear speck; GO:0046872,metal ion binding; 	SFRS7; splicing factor, arginine/serine-rich 7; K12896; 	NP_001078474.1 serine/arginine-rich 22 [Arabidopsis thaliana]
AT4G31590	21.52	25.52	12.99	13.15	AT4G31590	GO:0000139,Golgi membrane; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0042803,protein homodimerization activity; GO:0048868,pollen tube development; GO:0071555,cell wall organization; GO:0099402,plant organ development; 	--	NP_194887.1 Cellulose-synthase-like C5 [Arabidopsis thaliana]
AT4G31700	528.32	452.77	798.58	791.58	AT4G31700	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S6e, RPS6; small subunit ribosomal protein S6e; K02991; 	NP_194898.1 ribosomal protein S6 [Arabidopsis thaliana]
AT4G31840	105.74	88.25	45.50	43.87	AT4G31840	GO:0005886,plasma membrane; GO:0009055,electron transfer activity; GO:0016020,membrane; GO:0022900,electron transport chain; GO:0099503,secretory vesicle; 	--	NP_194912.1 early nodulin-like protein 15 [Arabidopsis thaliana]
AT4G32020	38.19	40.09	54.39	73.89	AT4G32020	--	--	NP_194930.1 serine/arginine repetitive matrix-like protein [Arabidopsis thaliana]
AT4G32050	15.64	20.38	22.90	33.87	AT4G32050	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_194933.2 neurochondrin family protein [Arabidopsis thaliana]
AT4G32430	6.24	4.16	9.72	11.36	AT4G32430	GO:0003723,RNA binding; GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0009451,RNA modification; GO:0043231,intracellular membrane-bounded organelle; GO:1905639,positive regulation of mitochondrial mRNA catabolic process; 	--	NP_001328428.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis thaliana]
AT4G32770	46.31	48.27	21.85	27.50	AT4G32770	GO:0005886,plasma membrane; GO:0006631,fatty acid metabolic process; GO:0006979,response to oxidative stress; GO:0009266,response to temperature stimulus; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009644,response to high light intensity; GO:0009706,chloroplast inner membrane; GO:0009915,phloem sucrose loading; GO:0009941,chloroplast envelope; GO:0009976,tocopherol cyclase activity; GO:0010189,vitamin E biosynthetic process; GO:0010287,plastoglobule; GO:0015994,chlorophyll metabolic process; GO:0016122,xanthophyll metabolic process; GO:0016853,isomerase activity; GO:0031347,regulation of defense response; GO:0052604,delta-tocopherol cyclase activity; GO:0052605,gamma-tocopherol cyclase activity; 	VTE1, SXD1; tocopherol cyclase [EC:5.5.1.24]; K09834; 	NP_567906.1 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) [Arabidopsis thaliana]
AT4G33010	239.78	239.56	143.91	145.02	AT4G33010	GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0004375,glycine dehydrogenase (decarboxylating) activity; GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0005960,glycine cleavage complex; GO:0006544,glycine metabolic process; GO:0006546,glycine catabolic process; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016491,oxidoreductase activity; GO:0016594,glycine binding; GO:0019464,glycine decarboxylation via glycine cleavage system; GO:0030170,pyridoxal phosphate binding; GO:0046686,response to cadmium ion; GO:0048046,apoplast; 	GLDC, gcvP; glycine dehydrogenase [EC:1.4.4.2]; K00281; 	NP_195027.1 glycine decarboxylase P-protein 1 [Arabidopsis thaliana]
AT4G33355	202.75	215.06	53.77	63.17	AT4G33355	GO:0003674,molecular_function; GO:0006869,lipid transport; GO:0008289,lipid binding; 	--	NP_680758.3 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT4G33500	11.53	13.26	8.84	5.39	AT4G33500	GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0009507,chloroplast; GO:0016787,hydrolase activity; GO:0017018,myosin phosphatase activity; GO:0046872,metal ion binding; 	--	NP_567923.1 Protein phosphatase 2C family protein [Arabidopsis thaliana]
AT4G33865	800.15	805.65	1460.30	1326.81	AT4G33865	GO:0003735,structural constituent of ribosome; GO:0005829,cytosol; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0008270,zinc ion binding; GO:0022627,cytosolic small ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S29e, RPS29; small subunit ribosomal protein S29e; K02980; 	NP_001319679.1 Ribosomal protein S14p/S29e family protein [Arabidopsis thaliana]
AT4G33970	15.06	8.22	20.73	21.69	AT4G33970	GO:0005199,structural constituent of cell wall; GO:0005576,extracellular region; GO:0009860,pollen tube growth; GO:0071555,cell wall organization; 	--	NP_195123.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT4G34030	39.05	51.09	13.39	17.71	AT4G34030	GO:0000166,nucleotide binding; GO:0004485,methylcrotonoyl-CoA carboxylase activity; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005886,plasma membrane; GO:0006552,leucine catabolic process; GO:0008270,zinc ion binding; GO:0016874,ligase activity; GO:0050897,cobalt ion binding; GO:1905202,methylcrotonoyl-CoA carboxylase complex; 	E6.4.1.4B; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]; K01969; 	NP_567950.1 3-methylcrotonyl-CoA carboxylase [Arabidopsis thaliana]
AT4G34120	110.45	103.43	65.89	67.16	AT4G34120	GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0045454,cell redox homeostasis; 	--	NP_567952.1 Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]
AT4G34180	150.40	156.58	250.01	225.38	AT4G34180	GO:0004061,arylformamidase activity; GO:0005576,extracellular region; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006952,defense response; GO:0019441,tryptophan catabolic process to kynurenine; GO:0043069,negative regulation of programmed cell death; GO:0099503,secretory vesicle; 	--	NP_567957.1 Cyclase family protein [Arabidopsis thaliana]
AT4G34190	93.50	102.18	42.09	65.91	AT4G34190	GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009611,response to wounding; GO:0009644,response to high light intensity; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0071486,cellular response to high light intensity; GO:0071492,cellular response to UV-A; 	--	NP_567958.1 stress enhanced protein 1 [Arabidopsis thaliana]
AT4G34240	31.80	25.90	20.69	12.65	AT4G34240	GO:0004028,3-chloroallyl aldehyde dehydrogenase activity; GO:0004029,aldehyde dehydrogenase (NAD+) activity; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0006081,cellular aldehyde metabolic process; GO:0009414,response to water deprivation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009737,response to abscisic acid; GO:0009941,chloroplast envelope; GO:0016491,oxidoreductase activity; GO:0016620,oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0033721,aldehyde dehydrogenase (NADP+) activity; GO:0043878,glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity; 	ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]; K00128; 	NP_567962.1 aldehyde dehydrogenase 3I1 [Arabidopsis thaliana]
AT4G34250	13.44	14.25	5.01	4.10	AT4G34250	GO:0006633,fatty acid biosynthetic process; GO:0009416,response to light stimulus; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; 	KCS; 3-ketoacyl-CoA synthase [EC:2.3.1.199]; K15397; 	NP_195151.1 3-ketoacyl-CoA synthase 16 [Arabidopsis thaliana]
AT4G34265	69.93	64.18	172.36	144.16	AT4G34265	GO:0008150,biological_process; 	--	NP_001329243.1 hypothetical protein AT4G34265 [Arabidopsis thaliana]
AT4G34320	5.83	8.01	12.00	17.35	AT4G34320	GO:0005575,cellular_component; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_001328759.1 transmembrane protein, putative (DUF677) [Arabidopsis thaliana]
AT4G34412	11.74	14.88	31.86	49.32	AT4G34412	GO:0000408,EKC/KEOPS complex; GO:0002949,tRNA threonylcarbamoyladenosine modification; GO:0005634,nucleus; GO:0005829,cytosol; 	--	NP_680763.2 EKC/KEOPS complex subunit tprkb-like protein [Arabidopsis thaliana]
AT4G34460	23.03	25.31	41.31	44.88	AT4G34460	GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005834,heterotrimeric G-protein complex; GO:0005886,plasma membrane; GO:0006952,defense response; GO:0007165,signal transduction; GO:0007186,G protein-coupled receptor signaling pathway; GO:0009723,response to ethylene; GO:0009738,abscisic acid-activated signaling pathway; GO:0009845,seed germination; GO:0009867,jasmonic acid mediated signaling pathway; GO:0009991,response to extracellular stimulus; GO:0010118,stomatal movement; GO:0010154,fruit development; GO:0016020,membrane; GO:0030159,signaling receptor complex adaptor activity; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0048364,root development; GO:0048527,lateral root development; GO:0050832,defense response to fungus; GO:0072593,reactive oxygen species metabolic process; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:1905392,plant organ morphogenesis; GO:2000280,regulation of root development; 	GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1; K04536; 	NP_195172.1 GTP binding protein beta 1 [Arabidopsis thaliana]
AT4G34590	34.66	24.68	54.13	52.42	AT4G34590	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009744,response to sucrose; GO:0017148,negative regulation of translation; GO:0043565,sequence-specific DNA binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0046982,protein heterodimerization activity; GO:0080149,sucrose induced translational repression; 	--	NP_195185.1 G-box binding factor 6 [Arabidopsis thaliana]
AT4G34600	0.00	0.00	2.16	12.51	AT4G34600	GO:0005179,hormone activity; GO:0005515,protein binding; GO:0007165,signal transduction; GO:0009860,pollen tube growth; GO:0010039,response to iron ion; GO:0010447,response to acidic pH; GO:0048226,Casparian strip; GO:0050801,ion homeostasis; GO:0055072,iron ion homeostasis; GO:0071555,cell wall organization; GO:2000067,regulation of root morphogenesis; 	--	NP_001329855.1 transmembrane protein [Arabidopsis thaliana]
AT4G34630	67.16	72.96	38.81	46.27	AT4G34630	--	--	NP_195189.1 prostatic spermine-binding-like protein [Arabidopsis thaliana]
AT4G34850	164.14	162.50	91.88	92.36	AT4G34850	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009813,flavonoid biosynthetic process; GO:0010584,pollen exine formation; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0030639,polyketide biosynthetic process; GO:0080110,sporopollenin biosynthetic process; GO:0090439,tetraketide alpha-pyrone synthase activity; 	--	NP_567971.1 Chalcone and stilbene synthase family protein [Arabidopsis thaliana]
AT4G34910	12.83	11.50	23.50	23.52	AT4G34910	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0003729,mRNA binding; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005730,nucleolus; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_195217.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]
AT4G34950	52.80	59.84	99.41	85.80	AT4G34950	GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_195221.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT4G34960	17.60	14.41	4.97	6.39	AT4G34960	GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0006457,protein folding; GO:0016018,cyclosporin A binding; GO:0016853,isomerase activity; GO:0043231,intracellular membrane-bounded organelle; 	--	NP_001328824.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]
AT4G35010	24.37	25.57	16.75	12.48	AT4G35010	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565,beta-galactosidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0030246,carbohydrate binding; GO:0048046,apoplast; 	--	NP_567973.1 beta-galactosidase 11 [Arabidopsis thaliana]
AT4G35040	18.18	18.02	35.20	33.67	AT4G35040	GO:0000976,transcription cis-regulatory region binding; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0010043,response to zinc ion; 	--	NP_001320139.1 Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]
AT4G35160	22.02	24.20	10.57	16.23	AT4G35160	GO:0005737,cytoplasm; GO:0008168,methyltransferase activity; GO:0008171,O-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0016740,transferase activity; GO:0017096,acetylserotonin O-methyltransferase activity; GO:0019438,aromatic compound biosynthetic process; GO:0030187,melatonin biosynthetic process; GO:0032259,methylation; GO:0046983,protein dimerization activity; 	ASMT; acetylserotonin O-methyltransferase, plant [EC:2.1.1.4]; K22588; 	NP_195242.1 O-methyltransferase family protein [Arabidopsis thaliana]
AT4G35250	64.09	51.80	40.62	33.96	AT4G35250	GO:0003743,translation initiation factor activity; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0006413,translational initiation; GO:0009507,chloroplast; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0010207,photosystem II assembly; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0042651,thylakoid membrane; 	--	NP_195251.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT4G35320	54.88	48.72	103.36	78.16	AT4G35320	--	--	NP_567982.1 hypothetical protein AT4G35320 [Arabidopsis thaliana]
AT4G35335	27.02	34.32	14.03	22.96	AT4G35335	--	EEF2; elongation factor 2; K03234; 	CAA7016615.1 unnamed protein product [Microthlaspi erraticum]
AT4G35350	45.65	40.42	28.67	28.84	AT4G35350	GO:0000325,plant-type vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0005615,extracellular space; GO:0005634,nucleus; GO:0005764,lysosome; GO:0005773,vacuole; GO:0005886,plasma membrane; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0010623,programmed cell death involved in cell development; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0051603,proteolysis involved in protein catabolic process; 	--	NP_567983.1 xylem cysteine peptidase 1 [Arabidopsis thaliana]
AT4G35420	47.53	58.01	21.33	19.02	AT4G35420	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0009555,pollen development; GO:0010584,pollen exine formation; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0048316,seed development; GO:0080110,sporopollenin biosynthetic process; 	--	NP_195268.2 dihydroflavonol 4-reductase-like1 [Arabidopsis thaliana]
AT4G35570	193.38	109.68	296.38	286.91	AT4G35570	GO:0000785,chromatin; GO:0003677,DNA binding; GO:0003682,chromatin binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006325,chromatin organization; GO:0006355,regulation of DNA-templated transcription; GO:0030527,structural constituent of chromatin; 	--	NP_001329802.1 high mobility group B5 [Arabidopsis thaliana]
AT4G35580	17.08	21.82	29.01	36.22	AT4G35580	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005516,calmodulin binding; GO:0005634,nucleus; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0006355,regulation of DNA-templated transcription; GO:0016020,membrane; GO:0031347,regulation of defense response; GO:0045892,negative regulation of DNA-templated transcription; GO:0071470,cellular response to osmotic stress; GO:1900426,positive regulation of defense response to bacterium; 	--	NP_567986.3 NAC transcription factor-like 9 [Arabidopsis thaliana]
AT4G35950	54.04	40.32	26.13	26.29	AT4G35950	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0005938,cell cortex; GO:0007015,actin filament organization; GO:0007163,establishment or maintenance of cell polarity; GO:0007264,small GTPase mediated signal transduction; GO:0008360,regulation of cell shape; GO:0016020,membrane; GO:0019901,protein kinase binding; GO:0030865,cortical cytoskeleton organization; GO:0031410,cytoplasmic vesicle; GO:0032956,regulation of actin cytoskeleton organization; GO:0042995,cell projection; GO:0110165,cellular anatomical entity; 	RAC1; Ras-related C3 botulinum toxin substrate 1; K04392; 	NP_195320.1 RAC-like 6 [Arabidopsis thaliana]
AT4G36130	406.77	407.97	670.55	691.20	AT4G36130	GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005773,vacuole; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L8e, RPL8; large subunit ribosomal protein L8e; K02938; 	NP_195336.1 Ribosomal protein L2 family [Arabidopsis thaliana]
AT4G36410	4.82	7.42	20.14	16.96	AT4G36410	GO:0000166,nucleotide binding; GO:0000209,protein polyubiquitination; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0009739,response to gibberellin; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0061631,ubiquitin conjugating enzyme activity; 	UBE2W, UBC16; ubiquitin-conjugating enzyme E2 W [EC:2.3.2.25]; K10688; 	NP_568004.1 ubiquitin-conjugating enzyme 17 [Arabidopsis thaliana]
AT4G36580	9.13	10.03	12.26	22.16	AT4G36580	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0007005,mitochondrion organization; GO:0008270,zinc ion binding; GO:0016887,ATP hydrolysis activity; 	--	NP_195376.2 AAA-type ATPase family protein [Arabidopsis thaliana]
AT4G36810	69.49	70.84	38.10	38.48	AT4G36810	GO:0004161,dimethylallyltranstransferase activity; GO:0004311,farnesyltranstransferase activity; GO:0004337,geranyltranstransferase activity; GO:0004659,prenyltransferase activity; GO:0005515,protein binding; GO:0005829,cytosol; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009513,etioplast; GO:0009536,plastid; GO:0009793,embryo development ending in seed dormancy; GO:0016117,carotenoid biosynthetic process; GO:0016740,transferase activity; GO:0033384,geranyl diphosphate biosynthetic process; GO:0033386,geranylgeranyl diphosphate biosynthetic process; GO:0043693,monoterpene biosynthetic process; GO:0045337,farnesyl diphosphate biosynthetic process; GO:0046872,metal ion binding; 	GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]; K13789; 	NP_195399.1 geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
AT4G36910	29.99	27.53	36.54	61.62	AT4G36910	GO:0009507,chloroplast; GO:0009536,plastid; GO:0045454,cell redox homeostasis; 	--	NP_195409.1 Cystathionine beta-synthase (CBS) family protein [Arabidopsis thaliana]
AT4G37000	27.82	41.04	16.87	22.14	AT4G37000	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010363,regulation of plant-type hypersensitive response; GO:0015996,chlorophyll catabolic process; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0043067,regulation of programmed cell death; GO:0051743,red chlorophyll catabolite reductase activity; GO:0098542,defense response to other organism; 	RCCR, ACD2; red chlorophyll catabolite reductase [EC:1.3.7.12]; K13545; 	NP_195417.1 accelerated cell death 2 (ACD2) [Arabidopsis thaliana]
AT4G37300	140.48	84.85	219.79	202.78	AT4G37300	GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009793,embryo development ending in seed dormancy; 	--	NP_195447.1 maternal effect embryo arrest 59 [Arabidopsis thaliana]
AT4G37310	13.24	9.26	27.52	14.77	AT4G37310	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_568024.2 cytochrome P450, family 81, subfamily H, polypeptide 1 [Arabidopsis thaliana]
AT4G37740	4.37	4.32	8.18	11.06	AT4G37740	GO:0000976,transcription cis-regulatory region binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0008285,negative regulation of cell population proliferation; GO:0032502,developmental process; GO:0048364,root development; GO:0099402,plant organ development; 	--	NP_195488.2 growth-regulating factor 2 [Arabidopsis thaliana]
AT4G37900	263.92	270.25	134.89	134.69	AT4G37900	GO:0009734,auxin-activated signaling pathway; GO:0010928,regulation of auxin mediated signaling pathway; GO:0071470,cellular response to osmotic stress; GO:2000028,regulation of photoperiodism, flowering; 	--	NP_001329025.1 hypothetical protein (duplicated DUF1399) [Arabidopsis thaliana]
AT4G37910	227.09	222.57	353.75	358.65	AT4G37910	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006457,protein folding; GO:0006950,response to stress; GO:0008270,zinc ion binding; GO:0009505,plant-type cell wall; GO:0016887,ATP hydrolysis activity; GO:0031072,heat shock protein binding; GO:0034620,cellular response to unfolded protein; GO:0042026,protein refolding; GO:0044183,protein folding chaperone; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051787,misfolded protein binding; GO:0140662,ATP-dependent protein folding chaperone; 	dnaK, HSPA9; molecular chaperone DnaK; K04043; 	NP_001328002.1 mitochondrial heat shock protein 70-1 [Arabidopsis thaliana]
AT4G37930	420.79	428.51	214.76	220.81	AT4G37930	GO:0003729,mRNA binding; GO:0003824,catalytic activity; GO:0004372,glycine hydroxymethyltransferase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006544,glycine metabolic process; GO:0006563,L-serine metabolic process; GO:0006565,L-serine catabolic process; GO:0006730,one-carbon metabolic process; GO:0007623,circadian rhythm; GO:0008266,poly(U) RNA binding; GO:0008270,zinc ion binding; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0009534,chloroplast thylakoid; GO:0009570,chloroplast stroma; GO:0009626,plant-type hypersensitive response; GO:0009853,photorespiration; GO:0010319,stromule; GO:0016740,transferase activity; GO:0019264,glycine biosynthetic process from serine; GO:0022626,cytosolic ribosome; GO:0030170,pyridoxal phosphate binding; GO:0035999,tetrahydrofolate interconversion; GO:0046653,tetrahydrofolate metabolic process; GO:0046655,folic acid metabolic process; GO:0048046,apoplast; GO:0070905,serine binding; 	glyA, SHMT; glycine hydroxymethyltransferase [EC:2.1.2.1]; K00600; 	NP_195506.1 serine transhydroxymethyltransferase 1 [Arabidopsis thaliana]
AT4G38100	21.72	18.33	33.52	49.56	AT4G38100	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; 	--	NP_568035.1 CURVATURE THYLAKOID 1D-like protein [Arabidopsis thaliana]
AT4G38190	5.55	4.63	1.92	1.82	AT4G38190	GO:0000139,Golgi membrane; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0009833,plant-type primary cell wall biogenesis; GO:0009846,pollen germination; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016760,cellulose synthase (UDP-forming) activity; GO:0030244,cellulose biosynthetic process; GO:0051753,mannan synthase activity; GO:0071555,cell wall organization; GO:0097502,mannosylation; 	--	NP_195532.1 cellulose synthase like D4 [Arabidopsis thaliana]
AT4G38710	125.86	104.99	61.07	58.96	AT4G38710	GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0006412,translation; GO:0006413,translational initiation; GO:0042803,protein homodimerization activity; 	--	NP_195583.1 glycine-rich protein [Arabidopsis thaliana]
AT4G38890	21.22	25.92	34.79	39.49	AT4G38890	GO:0002943,tRNA dihydrouridine synthesis; GO:0005773,vacuole; GO:0006397,mRNA processing; GO:0008033,tRNA processing; GO:0016491,oxidoreductase activity; GO:0017150,tRNA dihydrouridine synthase activity; GO:0046872,metal ion binding; GO:0050660,flavin adenine dinucleotide binding; 	--	NP_195600.2 FMN-linked oxidoreductases superfamily protein [Arabidopsis thaliana]
AT4G38970	1194.08	1380.15	585.83	567.10	AT4G38970	GO:0003729,mRNA binding; GO:0004332,fructose-bisphosphate aldolase activity; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006094,gluconeogenesis; GO:0006096,glycolytic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009737,response to abscisic acid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; GO:0016829,lyase activity; GO:0030388,fructose 1,6-bisphosphate metabolic process; GO:0048046,apoplast; 	ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; K01623; 	NP_568049.1 fructose-bisphosphate aldolase 2 [Arabidopsis thaliana]
AT4G39300	9.04	19.04	34.72	39.06	AT4G39300	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_849526.1 envelope glycoprotein [Arabidopsis thaliana]
AT4G39710	44.42	40.16	18.06	28.52	AT4G39710	GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0016853,isomerase activity; 	E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]; K01802; 	NP_001320168.1 FK506-binding protein 16-2 [Arabidopsis thaliana]
AT4G39940	17.00	11.09	29.46	22.63	AT4G39940	GO:0000103,sulfate assimilation; GO:0000166,nucleotide binding; GO:0004020,adenylylsulfate kinase activity; GO:0005524,ATP binding; GO:0008652,cellular amino acid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0019344,cysteine biosynthetic process; GO:0070814,hydrogen sulfide biosynthetic process; 	cysC; adenylylsulfate kinase [EC:2.7.1.25]; K00860; 	NP_195704.1 APS-kinase 2 [Arabidopsis thaliana]
AT4G40060	33.89	32.59	52.24	51.96	AT4G40060	GO:0000976,transcription cis-regulatory region binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009637,response to blue light; GO:0030308,negative regulation of cell growth; GO:0043565,sequence-specific DNA binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0048573,photoperiodism, flowering; 	--	NP_195716.1 homeobox protein 16 [Arabidopsis thaliana]
AT5G01230	9.42	11.72	27.50	26.63	AT5G01230	GO:0001510,RNA methylation; GO:0002128,tRNA nucleoside ribose methylation; GO:0002181,cytoplasmic translation; GO:0005737,cytoplasm; GO:0008033,tRNA processing; GO:0008168,methyltransferase activity; GO:0008173,RNA methyltransferase activity; GO:0008175,tRNA methyltransferase activity; GO:0016740,transferase activity; GO:0030488,tRNA methylation; GO:0032259,methylation; GO:0051301,cell division; 	--	NP_851026.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT5G01410	364.53	323.96	187.59	176.32	AT5G01410	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006520,cellular amino acid metabolic process; GO:0006979,response to oxidative stress; GO:0006982,response to lipid hydroperoxide; GO:0008615,pyridoxine biosynthetic process; GO:0009651,response to salt stress; GO:0010224,response to UV-B; GO:0010335,response to non-ionic osmotic stress; GO:0012505,endomembrane system; GO:0015994,chlorophyll metabolic process; GO:0016020,membrane; GO:0016829,lyase activity; GO:0016843,amine-lyase activity; GO:0036381,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity; GO:0042538,hyperosmotic salinity response; GO:0042803,protein homodimerization activity; GO:0042819,vitamin B6 biosynthetic process; GO:0042823,pyridoxal phosphate biosynthetic process; GO:0046982,protein heterodimerization activity; 	pdxS, pdx1; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]; K06215; 	NP_001331465.1 Aldolase-type TIM barrel family protein [Arabidopsis thaliana]
AT5G01710	5.17	5.18	12.91	8.44	AT5G01710	GO:0000138,Golgi trans cisterna; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0071704,organic substance metabolic process; 	--	NP_195791.1 methyltransferase [Arabidopsis thaliana]
AT5G02160	306.38	319.57	138.44	157.95	AT5G02160	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0009535,chloroplast thylakoid membrane; GO:0016020,membrane; GO:0032055,negative regulation of translation in response to stress; 	--	NP_195836.5 transmembrane protein [Arabidopsis thaliana]
AT5G02450	295.19	233.09	588.21	571.78	AT5G02450	GO:0000325,plant-type vacuole; GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L36e, RPL36; large subunit ribosomal protein L36e; K02920; 	NP_195865.1 Ribosomal protein L36e family protein [Arabidopsis thaliana]
AT5G02620	15.96	14.10	11.08	5.01	AT5G02620	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005886,plasma membrane; GO:0008157,protein phosphatase 1 binding; GO:0016020,membrane; GO:0019888,protein phosphatase regulator activity; GO:0035304,regulation of protein dephosphorylation; GO:0050790,regulation of catalytic activity; 	--	KAG7600925.1 Ankyrin repeat [Arabidopsis thaliana x Arabidopsis arenosa]
AT5G02870	473.17	495.66	802.27	785.40	AT5G02870	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005773,vacuole; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L4e, RPL4; large subunit ribosomal protein L4e; K02930; 	NP_195907.1 Ribosomal protein L4/L1 family [Arabidopsis thaliana]
AT5G03350	38.05	36.83	13.91	3.16	AT5G03350	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009617,response to bacterium; GO:0009627,systemic acquired resistance; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0030246,carbohydrate binding; GO:0048046,apoplast; GO:0050896,response to stimulus; GO:0071446,cellular response to salicylic acid stimulus; 	--	NP_195955.1 Legume lectin family protein [Arabidopsis thaliana]
AT5G03730	35.63	20.88	18.75	16.01	AT5G03730	GO:0000166,nucleotide binding; GO:0001666,response to hypoxia; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005789,endoplasmic reticulum membrane; GO:0006468,protein phosphorylation; GO:0009686,gibberellin biosynthetic process; GO:0009723,response to ethylene; GO:0009744,response to sucrose; GO:0009750,response to fructose; GO:0009873,ethylene-activated signaling pathway; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0010182,sugar mediated signaling pathway; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0046777,protein autophosphorylation; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0106310,protein serine kinase activity; GO:2000035,regulation of stem cell division; GO:2000069,regulation of post-embryonic root development; 	CTR1; serine/threonine-protein kinase CTR1 [EC:2.7.11.1]; K14510; 	NP_195993.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT5G04180	55.62	53.72	37.63	32.77	AT5G04180	GO:0004089,carbonate dehydratase activity; GO:0006730,one-carbon metabolic process; GO:0008270,zinc ion binding; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010037,response to carbon dioxide; GO:0016829,lyase activity; GO:0016836,hydro-lyase activity; GO:0046872,metal ion binding; 	cah; carbonic anhydrase [EC:4.2.1.1]; K01674; 	NP_196038.1 alpha carbonic anhydrase 3 [Arabidopsis thaliana]
AT5G04320	6.13	8.93	11.94	18.73	AT5G04320	GO:0000775,chromosome, centromeric region; GO:0005634,nucleus; GO:0007059,chromosome segregation; GO:0016043,cellular component organization; GO:0034090,maintenance of meiotic sister chromatid cohesion; GO:0045132,meiotic chromosome segregation; GO:0045144,meiotic sister chromatid segregation; 	--	NP_001331957.1 Shugoshin C terminus [Arabidopsis thaliana]
AT5G04430	252.01	259.81	444.89	424.32	AT5G04430	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003727,single-stranded RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0008380,RNA splicing; GO:0010468,regulation of gene expression; GO:0046719,regulation by virus of viral protein levels in host cell; 	--	NP_196063.1 binding to TOMV RNA 1L (long form) [Arabidopsis thaliana]
AT5G04885	114.23	117.76	72.63	80.03	AT5G04885	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0008422,beta-glucosidase activity; GO:0009251,glucan catabolic process; GO:0009969,xyloglucan biosynthetic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; 	bglX; beta-glucosidase [EC:3.2.1.21]; K05349; 	NP_001330122.1 Glycosyl hydrolase family protein [Arabidopsis thaliana]
AT5G05020	0.00	0.00	5.08	1.87	AT5G05020	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_196121.1 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]
AT5G05060	37.47	38.20	10.40	21.73	AT5G05060	GO:0003674,molecular_function; 	--	NP_196125.1 Cystatin/monellin superfamily protein [Arabidopsis thaliana]
AT5G05110	145.47	132.62	716.41	643.58	AT5G05110	GO:0004869,cysteine-type endopeptidase inhibitor activity; GO:0005576,extracellular region; GO:0006952,defense response; GO:0010466,negative regulation of peptidase activity; GO:0010951,negative regulation of endopeptidase activity; GO:0030414,peptidase inhibitor activity; 	--	NP_196130.1 Cystatin/monellin family protein [Arabidopsis thaliana]
AT5G05210	29.46	37.71	54.93	52.31	AT5G05210	GO:0003677,DNA binding; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0042273,ribosomal large subunit biogenesis; GO:0042274,ribosomal small subunit biogenesis; 	--	NP_196140.1 Surfeit locus protein 6 [Arabidopsis thaliana]
AT5G05560	3.00	3.86	6.42	6.11	AT5G05560	GO:0005680,anaphase-promoting complex; GO:0016020,membrane; 	APC1; anaphase-promoting complex subunit 1; K03348; 	NP_001331419.1 E3 ubiquitin ligase [Arabidopsis thaliana]
AT5G05970	11.37	15.90	30.02	32.13	AT5G05970	GO:0000775,chromosome, centromeric region; GO:0000776,kinetochore; GO:0000919,cell plate assembly; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005694,chromosome; GO:0005737,cytoplasm; GO:0005828,kinetochore microtubule; GO:0005856,cytoskeleton; GO:0009524,phragmoplast; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0010968,regulation of microtubule nucleation; GO:0032467,positive regulation of cytokinesis; GO:0060236,regulation of mitotic spindle organization; GO:0140496,gamma-tubulin complex binding; GO:2000694,regulation of phragmoplast microtubule organization; 	--	NP_001119176.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT5G06150	14.83	14.59	9.93	4.79	AT5G06150	GO:0000079,regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0000307,cyclin-dependent protein kinase holoenzyme complex; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0007049,cell cycle; GO:0010332,response to gamma radiation; GO:0016538,cyclin-dependent protein serine/threonine kinase regulator activity; GO:0044772,mitotic cell cycle phase transition; GO:0051301,cell division; 	--	NP_196233.1 Cyclin family protein [Arabidopsis thaliana]
AT5G06290	136.74	135.23	67.88	84.23	AT5G06290	GO:0004601,peroxidase activity; GO:0005886,plasma membrane; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0010319,stromule; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0045454,cell redox homeostasis; GO:0048046,apoplast; GO:0051920,peroxiredoxin activity; GO:0098869,cellular oxidant detoxification; GO:0140824,thioredoxin-dependent peroxiredoxin activity; 	PRDX2_4, ahpC; peroxiredoxin 2/4 [EC:1.11.1.24]; K03386; 	NP_568166.1 2-cysteine peroxiredoxin B [Arabidopsis thaliana]
AT5G06350	2.31	3.52	6.02	8.56	AT5G06350	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0008150,biological_process; GO:0009506,plasmodesma; 	--	NP_001318491.1 ARM repeat superfamily protein [Arabidopsis thaliana]
AT5G06430	34.84	39.18	104.41	93.44	AT5G06430	GO:0003674,molecular_function; GO:0009507,chloroplast; GO:0009536,plastid; GO:0045454,cell redox homeostasis; 	--	NP_196261.1 Thioredoxin superfamily protein [Arabidopsis thaliana]
AT5G06460	29.27	32.88	50.61	59.42	AT5G06460	GO:0000166,nucleotide binding; GO:0004839,ubiquitin activating enzyme activity; GO:0004842,ubiquitin-protein transferase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006974,cellular response to DNA damage stimulus; GO:0008641,ubiquitin-like modifier activating enzyme activity; GO:0016567,protein ubiquitination; GO:0016874,ligase activity; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; 	UBE1, UBA1; ubiquitin-activating enzyme E1 [EC:6.2.1.45]; K03178; 	NP_568168.1 ubiquitin activating enzyme 2 [Arabidopsis thaliana]
AT5G06580	6.87	9.97	17.23	13.49	AT5G06580	GO:0003824,catalytic activity; GO:0004458,D-lactate dehydrogenase (cytochrome) activity; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005886,plasma membrane; GO:0008720,D-lactate dehydrogenase activity; GO:0016491,oxidoreductase activity; GO:0019154,glycolate dehydrogenase activity; GO:0042802,identical protein binding; GO:0050660,flavin adenine dinucleotide binding; GO:0051596,methylglyoxal catabolic process; GO:0071949,FAD binding; GO:1903457,lactate catabolic process; 	LDHD, dld; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]; K00102; 	NP_568170.1 FAD-linked oxidases family protein [Arabidopsis thaliana]
AT5G06720	6.04	5.36	15.40	11.19	AT5G06720	GO:0002215,defense response to nematode; GO:0004601,peroxidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005794,Golgi apparatus; GO:0006979,response to oxidative stress; GO:0009908,flower development; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0042744,hydrogen peroxide catabolic process; GO:0046872,metal ion binding; GO:0098869,cellular oxidant detoxification; GO:0140825,lactoperoxidase activity; 	E1.11.1.7; peroxidase [EC:1.11.1.7]; K00430; 	NP_196290.1 peroxidase 2 [Arabidopsis thaliana]
AT5G06850	16.50	22.67	8.06	7.28	AT5G06850	GO:0005515,protein binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0009506,plasmodesma; GO:0009511,plasmodesmatal endoplasmic reticulum; GO:0009908,flower development; GO:0009911,positive regulation of flower development; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0016020,membrane; GO:0048574,long-day photoperiodism, flowering; GO:0048578,positive regulation of long-day photoperiodism, flowering; GO:0070161,anchoring junction; 	--	NP_568175.2 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Arabidopsis thaliana]
AT5G06860	33.50	37.86	24.47	20.53	AT5G06860	GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005794,Golgi apparatus; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0043086,negative regulation of catalytic activity; GO:0090353,polygalacturonase inhibitor activity; GO:0099503,secretory vesicle; 	--	NP_196304.1 polygalacturonase inhibiting protein 1 [Arabidopsis thaliana]
AT5G06930	2.48	2.85	0.47	0.80	AT5G06930	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005643,nuclear pore; 	--	NP_001318495.1 nucleolar-like protein [Arabidopsis thaliana]
AT5G07110	59.74	49.05	24.88	36.65	AT5G07110	GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0016192,vesicle-mediated transport; 	--	NP_196328.1 prenylated RAB acceptor 1.B6 [Arabidopsis thaliana]
AT5G07290	13.07	9.55	22.17	20.38	AT5G07290	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0045836,positive regulation of meiotic nuclear division; GO:0045927,positive regulation of growth; GO:0051321,meiotic cell cycle; 	--	NP_196346.1 MEI2-like 4 [Arabidopsis thaliana]
AT5G07510	491.12	439.79	162.93	158.77	AT5G07510	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; 	--	NP_196368.2 glycine-rich protein 14 [Arabidopsis thaliana]
AT5G07520	189.61	205.03	69.75	61.88	AT5G07520	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; 	--	AAK83836.1 glycine-rich protein GRP18 [Arabidopsis thaliana]
AT5G07530	719.73	810.66	221.22	259.10	AT5G07530	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0009859,pollen hydration; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0031012,extracellular matrix; GO:0048544,recognition of pollen; GO:0048608,reproductive structure development; GO:0048655,anther wall tapetum morphogenesis; GO:0070505,pollen coat; 	--	ABH05945.1 hypothetical protein, partial [Phaseolus vulgaris]
AT5G07540	180.74	176.58	50.50	50.17	AT5G07540	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; GO:0070505,pollen coat; 	--	NP_850788.2 glycine-rich protein 16 [Arabidopsis thaliana]
AT5G07550	980.22	816.64	294.35	309.48	AT5G07550	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; GO:0048655,anther wall tapetum morphogenesis; GO:0070505,pollen coat; 	--	NP_196372.1 glycine-rich protein 19 [Arabidopsis thaliana]
AT5G07560	328.11	409.67	115.40	114.56	AT5G07560	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0008289,lipid binding; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; 	--	NP_196373.1 glycine-rich protein 20 [Arabidopsis thaliana]
AT5G07600	26.71	41.99	9.74	10.64	AT5G07600	GO:0005576,extracellular region; GO:0005811,lipid droplet; GO:0009791,post-embryonic development; GO:0012511,monolayer-surrounded lipid storage body; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019915,lipid storage; GO:0019953,sexual reproduction; GO:0048608,reproductive structure development; 	--	NP_196377.1 Oleosin family protein [Arabidopsis thaliana]
AT5G07940	1.94	3.26	6.63	3.79	AT5G07940	--	--	NP_001331336.1 dentin sialophosphoprotein-like protein [Arabidopsis thaliana]
AT5G08050	172.89	164.65	101.16	116.41	AT5G08050	GO:0005886,plasma membrane; GO:0009507,chloroplast; GO:0009515,granal stacked thylakoid; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009579,thylakoid; GO:0009658,chloroplast organization; GO:0010027,thylakoid membrane organization; GO:0010196,nonphotochemical quenching; GO:0016020,membrane; GO:0045893,positive regulation of DNA-templated transcription; GO:0090391,granum assembly; 	--	NP_196422.1 wiskott-aldrich syndrome family protein, putative (DUF1118) [Arabidopsis thaliana]
AT5G08090	5.08	5.58	0.00	1.34	AT5G08090	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_196426.1 transmembrane protein [Arabidopsis thaliana]
AT5G08400	8.18	12.08	27.28	26.41	AT5G08400	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_001031856.1 structural maintenance of chromosomes-like protein, putative (DUF3531) [Arabidopsis thaliana]
AT5G08420	51.20	77.73	127.98	109.56	AT5G08420	GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:1990904,ribonucleoprotein complex; 	--	NP_196459.1 RNA-binding KH domain-containing protein [Arabidopsis thaliana]
AT5G08540	84.17	86.82	60.62	51.67	AT5G08540	GO:0003674,molecular_function; GO:0005886,plasma membrane; GO:0008150,biological_process; GO:0008168,methyltransferase activity; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0032259,methylation; 	--	NP_568200.1 ribosomal RNA small subunit methyltransferase J [Arabidopsis thaliana]
AT5G08600	1.00	1.30	7.86	5.05	AT5G08600	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:1990904,ribonucleoprotein complex; 	UTP14; U3 small nucleolar RNA-associated protein 14; K14567; 	NP_001331282.1 U3 ribonucleoprotein (Utp) family protein [Arabidopsis thaliana]
AT5G09225	6.79	6.22	47.28	39.82	AT5G09225	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_974752.1 transmembrane protein [Arabidopsis thaliana]
AT5G09330	6.53	5.61	18.82	18.00	AT5G09330	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; 	--	NP_001078551.1 NAC domain containing protein 82 [Arabidopsis thaliana]
AT5G09370	23.48	14.67	5.97	6.82	AT5G09370	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0006869,lipid transport; GO:0008289,lipid binding; GO:0016020,membrane; 	--	NP_850800.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT5G09380	22.09	13.79	31.03	33.33	AT5G09380	GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005666,RNA polymerase III complex; GO:0006383,transcription by RNA polymerase III; 	RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4; K03026; 	NP_001332087.1 RNA polymerase III RPC4 [Arabidopsis thaliana]
AT5G09790	1.03	0.68	5.62	3.81	AT5G09790	GO:0003712,transcription coregulator activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006275,regulation of DNA replication; GO:0006325,chromatin organization; GO:0006351,DNA-templated transcription; GO:0008168,methyltransferase activity; GO:0009294,DNA-mediated transformation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009555,pollen development; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042393,histone binding; GO:0045892,negative regulation of DNA-templated transcription; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0046872,metal ion binding; GO:0046976,histone methyltransferase activity (H3-K27 specific); GO:0051171,regulation of nitrogen compound metabolic process; GO:0051726,regulation of cell cycle; GO:0060255,regulation of macromolecule metabolic process; GO:0070734,histone H3-K27 methylation; GO:0080090,regulation of primary metabolic process; 	--	NP_001318519.1 TRITHORAX-RELATED PROTEIN 5 [Arabidopsis thaliana]
AT5G09810	800.39	795.68	519.26	517.59	AT5G09810	GO:0000166,nucleotide binding; GO:0005200,structural constituent of cytoskeleton; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0006893,Golgi to plasma membrane transport; GO:0007010,cytoskeleton organization; GO:0008104,protein localization; GO:0009416,response to light stimulus; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009570,chloroplast stroma; GO:0009611,response to wounding; GO:0009733,response to auxin; GO:0009845,seed germination; GO:0009941,chloroplast envelope; GO:0010053,root epidermal cell differentiation; GO:0015031,protein transport; GO:0016787,hydrolase activity; GO:0048364,root development; GO:0048767,root hair elongation; GO:0051301,cell division; 	--	NP_196543.1 actin 7 [Arabidopsis thaliana]
AT5G10100	1.21	0.44	6.69	2.24	AT5G10100	GO:0003824,catalytic activity; GO:0004805,trehalose-phosphatase activity; GO:0005992,trehalose biosynthetic process; GO:0016787,hydrolase activity; 	otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]; K01087; 	NP_001318525.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]
AT5G10360	384.55	334.07	526.87	596.35	AT5G10360	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0005886,plasma membrane; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:0110165,cellular anatomical entity; GO:1990904,ribonucleoprotein complex; 	RP-S6e, RPS6; small subunit ribosomal protein S6e; K02991; 	NP_196598.1 Ribosomal protein S6e [Arabidopsis thaliana]
AT5G10490	10.91	12.37	4.80	6.80	AT5G10490	GO:0006811,ion transport; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0010020,chloroplast fission; GO:0016020,membrane; GO:0031969,chloroplast membrane; GO:0055085,transmembrane transport; 	--	NP_001190278.1 MSCS-like 2 [Arabidopsis thaliana]
AT5G11090	37.62	27.17	59.85	54.39	AT5G11090	--	--	NP_196670.1 serine-rich protein-like protein [Arabidopsis thaliana]
AT5G11280	69.54	82.16	48.74	50.96	AT5G11280	GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_568247.1 tail fiber [Arabidopsis thaliana]
AT5G11630	34.23	43.47	159.96	85.92	AT5G11630	GO:0005739,mitochondrion; GO:0006952,defense response; GO:0009617,response to bacterium; GO:0009635,response to herbicide; GO:0010311,lateral root formation; GO:0010821,regulation of mitochondrion organization; GO:0019372,lipoxygenase pathway; GO:0031407,oxylipin metabolic process; GO:0042742,defense response to bacterium; GO:0048311,mitochondrion distribution; GO:0048364,root development; GO:0050832,defense response to fungus; GO:0052543,callose deposition in cell wall; GO:0071433,cell wall repair; GO:2000023,regulation of lateral root development; GO:2000280,regulation of root development; 	--	NP_001332362.1 hypothetical protein AT5G11630 [Arabidopsis thaliana]
AT5G11900	45.92	47.45	86.48	81.39	AT5G11900	GO:0001731,formation of translation preinitiation complex; GO:0002188,translation reinitiation; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006413,translational initiation; GO:1990904,ribonucleoprotein complex; 	--	NP_196751.2 Translation initiation factor SUI1 family protein [Arabidopsis thaliana]
AT5G12350	8.20	8.30	3.14	4.30	AT5G12350	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; GO:0046872,metal ion binding; 	--	NP_568268.3 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Arabidopsis thaliana]
AT5G12940	155.35	148.37	45.36	69.19	AT5G12940	GO:0005515,protein binding; 	--	NP_196798.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT5G12980	20.28	18.43	45.43	45.88	AT5G12980	GO:0000932,P-body; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0017148,negative regulation of translation; GO:0030015,CCR4-NOT core complex; 	RCD1, CNOT9, CAF40; CCR4-NOT transcription complex subunit 9; K12606; 	NP_196802.1 Cell differentiation, Rcd1-like protein [Arabidopsis thaliana]
AT5G13210	1.74	0.89	6.17	4.29	AT5G13210	GO:0003674,molecular_function; 	--	NP_196825.1 Uncharacterized conserved protein UCP015417, vWA [Arabidopsis thaliana]
AT5G13380	68.23	59.05	35.45	40.95	AT5G13380	GO:0005737,cytoplasm; GO:0016881,acid-amino acid ligase activity; 	GH3; auxin responsive GH3 gene family; K14487; 	NP_196842.2 Auxin-responsive GH3 family protein [Arabidopsis thaliana]
AT5G13420	101.40	115.36	64.82	78.40	AT5G13420	GO:0004801,transaldolase activity; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005975,carbohydrate metabolic process; GO:0006098,pentose-phosphate shunt; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009749,response to glucose; GO:0009809,lignin biosynthetic process; 	E2.2.1.2, talA, talB; transaldolase [EC:2.2.1.2]; K00616; 	NP_196846.1 Aldolase-type TIM barrel family protein [Arabidopsis thaliana]
AT5G13510	188.35	163.51	109.94	113.20	AT5G13510	GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0015934,large ribosomal subunit; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L10, MRPL10, rplJ; large subunit ribosomal protein L10; K02864; 	NP_196855.1 Ribosomal protein L10 family protein [Arabidopsis thaliana]
AT5G13580	14.16	10.97	6.33	3.97	AT5G13580	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0009624,response to nematode; GO:0010345,suberin biosynthetic process; GO:0016020,membrane; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0140359,ABC-type transporter activity; GO:1903825,organic acid transmembrane transport; 	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2; K05681; 	NP_196862.1 ABC-2 type transporter family protein [Arabidopsis thaliana]
AT5G14020	0.00	0.20	0.79	3.05	AT5G14020	GO:0003674,molecular_function; GO:0005773,vacuole; 	--	NP_001318557.1 Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]
AT5G14050	16.99	20.24	31.67	28.55	AT5G14050	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0032040,small-subunit processome; GO:0034388,Pwp2p-containing subcomplex of 90S preribosome; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	UTP18; U3 small nucleolar RNA-associated protein 18; K14553; 	NP_196909.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT5G14320	318.30	326.17	194.56	192.28	AT5G14320	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-S13, rpsM; small subunit ribosomal protein S13; K02952; 	NP_568299.1 Ribosomal protein S13/S18 family [Arabidopsis thaliana]
AT5G14380	73.44	55.14	25.33	26.81	AT5G14380	GO:0005886,plasma membrane; GO:0009860,pollen tube growth; GO:0010208,pollen wall assembly; GO:0016020,membrane; GO:0031012,extracellular matrix; 	--	NP_196942.1 arabinogalactan protein 6 [Arabidopsis thaliana]
AT5G14440	16.53	17.28	25.34	35.04	AT5G14440	--	--	NP_001031882.1 Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana]
AT5G14520	23.65	26.72	46.82	47.22	AT5G14520	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; GO:0043021,ribonucleoprotein complex binding; GO:0070545,PeBoW complex; GO:0090069,regulation of ribosome biogenesis; GO:2000232,regulation of rRNA processing; 	--	NP_196956.1 pescadillo-like protein [Arabidopsis thaliana]
AT5G14540	18.81	12.53	27.71	24.01	AT5G14540	GO:0003674,molecular_function; GO:0042735,protein body; 	--	NP_196958.2 basic salivary proline-rich-like protein (DUF1421) [Arabidopsis thaliana]
AT5G14580	7.64	5.62	10.32	12.83	AT5G14580	GO:0000175,3'-5'-exoribonuclease activity; GO:0000957,mitochondrial RNA catabolic process; GO:0000958,mitochondrial mRNA catabolic process; GO:0000963,mitochondrial RNA processing; GO:0000965,mitochondrial RNA 3'-end processing; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0004654,polyribonucleotide nucleotidyltransferase activity; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0006401,RNA catabolic process; GO:0006402,mRNA catabolic process; GO:0008033,tRNA processing; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0016787,hydrolase activity; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090503,RNA phosphodiester bond hydrolysis, exonucleolytic; 	pnp, PNPT1; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; K00962; 	NP_196962.1 polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana]
AT5G14700	38.49	35.79	67.38	58.48	AT5G14700	GO:0005575,cellular_component; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; 	--	NP_196974.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT5G14760	23.48	33.57	15.01	10.20	AT5G14760	GO:0000166,nucleotide binding; GO:0008734,L-aspartate oxidase activity; GO:0009435,NAD biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016491,oxidoreductase activity; GO:0019363,pyridine nucleotide biosynthetic process; GO:0044318,L-aspartate:fumarate oxidoreductase activity; 	nadB; L-aspartate oxidase [EC:1.4.3.16]; K00278; 	NP_568304.1 L-aspartate oxidase [Arabidopsis thaliana]
AT5G14780	177.08	173.39	71.99	79.53	AT5G14780	GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0008863,formate dehydrogenase (NAD+) activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016491,oxidoreductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0042183,formate catabolic process; GO:0051287,NAD binding; 	FDH; formate dehydrogenase [EC:1.17.1.9]; K00122; 	NP_001330044.1 formate dehydrogenase [Arabidopsis thaliana]
AT5G15110	43.92	57.53	26.87	18.04	AT5G15110	GO:0030570,pectate lyase activity; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_197015.4 Pectate lyase family protein [Arabidopsis thaliana]
AT5G15140	59.81	59.61	27.26	26.51	AT5G15140	GO:0003824,catalytic activity; GO:0004034,aldose 1-epimerase activity; GO:0005975,carbohydrate metabolic process; GO:0006006,glucose metabolic process; GO:0016853,isomerase activity; GO:0030246,carbohydrate binding; GO:0033499,galactose catabolic process via UDP-galactose; 	galM, GALM; aldose 1-epimerase [EC:5.1.3.3]; K01785; 	NP_197018.1 Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]
AT5G15200	1420.69	1491.42	2129.82	2325.97	AT5G15200	GO:0000325,plant-type vacuole; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042274,ribosomal small subunit biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S9e, RPS9; small subunit ribosomal protein S9e; K02997; 	NP_197024.1 Ribosomal protein S4 [Arabidopsis thaliana]
AT5G15310	19.02	18.29	31.13	33.22	AT5G15310	GO:0000902,cell morphogenesis; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0035017,cuticle pattern formation; GO:1901957,regulation of cutin biosynthetic process; 	--	NP_001330733.1 myb domain protein 16 [Arabidopsis thaliana]
AT5G15350	292.98	278.84	175.55	191.41	AT5G15350	GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009055,electron transfer activity; GO:0009536,plastid; GO:0016020,membrane; GO:0022900,electron transport chain; 	--	NP_197039.1 early nodulin-like protein 17 [Arabidopsis thaliana]
AT5G15380	2.12	0.96	0.18	0.00	AT5G15380	GO:0003677,DNA binding; GO:0003886,DNA (cytosine-5-)-methyltransferase activity; GO:0005634,nucleus; GO:0006306,DNA methylation; GO:0006346,DNA methylation-dependent heterochromatin formation; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0032259,methylation; GO:0050832,defense response to fungus; GO:0051567,histone H3-K9 methylation; GO:0090116,C-5 methylation of cytosine; 	--	NP_197042.2 domains rearranged methylase 1 [Arabidopsis thaliana]
AT5G15520	41.76	37.55	69.52	70.29	AT5G15520	GO:0000028,ribosomal small subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S19e, RPS19; small subunit ribosomal protein S19e; K02966; 	NP_197056.1 Ribosomal protein S19e family protein [Arabidopsis thaliana]
AT5G15550	23.46	26.37	40.35	52.52	AT5G15550	GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009506,plasmodesma; GO:0030687,preribosome, large subunit precursor; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; GO:0043021,ribonucleoprotein complex binding; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_001332618.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT5G15750	39.26	54.41	96.50	74.28	AT5G15750	GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0019843,rRNA binding; GO:0022627,cytosolic small ribosomal subunit; GO:0030515,snoRNA binding; GO:0032040,small-subunit processome; GO:0034457,Mpp10 complex; GO:0042274,ribosomal small subunit biogenesis; GO:1990904,ribonucleoprotein complex; 	IMP3; U3 small nucleolar ribonucleoprotein protein IMP3; K14560; 	NP_568321.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [Arabidopsis thaliana]
AT5G15810	14.73	13.44	28.03	22.40	AT5G15810	GO:0000049,tRNA binding; GO:0002940,tRNA N2-guanine methylation; GO:0003723,RNA binding; GO:0004809,tRNA (guanine-N2-)-methyltransferase activity; GO:0005634,nucleus; GO:0008033,tRNA processing; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0030488,tRNA methylation; GO:0032259,methylation; 	--	CAD5331800.1 unnamed protein product [Arabidopsis thaliana]
AT5G16080	2.49	4.48	0.00	0.00	AT5G16080	GO:0005515,protein binding; GO:0005575,cellular_component; GO:0016787,hydrolase activity; GO:0052689,carboxylic ester hydrolase activity; 	--	NP_197112.1 carboxyesterase 17 [Arabidopsis thaliana]
AT5G16110	153.32	217.22	256.18	317.54	AT5G16110	GO:0003674,molecular_function; 	--	NP_568326.2 hypothetical protein AT5G16110 [Arabidopsis thaliana]
AT5G16120	16.17	15.77	25.04	28.07	AT5G16120	GO:0005829,cytosol; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0016020,membrane; GO:0016298,lipase activity; GO:0047372,acylglycerol lipase activity; 	CSE; caffeoylshikimate esterase [EC:3.1.1.-]; K18368; 	NP_001330024.1 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT5G16130	302.98	327.61	554.17	522.39	AT5G16130	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006364,rRNA processing; GO:0006412,translation; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0032040,small-subunit processome; GO:0042274,ribosomal small subunit biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S7e, RPS7; small subunit ribosomal protein S7e; K02993; 	NP_197117.1 Ribosomal protein S7e family protein [Arabidopsis thaliana]
AT5G16180	13.98	17.62	7.13	9.36	AT5G16180	GO:0000373,Group II intron splicing; GO:0000375,RNA splicing, via transesterification reactions; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0006397,mRNA processing; GO:0006417,regulation of translation; GO:0008380,RNA splicing; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:1990904,ribonucleoprotein complex; 	--	NP_001332392.1 maize chloroplast splicing factor-like protein [Arabidopsis thaliana]
AT5G16350	2.32	1.19	10.94	1.43	AT5G16350	GO:0004144,diacylglycerol O-acyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005886,plasma membrane; GO:0008374,O-acyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0019432,triglyceride biosynthetic process; GO:0045017,glycerolipid biosynthetic process; GO:0047196,long-chain-alcohol O-fatty-acyltransferase activity; GO:0102966,arachidoyl-CoA:1-dodecanol O-acyltransferase activity; 	--	NP_001332615.1 O-acyltransferase (WSD1-like) family protein [Arabidopsis thaliana]
AT5G16370	26.41	28.72	14.44	15.95	AT5G16370	GO:0005777,peroxisome; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0016874,ligase activity; 	--	NP_197141.1 acyl activating enzyme 5 [Arabidopsis thaliana]
AT5G16400	75.58	49.84	13.91	30.32	AT5G16400	GO:0005515,protein binding; GO:0008047,enzyme activator activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009642,response to light intensity; GO:0043085,positive regulation of catalytic activity; GO:0045454,cell redox homeostasis; 	trxA; thioredoxin 1; K03671; 	NP_197144.1 thioredoxin F2 [Arabidopsis thaliana]
AT5G16510	76.53	89.28	46.09	44.75	AT5G16510	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005829,cytosol; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0009832,plant-type cell wall biogenesis; GO:0016740,transferase activity; GO:0016853,isomerase activity; GO:0016866,intramolecular transferase activity; GO:0033356,UDP-L-arabinose metabolic process; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; 	RGP, UTM; reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]; K13379; 	NP_197155.1 Alpha-1,4-glucan-protein synthase family protein [Arabidopsis thaliana]
AT5G16750	30.90	28.77	59.00	63.32	AT5G16750	GO:0000472,endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000480,endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0009793,embryo development ending in seed dormancy; GO:0009880,embryonic pattern specification; GO:0030686,90S preribosome; GO:0032040,small-subunit processome; GO:0034511,U3 snoRNA binding; GO:0051301,cell division; 	UTP13, TBL3; U3 small nucleolar RNA-associated protein 13; K14555; 	NP_568338.2 Transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]
AT5G16920	66.55	57.78	33.26	29.82	AT5G16920	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_568341.1 Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana]
AT5G16930	8.23	8.65	13.78	15.02	AT5G16930	GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0007005,mitochondrion organization; GO:0016887,ATP hydrolysis activity; 	--	NP_197195.2 AAA-type ATPase family protein [Arabidopsis thaliana]
AT5G16960	196.25	190.96	87.52	101.68	AT5G16960	GO:0006979,response to oxidative stress; GO:0009536,plastid; GO:0016491,oxidoreductase activity; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0032440,2-alkenal reductase [NAD(P)+] activity; 	E1.3.1.74; 2-alkenal reductase [EC:1.3.1.74]; K08070; 	NP_001318576.1 Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]
AT5G17090	12.51	10.03	2.92	0.00	AT5G17090	--	--	NP_197211.1 Cystatin/monellin superfamily protein [Arabidopsis thaliana]
AT5G17920	1941.30	1921.77	1100.01	1102.09	AT5G17920	GO:0000325,plant-type vacuole; GO:0003729,mRNA binding; GO:0003871,5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity; GO:0005507,copper ion binding; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006346,DNA methylation-dependent heterochromatin formation; GO:0008168,methyltransferase activity; GO:0008172,S-methyltransferase activity; GO:0008270,zinc ion binding; GO:0008652,cellular amino acid biosynthetic process; GO:0008705,methionine synthase activity; GO:0009086,methionine biosynthetic process; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0010043,response to zinc ion; GO:0016740,transferase activity; GO:0032259,methylation; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0051574,positive regulation of histone H3-K9 methylation; GO:0071266,'de novo' L-methionine biosynthetic process; 	metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]; K00549; 	NP_001078599.1 Cobalamin-independent synthase family protein [Arabidopsis thaliana]
AT5G17990	34.05	29.51	66.48	60.44	AT5G17990	GO:0000162,tryptophan biosynthetic process; GO:0004048,anthranilate phosphoribosyltransferase activity; GO:0005829,cytosol; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016763,pentosyltransferase activity; GO:0046872,metal ion binding; 	trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]; K00766; 	NP_197300.1 tryptophan biosynthesis 1 [Arabidopsis thaliana]
AT5G18100	35.44	35.41	77.57	82.67	AT5G18100	GO:0000325,plant-type vacuole; GO:0004784,superoxide dismutase activity; GO:0005507,copper ion binding; GO:0005777,peroxisome; GO:0006801,superoxide metabolic process; GO:0006979,response to oxidative stress; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0019430,removal of superoxide radicals; GO:0046872,metal ion binding; GO:0071457,cellular response to ozone; GO:0071472,cellular response to salt stress; GO:0071484,cellular response to light intensity; GO:0071486,cellular response to high light intensity; GO:0071493,cellular response to UV-B; GO:0098869,cellular oxidant detoxification; 	SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]; K04565; 	NP_197311.1 copper/zinc superoxide dismutase 3 [Arabidopsis thaliana]
AT5G18310	74.38	63.87	109.80	126.53	AT5G18310	GO:0003674,molecular_function; GO:0016787,hydrolase activity; 	--	NP_001331858.1 ubiquitin hydrolase [Arabidopsis thaliana]
AT5G18500	61.67	54.51	34.32	44.42	AT5G18500	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0005575,cellular_component; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016020,membrane; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0106310,protein serine kinase activity; 	--	NP_001031898.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT5G18550	16.16	10.62	6.72	5.86	AT5G18550	GO:0003677,DNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0008150,biological_process; GO:0046872,metal ion binding; 	--	NP_197356.2 Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis thaliana]
AT5G18660	44.28	44.97	28.79	25.95	AT5G18660	GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0015995,chlorophyll biosynthetic process; GO:0016491,oxidoreductase activity; GO:0033728,divinyl chlorophyllide a 8-vinyl-reductase activity; GO:0051744,3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; 	DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]; K19073; 	NP_197367.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT5G18748	13.39	6.13	48.21	74.37	AT5G18748	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001119250.1 hypothetical protein AT5G18748 [Arabidopsis thaliana]
AT5G18800	70.07	92.25	130.35	147.31	AT5G18800	GO:0005739,mitochondrion; GO:0005747,mitochondrial respiratory chain complex I; GO:0005758,mitochondrial intermembrane space; GO:0006120,mitochondrial electron transport, NADH to ubiquinone; GO:0009536,plastid; GO:0070469,respirasome; 	NDUFA8; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8; K03952; 	NP_197381.1 Cox19-like CHCH family protein [Arabidopsis thaliana]
AT5G19070	23.10	34.04	18.28	13.16	AT5G19070	GO:0003674,molecular_function; GO:0016020,membrane; GO:0016021,integral component of membrane; 	--	NP_197408.2 SNARE associated Golgi protein family [Arabidopsis thaliana]
AT5G19310	3.52	3.63	7.29	6.92	AT5G19310	GO:0000166,nucleotide binding; GO:0003677,DNA binding; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0008094,ATP-dependent activity, acting on DNA; GO:0009826,unidimensional cell growth; GO:0010078,maintenance of root meristem identity; GO:0010231,maintenance of seed dormancy; GO:0010492,maintenance of shoot apical meristem identity; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0031490,chromatin DNA binding; GO:0042393,histone binding; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0140658,ATP-dependent chromatin remodeler activity; 	--	NP_197432.2 homeotic protein regulator [Arabidopsis thaliana]
AT5G19340	9.47	11.70	21.30	26.84	AT5G19340	GO:0005515,protein binding; 	--	NP_197435.2 hypothetical protein AT5G19340 [Arabidopsis thaliana]
AT5G19530	36.75	50.49	25.14	21.69	AT5G19530	GO:0003824,catalytic activity; GO:0005737,cytoplasm; GO:0006596,polyamine biosynthetic process; GO:0009926,auxin polar transport; GO:0010087,phloem or xylem histogenesis; GO:0010487,thermospermine synthase activity; GO:0016740,transferase activity; GO:0016768,spermine synthase activity; GO:0048759,xylem vessel member cell differentiation; 	ACL5; thermospermine synthase [EC:2.5.1.79]; K18787; 	NP_568376.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT5G19550	91.37	93.23	67.88	52.00	AT5G19550	GO:0000325,plant-type vacuole; GO:0003824,catalytic activity; GO:0004069,L-aspartate:2-oxoglutarate aminotransferase activity; GO:0005507,copper ion binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006103,2-oxoglutarate metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006531,aspartate metabolic process; GO:0006536,glutamate metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008483,transaminase activity; GO:0009058,biosynthetic process; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0016740,transferase activity; GO:0030170,pyridoxal phosphate binding; GO:0071456,cellular response to hypoxia; 	GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1]; K14454; 	NP_197456.1 aspartate aminotransferase 2 [Arabidopsis thaliana]
AT5G19760	234.55	237.41	143.71	118.97	AT5G19760	GO:0000325,plant-type vacuole; GO:0005310,dicarboxylic acid transmembrane transporter activity; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0006835,dicarboxylic acid transport; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0015142,tricarboxylic acid transmembrane transporter activity; GO:0016020,membrane; GO:0022857,transmembrane transporter activity; GO:0035674,tricarboxylic acid transmembrane transport; GO:0055085,transmembrane transport; 	--	NP_197477.1 Mitochondrial substrate carrier family protein [Arabidopsis thaliana]
AT5G19855	38.32	38.51	73.59	73.65	AT5G19855	GO:0006457,protein folding; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0015977,carbon fixation; GO:0015979,photosynthesis; GO:0044183,protein folding chaperone; GO:0061077,chaperone-mediated protein folding; GO:0110102,ribulose bisphosphate carboxylase complex assembly; 	--	NP_001330979.1 Chaperonin-like RbcX protein [Arabidopsis thaliana]
AT5G19940	90.63	108.42	65.27	68.50	AT5G19940	GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010287,plastoglobule; 	--	NP_197494.1 Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana]
AT5G20020	117.14	117.93	218.38	220.81	AT5G20020	GO:0000054,ribosomal subunit export from nucleus; GO:0000166,nucleotide binding; GO:0003729,mRNA binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0006606,protein import into nucleus; GO:0006913,nucleocytoplasmic transport; GO:0009536,plastid; GO:0015031,protein transport; 	RAN; GTP-binding nuclear protein Ran; K07936; 	NP_197502.1 RAS-related GTP-binding nuclear protein 2 [Arabidopsis thaliana]
AT5G20040	16.28	14.98	27.04	27.07	AT5G20040	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0006400,tRNA modification; GO:0008033,tRNA processing; GO:0009691,cytokinin biosynthetic process; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; GO:0052381,tRNA dimethylallyltransferase activity; 	miaA, TRIT1; tRNA dimethylallyltransferase [EC:2.5.1.75]; K00791; 	NP_851043.1 isopentenyltransferase 9 [Arabidopsis thaliana]
AT5G20080	76.91	84.27	51.63	52.74	AT5G20080	GO:0004128,cytochrome-b5 reductase activity, acting on NAD(P)H; GO:0005507,copper ion binding; GO:0005739,mitochondrion; GO:0005758,mitochondrial intermembrane space; GO:0005794,Golgi apparatus; GO:0009505,plant-type cell wall; GO:0009536,plastid; GO:0016491,oxidoreductase activity; 	E1.6.2.2; cytochrome-b5 reductase [EC:1.6.2.2]; K00326; 	NP_568391.1 FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
AT5G20160	158.59	146.39	348.49	305.18	AT5G20160	GO:0000398,mRNA splicing, via spliceosome; GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0009536,plastid; GO:0016020,membrane; GO:0030490,maturation of SSU-rRNA; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; GO:0046540,U4/U6 x U5 tri-snRNP complex; GO:0071011,precatalytic spliceosome; GO:1990904,ribonucleoprotein complex; 	SNU13, NHP2L; U4/U6 small nuclear ribonucleoprotein SNU13; K12845; 	NP_197516.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana]
AT5G20165	85.13	78.60	56.90	36.57	AT5G20165	GO:0000139,Golgi membrane; GO:0003674,molecular_function; GO:0009306,protein secretion; GO:0016020,membrane; GO:0046907,intracellular transport; 	--	NP_001078607.1 kish-A-like protein [Arabidopsis thaliana]
AT5G20200	20.78	31.16	79.31	50.41	AT5G20200	GO:0005515,protein binding; GO:0005635,nuclear envelope; GO:0071763,nuclear membrane organization; 	--	NP_197520.1 nucleoporin-like protein [Arabidopsis thaliana]
AT5G20230	142.32	143.35	113.05	75.61	AT5G20230	GO:0000325,plant-type vacuole; GO:0002239,response to oomycetes; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0006979,response to oxidative stress; GO:0009055,electron transfer activity; GO:0009536,plastid; GO:0009646,response to absence of light; GO:0015690,aluminum cation transport; GO:0016020,membrane; GO:0022900,electron transport chain; GO:0046872,metal ion binding; GO:0070417,cellular response to cold; GO:0071456,cellular response to hypoxia; GO:1901141,regulation of lignin biosynthetic process; 	--	NP_197523.1 blue-copper-binding protein [Arabidopsis thaliana]
AT5G20290	912.29	975.75	1844.11	1885.69	AT5G20290	GO:0000462,maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S8e, RPS8; small subunit ribosomal protein S8e; K02995; 	NP_197529.1 Ribosomal protein S8e family protein [Arabidopsis thaliana]
AT5G20570	57.72	57.58	113.18	86.22	AT5G20570	GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0008270,zinc ion binding; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0009753,response to jasmonic acid; GO:0009867,jasmonic acid mediated signaling pathway; GO:0016567,protein ubiquitination; GO:0019005,SCF ubiquitin ligase complex; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0097602,cullin family protein binding; 	RBX1, ROC1; RING-box protein 1 [EC:2.3.2.32]; K03868; 	NP_568396.1 RING-box 1 [Arabidopsis thaliana]
AT5G20600	24.62	21.74	38.83	33.91	AT5G20600	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0006364,rRNA processing; GO:0030687,preribosome, large subunit precursor; GO:0030688,preribosome, small subunit precursor; 	--	NP_197560.2 ribosomal RNA processing-like protein [Arabidopsis thaliana]
AT5G20630	911.00	997.23	533.23	544.99	AT5G20630	GO:0005576,extracellular region; GO:0005634,nucleus; GO:0009536,plastid; GO:0030145,manganese ion binding; GO:0031012,extracellular matrix; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0099503,secretory vesicle; 	--	NP_197563.1 germin 3 [Arabidopsis thaliana]
AT5G20670	14.20	7.25	23.37	29.11	AT5G20670	--	--	NP_197567.1 DUF1677 family protein (DUF1677) [Arabidopsis thaliana]
AT5G20710	81.31	86.87	52.23	61.20	AT5G20710	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565,beta-galactosidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0030246,carbohydrate binding; GO:0048046,apoplast; 	--	NP_568399.4 beta-galactosidase 7 [Arabidopsis thaliana]
AT5G21482	21.12	31.72	15.43	15.70	AT5G21482	GO:0003824,catalytic activity; GO:0009690,cytokinin metabolic process; GO:0009823,cytokinin catabolic process; GO:0016491,oxidoreductase activity; GO:0019139,cytokinin dehydrogenase activity; GO:0050660,flavin adenine dinucleotide binding; GO:0071949,FAD binding; 	CKX; cytokinin dehydrogenase [EC:1.5.99.12]; K00279; 	NP_850863.1 cytokinin oxidase 7 [Arabidopsis thaliana]
AT5G21920	38.84	36.93	23.53	20.55	AT5G21920	GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0010020,chloroplast fission; GO:0016020,membrane; GO:0090143,nucleoid organization; 	--	NP_680180.1 YGGT family protein [Arabidopsis thaliana]
AT5G22020	52.26	65.03	36.07	30.67	AT5G22020	GO:0005773,vacuole; GO:0005783,endoplasmic reticulum; GO:0009058,biosynthetic process; GO:0016844,strictosidine synthase activity; 	--	NP_001331596.1 Calcium-dependent phosphotriesterase superfamily protein [Arabidopsis thaliana]
AT5G22100	33.23	39.04	70.00	65.76	AT5G22100	GO:0000479,endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003824,catalytic activity; GO:0004521,endoribonuclease activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006396,RNA processing; GO:0042254,ribosome biogenesis; 	RCL1; RNA 3'-terminal phosphate cyclase-like protein; K11108; 	NP_680196.1 RNA cyclase family protein [Arabidopsis thaliana]
AT5G22120	24.81	25.93	40.13	42.93	AT5G22120	GO:0003676,nucleic acid binding; GO:0008150,biological_process; 	--	NP_680198.1 coiled-coil protein [Arabidopsis thaliana]
AT5G22200	19.25	17.09	6.93	8.22	AT5G22200	GO:0005886,plasma membrane; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0098542,defense response to other organism; 	--	NP_680206.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Arabidopsis thaliana]
AT5G22400	9.36	8.64	20.71	25.08	AT5G22400	GO:0003674,molecular_function; GO:0005096,GTPase activator activity; GO:0007165,signal transduction; GO:0050790,regulation of catalytic activity; 	--	NP_197632.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [Arabidopsis thaliana]
AT5G22430	1751.98	1330.20	905.71	1077.43	AT5G22430	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_568418.1 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]
AT5G22440	96.01	103.55	184.20	159.86	AT5G22440	GO:0000470,maturation of LSU-rRNA; GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L10Ae, RPL10A; large subunit ribosomal protein L10Ae; K02865; 	NP_001078612.1 Ribosomal protein L1p/L10e family [Arabidopsis thaliana]
AT5G22630	40.15	31.23	20.33	23.08	AT5G22630	GO:0004664,prephenate dehydratase activity; GO:0005737,cytoplasm; GO:0006952,defense response; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009094,L-phenylalanine biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016829,lyase activity; GO:0047769,arogenate dehydratase activity; 	ADT, PDT; arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51]; K05359; 	NP_197655.1 arogenate dehydratase 5 [Arabidopsis thaliana]
AT5G23060	97.89	104.06	67.89	56.08	AT5G23060	GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009704,de-etiolation; GO:0016020,membrane; GO:0071277,cellular response to calcium ion; GO:0090333,regulation of stomatal closure; 	--	NP_197697.1 calcium sensing receptor [Arabidopsis thaliana]
AT5G23070	9.93	8.80	21.86	19.42	AT5G23070	GO:0000166,nucleotide binding; GO:0004797,thymidine kinase activity; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0009157,deoxyribonucleoside monophosphate biosynthetic process; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0042802,identical protein binding; GO:0046104,thymidine metabolic process; GO:0046872,metal ion binding; GO:0071897,DNA biosynthetic process; GO:0090351,seedling development; 	tdk, TK; thymidine kinase [EC:2.7.1.21]; K00857; 	NP_568426.1 Thymidine kinase [Arabidopsis thaliana]
AT5G23140	72.29	70.94	53.45	37.64	AT5G23140	GO:0004176,ATP-dependent peptidase activity; GO:0004252,serine-type endopeptidase activity; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006508,proteolysis; GO:0006515,protein quality control for misfolded or incompletely synthesized proteins; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0008270,zinc ion binding; GO:0009368,endopeptidase Clp complex; GO:0009532,plastid stroma; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009840,chloroplastic endopeptidase Clp complex; GO:0016787,hydrolase activity; GO:0050897,cobalt ion binding; GO:0051117,ATPase binding; 	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; K01358; 	NP_568427.1 nuclear-encoded CLP protease P7 [Arabidopsis thaliana]
AT5G23170	5.25	4.27	0.99	0.85	AT5G23170	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004714,transmembrane receptor protein tyrosine kinase activity; GO:0005524,ATP binding; GO:0005886,plasma membrane; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0018108,peptidyl-tyrosine phosphorylation; GO:0106310,protein serine kinase activity; 	--	NP_197708.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT5G23240	30.50	23.58	40.55	44.68	AT5G23240	GO:0009507,chloroplast; GO:0009536,plastid; 	--	NP_197715.1 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]
AT5G23420	91.50	85.73	155.55	130.53	AT5G23420	GO:0000741,karyogamy; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0010197,polar nucleus fusion; 	--	KAG7603202.1 High mobility group box domain [Arabidopsis thaliana x Arabidopsis arenosa]
AT5G23460	3.49	3.83	22.09	11.62	AT5G23460	--	--	NP_568433.1 hypothetical protein AT5G23460 [Arabidopsis thaliana]
AT5G23740	125.93	167.92	283.32	255.77	AT5G23740	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0019843,rRNA binding; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S11e, RPS11; small subunit ribosomal protein S11e; K02949; 	NP_197763.1 ribosomal protein S11-beta [Arabidopsis thaliana]
AT5G23850	13.52	12.65	27.55	23.70	AT5G23850	GO:0003674,molecular_function; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0016020,membrane; GO:0016740,transferase activity; 	--	NP_197774.1 O-glucosyltransferase rumi-like protein (DUF821) [Arabidopsis thaliana]
AT5G23960	14.79	14.40	7.71	7.30	AT5G23960	GO:0000287,magnesium ion binding; GO:0005737,cytoplasm; GO:0008299,isoprenoid biosynthetic process; GO:0010333,terpene synthase activity; GO:0016102,diterpenoid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016829,lyase activity; GO:0046872,metal ion binding; GO:0051762,sesquiterpene biosynthetic process; GO:0080016,(-)-E-beta-caryophyllene synthase activity; GO:0080017,alpha-humulene synthase activity; GO:0080027,response to herbivore; 	TPS21; alpha-humulene/beta-caryophyllene synthase [EC:4.2.3.104 4.2.3.57]; K14184; 	NP_197784.2 terpene synthase 21 [Arabidopsis thaliana]
AT5G24150	60.12	59.27	36.99	39.16	AT5G24150	GO:0004506,squalene monooxygenase activity; GO:0005783,endoplasmic reticulum; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016126,sterol biosynthetic process; GO:0016491,oxidoreductase activity; GO:0050660,flavin adenine dinucleotide binding; 	SQLE, ERG1; squalene monooxygenase [EC:1.14.14.17]; K00511; 	NP_197803.1 FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]
AT5G24280	7.72	8.27	28.42	21.25	AT5G24280	GO:0000724,double-strand break repair via homologous recombination; GO:0005634,nucleus; GO:0006281,DNA repair; GO:0006974,cellular response to DNA damage stimulus; 	--	NP_001330245.1 gamma-irradiation and mitomycin c induced 1 [Arabidopsis thaliana]
AT5G24460	2.85	4.28	13.08	9.61	AT5G24460	--	--	NP_197834.1 RING-H2 zinc finger protein [Arabidopsis thaliana]
AT5G24490	130.41	148.34	92.10	83.30	AT5G24490	GO:0003729,mRNA binding; GO:0005840,ribosome; GO:0006417,regulation of translation; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0022627,cytosolic small ribosomal subunit; GO:0043022,ribosome binding; GO:0043024,ribosomal small subunit binding; GO:0044238,primary metabolic process; GO:0045900,negative regulation of translational elongation; 	--	NP_568447.1 30S ribosomal protein [Arabidopsis thaliana]
AT5G24820	9.38	7.15	1.93	2.13	AT5G24820	GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; 	--	NP_568459.1 Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]
AT5G24910	2.00	4.54	12.11	7.65	AT5G24910	GO:0004497,monooxygenase activity; GO:0005506,iron ion binding; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0020037,heme binding; GO:0046872,metal ion binding; 	--	NP_568463.1 cytochrome P450, family 714, subfamily A, polypeptide 1 [Arabidopsis thaliana]
AT5G25460	707.09	732.85	514.99	445.15	AT5G25460	GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0010015,root morphogenesis; 	--	NP_197928.1 transmembrane protein, putative (Protein of unknown function, DUF642) [Arabidopsis thaliana]
AT5G25760	105.28	114.08	260.56	177.55	AT5G25760	GO:0000166,nucleotide binding; GO:0000209,protein polyubiquitination; GO:0004842,ubiquitin-protein transferase activity; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005778,peroxisomal membrane; GO:0006635,fatty acid beta-oxidation; GO:0007031,peroxisome organization; GO:0015031,protein transport; GO:0016020,membrane; GO:0016558,protein import into peroxisome matrix; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0061631,ubiquitin conjugating enzyme activity; 	--	NP_001031939.1 peroxin4 [Arabidopsis thaliana]
AT5G25800	3.70	3.01	8.49	7.61	AT5G25800	GO:0003676,nucleic acid binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0005634,nucleus; GO:0016740,transferase activity; GO:0016787,hydrolase activity; GO:0090305,nucleic acid phosphodiester bond hydrolysis; 	REX1, REXO1, RNH70; RNA exonuclease 1 [EC:3.1.-.-]; K14570; 	NP_197952.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana]
AT5G25950	2.16	1.78	0.00	0.00	AT5G25950	GO:0003674,molecular_function; 	--	NP_197967.2 AslB, putative (DUF239) [Arabidopsis thaliana]
AT5G26000	1894.87	1932.56	3224.80	3209.15	AT5G26000	GO:0000325,plant-type vacuole; GO:0002213,defense response to insect; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005773,vacuole; GO:0005777,peroxisome; GO:0005975,carbohydrate metabolic process; GO:0006952,defense response; GO:0008152,metabolic process; GO:0008422,beta-glucosidase activity; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009625,response to insect; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0010119,regulation of stomatal movement; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0019137,thioglucosidase activity; GO:0019762,glucosinolate catabolic process; GO:0022626,cytosolic ribosome; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0099503,secretory vesicle; GO:0102483,scopolin beta-glucosidase activity; GO:0102799,glucosinolate glucohydrolase activity; 	E3.2.1.147; myrosinase [EC:3.2.1.147]; K01237; 	NP_851077.1 thioglucoside glucohydrolase 1 [Arabidopsis thaliana]
AT5G26730	74.90	51.37	23.83	29.03	AT5G26730	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_850872.1 Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana]
AT5G27120	48.70	57.06	111.22	106.69	AT5G27120	GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0009506,plasmodesma; GO:0030515,snoRNA binding; GO:0031428,box C/D RNP complex; GO:0032040,small-subunit processome; GO:0042254,ribosome biogenesis; 	NOP58; nucleolar protein 58; K14565; 	NP_198064.1 NOP56-like pre RNA processing ribonucleoprotein [Arabidopsis thaliana]
AT5G27350	7.23	11.57	22.26	21.61	AT5G27350	GO:0008643,carbohydrate transport; GO:0009624,response to nematode; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_568493.1 Major facilitator superfamily protein [Arabidopsis thaliana]
AT5G27430	21.85	34.74	16.74	7.75	AT5G27430	GO:0005783,endoplasmic reticulum; GO:0005787,signal peptidase complex; GO:0005789,endoplasmic reticulum membrane; GO:0006465,signal peptide processing; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031090,organelle membrane; GO:0045047,protein targeting to ER; 	SPCS3, SPC3; signal peptidase complex subunit 3 [EC:3.4.-.-]; K12948; 	NP_198095.1 Signal peptidase subunit [Arabidopsis thaliana]
AT5G27495	15.43	16.96	0.00	0.00	AT5G27495	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001031952.1 Defensin-like (DEFL) family protein [Arabidopsis thaliana]
AT5G27700	223.00	247.16	360.49	383.29	AT5G27700	GO:0000447,endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000461,endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003735,structural constituent of ribosome; GO:0005634,nucleus; GO:0005829,cytosol; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S21e, RPS21; small subunit ribosomal protein S21e; K02971; 	NP_198122.4 Ribosomal protein S21e [Arabidopsis thaliana]
AT5G27770	436.09	382.48	581.31	741.53	AT5G27770	GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005730,nucleolus; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0022625,cytosolic large ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-L22e, RPL22; large subunit ribosomal protein L22e; K02891; 	NP_198129.1 Ribosomal L22e protein family [Arabidopsis thaliana]
AT5G27870	10.44	11.94	4.45	3.16	AT5G27870	GO:0004857,enzyme inhibitor activity; GO:0016020,membrane; GO:0016787,hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0043086,negative regulation of catalytic activity; GO:0045330,aspartyl esterase activity; GO:0045490,pectin catabolic process; GO:0046910,pectinesterase inhibitor activity; 	E3.1.1.11; pectinesterase [EC:3.1.1.11]; K01051; 	NP_198139.1 Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]
AT5G27930	39.83	46.37	62.46	70.12	AT5G27930	GO:0000226,microtubule cytoskeleton organization; GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0006470,protein dephosphorylation; GO:0009819,drought recovery; GO:0016787,hydrolase activity; GO:0017018,myosin phosphatase activity; GO:0035970,peptidyl-threonine dephosphorylation; GO:0045926,negative regulation of growth; GO:0046872,metal ion binding; 	--	NP_568503.1 Protein phosphatase 2C family protein [Arabidopsis thaliana]
AT5G28060	393.40	361.92	598.51	603.24	AT5G28060	GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S24e, RPS24; small subunit ribosomal protein S24e; K02974; 	NP_198158.1 Ribosomal protein S24e family protein [Arabidopsis thaliana]
AT5G28150	4.85	6.81	12.80	14.96	AT5G28150	--	--	NP_198167.1 hypothetical protein (DUF868) [Arabidopsis thaliana]
AT5G28500	61.76	59.00	33.10	34.24	AT5G28500	GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0110102,ribulose bisphosphate carboxylase complex assembly; 	--	NP_198202.1 rubisco accumulation factor-like protein [Arabidopsis thaliana]
AT5G30490	33.94	39.11	57.43	61.01	AT5G30490	GO:0003674,molecular_function; GO:0005634,nucleus; GO:0006338,chromatin remodeling; 	--	NP_001078630.1 craniofacial development-like protein [Arabidopsis thaliana]
AT5G30510	336.36	367.01	199.34	200.09	AT5G30510	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0022627,cytosolic small ribosomal subunit; GO:1990904,ribonucleoprotein complex; 	RP-S1, rpsA; small subunit ribosomal protein S1; K02945; 	NP_850903.1 ribosomal protein S1 [Arabidopsis thaliana]
AT5G35480	4.00	4.40	57.68	29.66	AT5G35480	GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_001331310.1 hypothetical protein AT5G35480 [Arabidopsis thaliana]
AT5G35660	1.59	0.25	6.21	7.15	AT5G35660	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_001154749.1 Glycine-rich protein family [Arabidopsis thaliana]
AT5G35910	16.77	22.37	30.61	29.55	AT5G35910	GO:0000166,nucleotide binding; GO:0000175,3'-5'-exoribonuclease activity; GO:0000176,nuclear exosome (RNase complex); GO:0000467,exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003676,nucleic acid binding; GO:0003727,single-stranded RNA binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0006139,nucleobase-containing compound metabolic process; GO:0006364,rRNA processing; GO:0008408,3'-5' exonuclease activity; GO:0016787,hydrolase activity; GO:0031047,gene silencing by RNA; GO:0043633,polyadenylation-dependent RNA catabolic process; GO:0044237,cellular metabolic process; GO:0071035,nuclear polyadenylation-dependent rRNA catabolic process; GO:0071036,nuclear polyadenylation-dependent snoRNA catabolic process; GO:0071037,nuclear polyadenylation-dependent snRNA catabolic process; GO:0071038,nuclear polyadenylation-dependent tRNA catabolic process; GO:0071039,nuclear polyadenylation-dependent CUT catabolic process; GO:0071040,nuclear polyadenylation-dependent antisense transcript catabolic process; GO:0071044,histone mRNA catabolic process; GO:0071051,polyadenylation-dependent snoRNA 3'-end processing; GO:0080188,gene silencing by RNA-directed DNA methylation; GO:1902466,positive regulation of histone H3-K27 trimethylation; 	RRP6, EXOSC10; exosome complex exonuclease RRP6 [EC:3.1.13.-]; K12591; 	NP_198440.2 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein [Arabidopsis thaliana]
AT5G35926	0.00	0.00	1.81	0.67	AT5G35926	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_001318678.1 Protein with RNI-like/FBD-like domain [Arabidopsis thaliana]
AT5G36210	28.31	27.48	37.39	47.87	AT5G36210	GO:0006508,proteolysis; GO:0008236,serine-type peptidase activity; GO:0009507,chloroplast; GO:0009536,plastid; 	--	NP_198470.3 alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]
AT5G36930	1.50	2.87	0.66	0.73	AT5G36930	GO:0006952,defense response; GO:0007165,signal transduction; GO:0016020,membrane; GO:0043531,ADP binding; 	--	NP_001330640.1 Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]
AT5G37320	0.64	0.00	2.78	2.68	AT5G37320	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_198548.1 hypothetical protein (DUF674) [Arabidopsis thaliana]
AT5G38050	3.32	2.44	20.34	9.74	AT5G38050	GO:0003711,transcription elongation factor activity; GO:0003746,translation elongation factor activity; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006368,transcription elongation by RNA polymerase II promoter; GO:0006414,translational elongation; GO:0008023,transcription elongation factor complex; GO:0032783,super elongation complex; 	--	NP_198621.1 RNA polymerase II transcription elongation factor [Arabidopsis thaliana]
AT5G38330	8.89	9.07	1.83	0.00	AT5G38330	GO:0005576,extracellular region; GO:0006952,defense response; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_198649.2 low-molecular-weight cysteine-rich 80 [Arabidopsis thaliana]
AT5G38710	23.51	17.94	9.64	14.21	AT5G38710	GO:0004657,proline dehydrogenase activity; GO:0005739,mitochondrion; GO:0006560,proline metabolic process; GO:0006562,proline catabolic process; GO:0006970,response to osmotic stress; GO:0009414,response to water deprivation; GO:0010133,proline catabolic process to glutamate; GO:0016491,oxidoreductase activity; GO:0071949,FAD binding; 	PRODH, fadM, putB; proline dehydrogenase [EC:1.5.5.2]; K00318; 	NP_198687.1 Methylenetetrahydrofolate reductase family protein [Arabidopsis thaliana]
AT5G38890	15.46	17.44	35.74	41.42	AT5G38890	GO:0000176,nuclear exosome (RNase complex); GO:0000178,exosome (RNase complex); GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005737,cytoplasm; GO:0006396,RNA processing; GO:0009536,plastid; 	CSL4, EXOSC1; exosome complex component CSL4; K07573; 	NP_568559.2 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
AT5G39570	387.05	373.95	222.35	235.78	AT5G39570	GO:0016020,membrane; 	--	NP_001318706.1 transmembrane protein [Arabidopsis thaliana]
AT5G39760	20.75	28.95	39.96	50.50	AT5G39760	GO:0000976,transcription cis-regulatory region binding; GO:0001173,DNA-templated transcriptional start site selection; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009637,response to blue light; GO:0009739,response to gibberellin; GO:0009740,gibberellic acid mediated signaling pathway; GO:0042803,protein homodimerization activity; GO:0045893,positive regulation of DNA-templated transcription; GO:0046872,metal ion binding; 	--	NP_568570.1 homeobox protein 23 [Arabidopsis thaliana]
AT5G39850	31.55	27.74	76.69	70.84	AT5G39850	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005840,ribosome; GO:0006412,translation; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0015935,small ribosomal subunit; GO:0019843,rRNA binding; GO:0022627,cytosolic small ribosomal subunit; GO:0042274,ribosomal small subunit biogenesis; GO:1990904,ribonucleoprotein complex; 	RP-S9e, RPS9; small subunit ribosomal protein S9e; K02997; 	NP_198801.1 Ribosomal protein S4 [Arabidopsis thaliana]
AT5G39950	201.65	192.81	114.16	152.16	AT5G39950	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0015035,protein-disulfide reductase activity; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0016712,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; 	trxA; thioredoxin 1; K03671; 	NP_198811.1 thioredoxin 2 [Arabidopsis thaliana]
AT5G40170	30.53	27.71	20.28	18.96	AT5G40170	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0016020,membrane; 	--	NP_198833.1 receptor like protein 54 [Arabidopsis thaliana]
AT5G40200	34.37	45.16	72.46	56.82	AT5G40200	GO:0004252,serine-type endopeptidase activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0043231,intracellular membrane-bounded organelle; 	--	NP_568577.1 DegP protease 9 [Arabidopsis thaliana]
AT5G40260	22.01	28.81	6.99	7.79	AT5G40260	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0008643,carbohydrate transport; GO:0009555,pollen development; GO:0010208,pollen wall assembly; GO:0010584,pollen exine formation; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; GO:0051260,protein homooligomerization; GO:0052543,callose deposition in cell wall; 	--	NP_568579.1 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT5G40500	34.01	34.61	70.76	62.97	AT5G40500	--	--	NP_198866.2 hypothetical protein AT5G40500 [Arabidopsis thaliana]
AT5G40850	6.34	7.99	20.94	18.64	AT5G40850	GO:0004851,uroporphyrin-III C-methyltransferase activity; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0008168,methyltransferase activity; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016740,transferase activity; GO:0019354,siroheme biosynthetic process; GO:0032259,methylation; GO:0090352,regulation of nitrate assimilation; GO:1900058,regulation of sulfate assimilation; GO:1902326,positive regulation of chlorophyll biosynthetic process; 	cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]; K02303; 	NP_198901.1 urophorphyrin methylase 1 [Arabidopsis thaliana]
AT5G40880	4.62	6.17	10.70	11.62	AT5G40880	GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005634,nucleus; GO:0046872,metal ion binding; 	--	NP_198904.1 WD-40 repeat family protein / zfwd3 protein (ZFWD3) [Arabidopsis thaliana]
AT5G41010	150.19	115.55	235.78	308.67	AT5G41010	GO:0000418,RNA polymerase IV complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0005634,nucleus; GO:0005665,RNA polymerase II, core complex; GO:0005666,RNA polymerase III complex; GO:0005736,RNA polymerase I complex; GO:0006351,DNA-templated transcription; GO:0008270,zinc ion binding; GO:0046872,metal ion binding; 	RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4; K03009; 	NP_198917.1 DNA directed RNA polymerase, 7 kDa subunit [Arabidopsis thaliana]
AT5G41080	16.95	16.16	29.42	29.88	AT5G41080	GO:0006071,glycerol metabolic process; GO:0006629,lipid metabolic process; GO:0008081,phosphoric diester hydrolase activity; GO:0008889,glycerophosphodiester phosphodiesterase activity; GO:0016787,hydrolase activity; GO:0046475,glycerophospholipid catabolic process; GO:0071456,cellular response to hypoxia; 	GDE1; glycerophosphodiester phosphodiesterase [EC:3.1.4.46]; K18696; 	NP_198924.1 PLC-like phosphodiesterases superfamily protein [Arabidopsis thaliana]
AT5G41130	20.07	17.54	6.67	12.58	AT5G41130	GO:0004144,diacylglycerol O-acyltransferase activity; GO:0005575,cellular_component; GO:0008374,O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0044249,cellular biosynthetic process; GO:1901576,organic substance biosynthetic process; 	--	NP_198929.2 Esterase/lipase/thioesterase family protein [Arabidopsis thaliana]
AT5G41190	24.35	20.36	37.87	39.81	AT5G41190	GO:0000469,cleavage involved in rRNA processing; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004521,endoribonuclease activity; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0005737,cytoplasm; GO:0006364,rRNA processing; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0016787,hydrolase activity; GO:0030490,maturation of SSU-rRNA; GO:0030688,preribosome, small subunit precursor; GO:0042254,ribosome biogenesis; GO:0042274,ribosomal small subunit biogenesis; GO:0046872,metal ion binding; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; 	NOB1; RNA-binding protein NOB1; K11883; 	NP_198935.1 RNA-binding NOB1-like protein [Arabidopsis thaliana]
AT5G41270	0.90	1.33	3.04	8.37	AT5G41270	GO:0006396,RNA processing; GO:0034470,ncRNA processing; GO:1902555,endoribonuclease complex; GO:1990904,ribonucleoprotein complex; 	--	NP_198943.3 RNase P Rpr2/Rpp21 subunit domain protein [Arabidopsis thaliana]
AT5G41460	35.70	36.95	49.71	64.18	AT5G41460	GO:0008375,acetylglucosaminyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; 	--	NP_198961.1 transferring glycosyl group transferase (DUF604) [Arabidopsis thaliana]
AT5G41670	158.91	156.90	98.65	98.08	AT5G41670	GO:0004616,phosphogluconate dehydrogenase (decarboxylating) activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006098,pentose-phosphate shunt; GO:0008114,phosphogluconate 2-dehydrogenase activity; GO:0009051,pentose-phosphate shunt, oxidative branch; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009744,response to sucrose; GO:0009749,response to glucose; GO:0009750,response to fructose; GO:0016491,oxidoreductase activity; GO:0019521,D-gluconate metabolic process; GO:0046177,D-gluconate catabolic process; GO:0050661,NADP binding; GO:0099503,secretory vesicle; 	PGD, gnd, gntZ; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]; K00033; 	NP_001318724.1 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana]
AT5G41685	135.64	170.54	219.05	258.77	AT5G41685	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0005741,mitochondrial outer membrane; GO:0005742,mitochondrial outer membrane translocase complex; GO:0015031,protein transport; GO:0016020,membrane; GO:0030150,protein import into mitochondrial matrix; 	TOM7; mitochondrial import receptor subunit TOM7; K17771; 	NP_568593.1 Mitochondrial outer membrane translocase complex, subunit Tom7 [Arabidopsis thaliana]
AT5G41790	10.63	11.03	16.87	18.77	AT5G41790	GO:0000325,plant-type vacuole; GO:0003779,actin binding; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0006970,response to osmotic stress; GO:0009536,plastid; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:0016020,membrane; GO:0042306,regulation of protein import into nucleus; GO:0071215,cellular response to abscisic acid stimulus; GO:0110165,cellular anatomical entity; 	--	NP_001330520.1 COP1-interactive protein 1 [Arabidopsis thaliana]
AT5G41860	26.71	22.24	47.21	59.94	AT5G41860	GO:0005575,cellular_component; GO:0016020,membrane; 	--	NP_199001.1 transmembrane protein [Arabidopsis thaliana]
AT5G42020	122.28	113.94	89.36	70.18	AT5G42020	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0006457,protein folding; GO:0006950,response to stress; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0016020,membrane; GO:0016592,mediator complex; GO:0016887,ATP hydrolysis activity; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0031072,heat shock protein binding; GO:0034620,cellular response to unfolded protein; GO:0034663,endoplasmic reticulum chaperone complex; GO:0034976,response to endoplasmic reticulum stress; GO:0042026,protein refolding; GO:0044183,protein folding chaperone; GO:0051082,unfolded protein binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0051787,misfolded protein binding; GO:0099503,secretory vesicle; GO:0140662,ATP-dependent protein folding chaperone; 	HSPA5, BIP; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]; K09490; 	NP_851119.1 Heat shock protein 70 (Hsp 70) family protein [Arabidopsis thaliana]
AT5G42030	41.22	46.49	78.11	64.67	AT5G42030	GO:0003674,molecular_function; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0110165,cellular anatomical entity; 	--	NP_001330354.1 ABL interactor-like protein 4 [Arabidopsis thaliana]
AT5G42060	110.01	86.76	247.95	268.99	AT5G42060	GO:0003713,transcription coactivator activity; GO:0005634,nucleus; GO:0005667,transcription regulator complex; GO:0016592,mediator complex; GO:0060261,positive regulation of transcription initiation by RNA polymerase II; 	--	NP_199021.1 DEK, chromatin associated protein [Arabidopsis thaliana]
AT5G42890	273.34	226.36	121.55	141.11	AT5G42890	GO:0005777,peroxisome; GO:0005829,cytosol; GO:0006635,fatty acid beta-oxidation; GO:0006869,lipid transport; GO:0009646,response to absence of light; GO:0009744,response to sucrose; GO:0009845,seed germination; GO:0032365,intracellular lipid transport; GO:0046487,glyoxylate metabolic process; GO:0048317,seed morphogenesis; 	--	NP_199103.1 sterol carrier protein 2 [Arabidopsis thaliana]
AT5G43030	8.85	11.55	1.99	1.79	AT5G43030	GO:0003674,molecular_function; 	--	NP_199117.1 Cysteine/Histidine-rich C1 domain family protein [Arabidopsis thaliana]
AT5G43260	79.69	85.84	140.03	134.28	AT5G43260	GO:0016020,membrane; 	--	NP_568623.1 chaperone protein dnaJ-like protein [Arabidopsis thaliana]
AT5G43330	87.01	62.12	50.33	48.20	AT5G43330	GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006099,tricarboxylic acid cycle; GO:0006107,oxaloacetate metabolic process; GO:0006108,malate metabolic process; GO:0006734,NADH metabolic process; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0016491,oxidoreductase activity; GO:0016615,malate dehydrogenase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0019752,carboxylic acid metabolic process; GO:0030060,L-malate dehydrogenase activity; 	MDH1; malate dehydrogenase [EC:1.1.1.37]; K00025; 	NP_199147.1 Lactate/malate dehydrogenase family protein [Arabidopsis thaliana]
AT5G43750	36.30	47.15	17.43	17.65	AT5G43750	GO:0006979,response to oxidative stress; GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0016020,membrane; GO:0031969,chloroplast membrane; 	--	NP_568629.1 NAD(P)H dehydrogenase 18 [Arabidopsis thaliana]
AT5G43780	77.10	72.32	43.56	45.84	AT5G43780	GO:0000103,sulfate assimilation; GO:0000166,nucleotide binding; GO:0004020,adenylylsulfate kinase activity; GO:0004781,sulfate adenylyltransferase (ATP) activity; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016740,transferase activity; GO:0016779,nucleotidyltransferase activity; GO:0070814,hydrogen sulfide biosynthetic process; 	PAPSS; 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25]; K13811; 	NP_199191.1 Pseudouridine synthase/archaeosine transglycosylase-like family protein [Arabidopsis thaliana]
AT5G44005	18.91	13.55	49.73	42.62	AT5G44005	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_974881.1 hypothetical protein AT5G44005 [Arabidopsis thaliana]
AT5G44240	12.86	11.57	6.99	8.86	AT5G44240	GO:0000166,nucleotide binding; GO:0000287,magnesium ion binding; GO:0005215,transporter activity; GO:0005524,ATP binding; GO:0005768,endosome; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0015914,phospholipid transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0016887,ATP hydrolysis activity; GO:0034204,lipid translocation; GO:0045332,phospholipid translocation; GO:0046872,metal ion binding; GO:0140326,ATPase-coupled intramembrane lipid transporter activity; 	E7.6.2.1; phospholipid-translocating ATPase [EC:7.6.2.1]; K01530; 	NP_001190471.1 aminophospholipid ATPase 2 [Arabidopsis thaliana]
AT5G44400	34.84	42.92	14.64	15.86	AT5G44400	GO:0000166,nucleotide binding; GO:0005576,extracellular region; GO:0009506,plasmodesma; GO:0016491,oxidoreductase activity; GO:0050660,flavin adenine dinucleotide binding; GO:0071949,FAD binding; 	--	NP_199253.1 FAD-binding Berberine family protein [Arabidopsis thaliana]
AT5G44530	5.50	3.51	2.04	1.81	AT5G44530	GO:0004252,serine-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; 	--	NP_568634.1 Subtilase family protein [Arabidopsis thaliana]
AT5G44860	29.83	37.59	15.72	18.41	AT5G44860	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_001330364.1 polyadenylate-binding protein 1-B-binding protein [Arabidopsis thaliana]
AT5G45100	29.39	29.97	39.27	65.68	AT5G45100	GO:0004842,ubiquitin-protein transferase activity; GO:0006952,defense response; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0043067,regulation of programmed cell death; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0046872,metal ion binding; 	--	NP_199323.2 SBP (S-ribonuclease binding protein) family protein [Arabidopsis thaliana]
AT5G45130	61.56	46.78	22.29	30.61	AT5G45130	GO:0000166,nucleotide binding; GO:0003924,GTPase activity; GO:0005515,protein binding; GO:0005525,GTP binding; GO:0005768,endosome; GO:0005774,vacuolar membrane; GO:0005783,endoplasmic reticulum; GO:0006886,intracellular protein transport; GO:0007034,vacuolar transport; GO:0010008,endosome membrane; GO:0012505,endomembrane system; GO:0015031,protein transport; GO:0016020,membrane; GO:0030139,endocytic vesicle; 	--	NP_199326.1 Ras small GTP-binding family protein [Arabidopsis thaliana]
AT5G45280	118.74	91.75	146.92	186.29	AT5G45280	GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0016787,hydrolase activity; GO:0052793,pectin acetylesterase activity; GO:0071555,cell wall organization; 	--	NP_199341.1 Pectinacetylesterase family protein [Arabidopsis thaliana]
AT5G45430	12.96	10.13	17.32	23.43	AT5G45430	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0035556,intracellular signal transduction; 	--	NP_001190473.1 Protein kinase superfamily protein [Arabidopsis thaliana]
AT5G45590	8.08	8.39	16.16	26.59	AT5G45590	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:1990904,ribonucleoprotein complex; 	--	NP_568647.1 Ribosomal protein L35 [Arabidopsis thaliana]
AT5G45600	13.06	6.70	23.83	20.43	AT5G45600	GO:0000812,Swr1 complex; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0006281,DNA repair; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006974,cellular response to DNA damage stimulus; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0016573,histone acetylation; GO:0030154,cell differentiation; GO:0035267,NuA4 histone acetyltransferase complex; GO:0042393,histone binding; GO:0043229,intracellular organelle; GO:0043981,histone H4-K5 acetylation; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0090239,regulation of histone H4 acetylation; GO:2000028,regulation of photoperiodism, flowering; 	--	NP_199373.1 YEATS family protein [Arabidopsis thaliana]
AT5G45880	34.81	33.35	12.21	17.35	AT5G45880	GO:0005615,extracellular space; 	--	NP_568650.1 Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]
AT5G46030	268.50	283.04	467.59	473.25	AT5G46030	GO:0000993,RNA polymerase II complex binding; GO:0005634,nucleus; GO:0006368,transcription elongation by RNA polymerase II promoter; GO:0008023,transcription elongation factor complex; GO:0046872,metal ion binding; 	--	VYS69444.1 unnamed protein product [Arabidopsis thaliana]
AT5G46310	0.21	0.46	3.62	5.04	AT5G46310	GO:0003674,molecular_function; GO:0008150,biological_process; 	--	NP_199443.1 WRKY family transcription factor [Arabidopsis thaliana]
AT5G46710	1.90	2.79	20.12	32.33	AT5G46710	GO:0003674,molecular_function; 	--	NP_199483.1 PLATZ transcription factor family protein [Arabidopsis thaliana]
AT5G46950	5.36	5.40	0.64	0.00	AT5G46950	GO:0004857,enzyme inhibitor activity; GO:0009793,embryo development ending in seed dormancy; GO:0030599,pectinesterase activity; GO:0043086,negative regulation of catalytic activity; GO:0046910,pectinesterase inhibitor activity; 	--	NP_568672.1 Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]
AT5G47000	89.99	64.31	188.03	172.66	AT5G47000	GO:0004601,peroxidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0006979,response to oxidative stress; GO:0009044,xylan 1,4-beta-xylosidase activity; GO:0016491,oxidoreductase activity; GO:0020037,heme binding; GO:0042744,hydrogen peroxide catabolic process; GO:0046872,metal ion binding; GO:0098869,cellular oxidant detoxification; GO:0140825,lactoperoxidase activity; 	E1.11.1.7; peroxidase [EC:1.11.1.7]; K00430; 	NP_568674.1 Peroxidase superfamily protein [Arabidopsis thaliana]
AT5G47120	348.60	316.00	190.49	200.00	AT5G47120	GO:0000038,very long-chain fatty acid metabolic process; GO:0005515,protein binding; GO:0005635,nuclear envelope; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0006983,ER overload response; GO:0009414,response to water deprivation; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0042761,very long-chain fatty acid biosynthetic process; GO:0043066,negative regulation of apoptotic process; GO:0043069,negative regulation of programmed cell death; 	--	NP_199523.1 BAX inhibitor 1 [Arabidopsis thaliana]
AT5G47190	80.13	89.19	40.59	53.44	AT5G47190	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L19, MRPL19, rplS; large subunit ribosomal protein L19; K02884; 	NP_568677.1 Ribosomal protein L19 family protein [Arabidopsis thaliana]
AT5G47210	357.26	407.02	628.12	585.85	AT5G47210	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0008150,biological_process; GO:0009536,plastid; GO:0048471,perinuclear region of cytoplasm; 	--	NP_199532.1 Hyaluronan / mRNA binding family [Arabidopsis thaliana]
AT5G47250	1.85	1.12	3.47	4.45	AT5G47250	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006952,defense response; GO:0043531,ADP binding; 	--	NP_199536.1 LRR and NB-ARC domains-containing disease resistance protein [Arabidopsis thaliana]
AT5G47600	39.64	24.71	122.71	148.99	AT5G47600	GO:0005737,cytoplasm; GO:0008150,biological_process; 	--	NP_199571.2 HSP20-like chaperones superfamily protein [Arabidopsis thaliana]
AT5G47700	361.71	457.03	975.84	1042.67	AT5G47700	GO:0002181,cytoplasmic translation; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005654,nucleoplasm; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006414,translational elongation; GO:0009536,plastid; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0030295,protein kinase activator activity; GO:0032147,activation of protein kinase activity; GO:0043021,ribonucleoprotein complex binding; GO:1990904,ribonucleoprotein complex; 	RP-LP1, RPLP1; large subunit ribosomal protein LP1; K02942; 	CAA0408273.1 unnamed protein product [Arabidopsis thaliana]
AT5G47830	8.34	9.64	1.90	1.62	AT5G47830	GO:0005515,protein binding; 	--	NP_199594.3 hypothetical protein AT5G47830 [Arabidopsis thaliana]
AT5G47920	1.25	1.37	8.38	12.31	AT5G47920	GO:0003674,molecular_function; GO:0003746,translation elongation factor activity; GO:0005575,cellular_component; GO:0006414,translational elongation; 	--	NP_199603.1 transcription elongation factor [Arabidopsis thaliana]
AT5G47930	256.34	252.46	378.47	488.25	AT5G47930	GO:0000028,ribosomal small subunit assembly; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0046872,metal ion binding; GO:1990904,ribonucleoprotein complex; 	RP-S27e, RPS27; small subunit ribosomal protein S27e; K02978; 	NP_199604.1 Zinc-binding ribosomal protein family protein [Arabidopsis thaliana]
AT5G48140	53.44	61.34	31.81	43.45	AT5G48140	GO:0004650,polygalacturonase activity; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016829,lyase activity; 	E3.2.1.67; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]; K01213; 	NP_199625.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT5G48210	126.16	132.05	54.08	47.27	AT5G48210	GO:0005576,extracellular region; GO:0009567,double fertilization forming a zygote and endosperm; GO:0031982,vesicle; GO:0080155,regulation of double fertilization forming a zygote and endosperm; GO:0110165,cellular anatomical entity; GO:2000008,regulation of protein localization to cell surface; 	--	NP_568693.1 prolamin-like protein (DUF1278) [Arabidopsis thaliana]
AT5G48230	127.71	118.40	72.09	68.37	AT5G48230	GO:0003985,acetyl-CoA C-acetyltransferase activity; GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0005886,plasma membrane; GO:0006635,fatty acid beta-oxidation; GO:0008299,isoprenoid biosynthetic process; GO:0009536,plastid; GO:0009846,pollen germination; GO:0009860,pollen tube growth; GO:0016125,sterol metabolic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0046872,metal ion binding; 	ACAT, atoB; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]; K00626; 	NP_568694.2 acetoacetyl-CoA thiolase 2 [Arabidopsis thaliana]
AT5G48485	381.38	411.68	209.68	182.51	AT5G48485	GO:0005504,fatty acid binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005783,endoplasmic reticulum; GO:0006869,lipid transport; GO:0006952,defense response; GO:0008270,zinc ion binding; GO:0008289,lipid binding; GO:0009506,plasmodesma; GO:0009627,systemic acquired resistance; GO:0009862,systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0043621,protein self-association; GO:0046872,metal ion binding; GO:0048046,apoplast; GO:0070161,anchoring junction; GO:0099503,secretory vesicle; 	--	NP_568699.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT5G48530	25.10	7.88	6.31	1.48	AT5G48530	GO:0008150,biological_process; 	--	NP_199664.2 hypothetical protein AT5G48530 [Arabidopsis thaliana]
AT5G48580	132.38	141.84	75.45	65.25	AT5G48580	GO:0000325,plant-type vacuole; GO:0000413,protein peptidyl-prolyl isomerization; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0005794,Golgi apparatus; GO:0009536,plastid; GO:0009620,response to fungus; GO:0016853,isomerase activity; GO:0034976,response to endoplasmic reticulum stress; GO:0061077,chaperone-mediated protein folding; GO:0071781,endoplasmic reticulum cisternal network; GO:0085035,haustorium; 	--	NP_199669.1 FK506- and rapamycin-binding protein 15 kD-2 [Arabidopsis thaliana]
AT5G48880	253.22	254.88	151.29	147.45	AT5G48880	GO:0003988,acetyl-CoA C-acyltransferase activity; GO:0005777,peroxisome; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0006635,fatty acid beta-oxidation; GO:0010124,phenylacetate catabolic process; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0031408,oxylipin biosynthetic process; 	ACAA1; acetyl-CoA acyltransferase 1 [EC:2.3.1.16]; K07513; 	NP_851157.1 peroxisomal 3-keto-acyl-CoA thiolase 2 [Arabidopsis thaliana]
AT5G48900	130.04	121.98	76.69	70.57	AT5G48900	GO:0016829,lyase activity; GO:0030570,pectate lyase activity; GO:0045490,pectin catabolic process; GO:0046872,metal ion binding; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_568705.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT5G48905	7.35	17.17	0.00	0.00	AT5G48905	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001032038.1 low-molecular-weight cysteine-rich 12 [Arabidopsis thaliana]
AT5G49070	3.69	5.54	0.97	1.24	AT5G49070	GO:0006633,fatty acid biosynthetic process; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; 	KCS; 3-ketoacyl-CoA synthase [EC:2.3.1.199]; K15397; 	NP_001190498.1 3-ketoacyl-CoA synthase 21 [Arabidopsis thaliana]
AT5G49300	3.90	1.23	12.86	11.36	AT5G49300	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0043565,sequence-specific DNA binding; GO:0046872,metal ion binding; 	--	NP_199741.1 GATA transcription factor 16 [Arabidopsis thaliana]
AT5G49730	10.08	10.96	4.54	4.28	AT5G49730	GO:0000293,ferric-chelate reductase activity; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0009416,response to light stimulus; GO:0009536,plastid; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; 	E1.16.1.7; ferric-chelate reductase [EC:1.16.1.7]; K00521; 	NP_199784.2 ferric reduction oxidase 6 [Arabidopsis thaliana]
AT5G49740	10.48	8.64	4.94	5.41	AT5G49740	GO:0000293,ferric-chelate reductase activity; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009767,photosynthetic electron transport chain; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0031969,chloroplast membrane; GO:0046872,metal ion binding; GO:0140618,ferric-chelate reductase (NADH) activity; 	E1.16.1.7; ferric-chelate reductase [EC:1.16.1.7]; K00521; 	NP_199785.2 ferric reduction oxidase 7 [Arabidopsis thaliana]
AT5G49910	143.16	128.22	80.26	84.47	AT5G49910	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0006457,protein folding; GO:0006950,response to stress; GO:0009408,response to heat; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0015031,protein transport; GO:0045036,protein targeting to chloroplast; GO:0048046,apoplast; GO:0051082,unfolded protein binding; GO:0140662,ATP-dependent protein folding chaperone; 	HSPA1s; heat shock 70kDa protein 1/2/6/8; K03283; 	NP_199802.1 chloroplast heat shock protein 70-2 [Arabidopsis thaliana]
AT5G49940	24.11	26.14	40.36	45.86	AT5G49940	GO:0005198,structural molecule activity; GO:0005506,iron ion binding; GO:0005739,mitochondrion; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009658,chloroplast organization; GO:0016226,iron-sulfur cluster assembly; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0097428,protein maturation by iron-sulfur cluster transfer; 	--	NP_568715.1 NIFU-like protein 2 [Arabidopsis thaliana]
AT5G50361	63.90	80.63	5.11	13.15	AT5G50361	GO:0003674,molecular_function; 	--	NP_001119408.1 hypothetical protein AT5G50361 [Arabidopsis thaliana]
AT5G50790	43.90	53.28	11.25	14.46	AT5G50790	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0008515,sucrose transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:0015770,sucrose transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0034219,carbohydrate transmembrane transport; GO:0048571,long-day photoperiodism; GO:0051119,sugar transmembrane transporter activity; 	--	NP_199892.1 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT5G50950	27.47	23.87	7.66	21.30	AT5G50950	GO:0003824,catalytic activity; GO:0004333,fumarate hydratase activity; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0006099,tricarboxylic acid cycle; GO:0006106,fumarate metabolic process; GO:0006108,malate metabolic process; GO:0009536,plastid; GO:0009631,cold acclimation; GO:0010109,regulation of photosynthesis; GO:0016829,lyase activity; GO:0042128,nitrate assimilation; GO:0045239,tricarboxylic acid cycle enzyme complex; GO:0051262,protein tetramerization; 	E4.2.1.2B, fumC, FH; fumarate hydratase, class II [EC:4.2.1.2]; K01679; 	NP_199908.1 FUMARASE 2 [Arabidopsis thaliana]
AT5G51105	8.19	11.77	0.91	1.17	AT5G51105	GO:0005576,extracellular region; GO:0009567,double fertilization forming a zygote and endosperm; GO:0031982,vesicle; GO:0080155,regulation of double fertilization forming a zygote and endosperm; GO:0110165,cellular anatomical entity; GO:2000008,regulation of protein localization to cell surface; 	--	NP_680421.1 ECA1 gametogenesis family protein (DUF1278) [Arabidopsis thaliana]
AT5G51480	16.20	14.19	6.45	10.24	AT5G51480	GO:0005507,copper ion binding; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0046872,metal ion binding; 	--	NP_199961.1 SKU5 similar 2 [Arabidopsis thaliana]
AT5G51540	3.87	2.79	6.36	8.18	AT5G51540	GO:0004177,aminopeptidase activity; GO:0004222,metalloendopeptidase activity; GO:0005739,mitochondrion; GO:0006508,proteolysis; GO:0006518,peptide metabolic process; GO:0008233,peptidase activity; GO:0008237,metallopeptidase activity; GO:0009535,chloroplast thylakoid membrane; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; 	--	NP_199967.2 Zincin-like metalloproteases family protein [Arabidopsis thaliana]
AT5G51545	42.83	32.30	7.86	15.55	AT5G51545	GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0016020,membrane; GO:0031969,chloroplast membrane; 	--	NP_001032057.1 low psii accumulation2 [Arabidopsis thaliana]
AT5G51600	13.79	15.76	9.21	9.19	AT5G51600	GO:0000226,microtubule cytoskeleton organization; GO:0000280,nuclear division; GO:0000911,cytokinesis by cell plate formation; GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005819,spindle; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0007049,cell cycle; GO:0008017,microtubule binding; GO:0009524,phragmoplast; GO:0009574,preprophase band; GO:0009624,response to nematode; GO:0046785,microtubule polymerization; GO:0051301,cell division; GO:0052096,formation of syncytium involving giant cell for nutrient acquisition; GO:0055028,cortical microtubule; 	--	NP_199973.1 Microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana]
AT5G51830	51.99	46.91	31.39	35.73	AT5G51830	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0005975,carbohydrate metabolic process; GO:0006000,fructose metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008865,fructokinase activity; GO:0016051,carbohydrate biosynthetic process; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016740,transferase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019252,starch biosynthetic process; GO:0046835,carbohydrate phosphorylation; 	E2.7.1.4, scrK; fructokinase [EC:2.7.1.4]; K00847; 	NP_001318782.1 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]
AT5G51840	14.92	12.91	6.86	3.53	AT5G51840	GO:0005575,cellular_component; 	--	NP_568766.1 junctophilin-like protein [Arabidopsis thaliana]
AT5G51950	140.36	124.59	87.95	78.34	AT5G51950	GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0050660,flavin adenine dinucleotide binding; 	--	NP_200008.1 Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]
AT5G52160	189.20	198.22	54.50	65.59	AT5G52160	GO:0003674,molecular_function; GO:0006508,proteolysis; GO:0008150,biological_process; GO:0008233,peptidase activity; 	--	NP_200029.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT5G52360	33.39	48.52	17.12	9.43	AT5G52360	GO:0003779,actin binding; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005884,actin filament; GO:0007015,actin filament organization; GO:0009860,pollen tube growth; GO:0015629,actin cytoskeleton; GO:0030042,actin filament depolymerization; GO:0048046,apoplast; GO:0051015,actin filament binding; 	CFL; cofilin; K05765; 	NP_568769.1 actin depolymerizing factor 10 [Arabidopsis thaliana]
AT5G52390	220.34	221.16	116.50	151.98	AT5G52390	--	--	NP_200052.1 PAR1 protein [Arabidopsis thaliana]
AT5G52540	40.06	48.12	32.14	23.16	AT5G52540	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0009941,chloroplast envelope; GO:0016020,membrane; 	--	NP_200067.1 keratin-associated protein, putative (DUF819) [Arabidopsis thaliana]
AT5G52650	348.83	310.44	545.54	506.11	AT5G52650	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0009505,plant-type cell wall; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S10e, RPS10; small subunit ribosomal protein S10e; K02947; 	NP_200077.1 RNA binding Plectin/S10 domain-containing protein [Arabidopsis thaliana]
AT5G52820	14.83	20.10	33.93	22.58	AT5G52820	GO:0000027,ribosomal large subunit assembly; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0009553,embryo sac development; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; 	--	NP_200094.1 WD-40 repeat family protein / notchless protein [Arabidopsis thaliana]
AT5G52970	38.35	33.72	15.06	21.30	AT5G52970	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009579,thylakoid; GO:0031977,thylakoid lumen; 	--	NP_001318791.1 thylakoid lumen 15.0 kDa protein [Arabidopsis thaliana]
AT5G53190	19.82	21.46	8.95	9.31	AT5G53190	GO:0005515,protein binding; GO:0005886,plasma membrane; GO:0008643,carbohydrate transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0034219,carbohydrate transmembrane transport; GO:0051119,sugar transmembrane transporter activity; 	--	NP_200131.2 Nodulin MtN3 family protein [Arabidopsis thaliana]
AT5G53490	60.14	56.70	27.09	35.36	AT5G53490	GO:0005515,protein binding; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009543,chloroplast thylakoid lumen; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031977,thylakoid lumen; 	--	NP_001330392.1 Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]
AT5G53550	7.74	7.11	3.83	3.42	AT5G53550	GO:0003006,developmental process involved in reproduction; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0009624,response to nematode; GO:0010039,response to iron ion; GO:0016020,membrane; GO:0033214,siderophore-dependent iron import into cell; GO:0035672,oligopeptide transmembrane transport; GO:0035673,oligopeptide transmembrane transporter activity; GO:0048316,seed development; GO:0051980,iron-nicotianamine transmembrane transporter activity; GO:0055072,iron ion homeostasis; 	--	NP_001190532.1 YELLOW STRIPE like 3 [Arabidopsis thaliana]
AT5G53850	28.53	25.46	43.12	44.19	AT5G53850	GO:0000287,magnesium ion binding; GO:0003824,catalytic activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008152,metabolic process; GO:0008270,zinc ion binding; GO:0008652,cellular amino acid biosynthetic process; GO:0009086,methionine biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016787,hydrolase activity; GO:0016829,lyase activity; GO:0019284,L-methionine salvage from S-adenosylmethionine; GO:0019509,L-methionine salvage from methylthioadenosine; GO:0043715,2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity; GO:0043716,2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity; GO:0043874,acireductone synthase activity; GO:0046570,methylthioribulose 1-phosphate dehydratase activity; GO:0046872,metal ion binding; 	DEP1; methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 [EC:4.2.1.109 3.1.3.77]; K16054; 	NP_001330483.1 haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]
AT5G54160	211.55	211.99	141.84	135.07	AT5G54160	GO:0005634,nucleus; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0008168,methyltransferase activity; GO:0008171,O-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0009809,lignin biosynthetic process; GO:0016740,transferase activity; GO:0017096,acetylserotonin O-methyltransferase activity; GO:0019438,aromatic compound biosynthetic process; GO:0030187,melatonin biosynthetic process; GO:0030744,luteolin O-methyltransferase activity; GO:0030755,quercetin 3-O-methyltransferase activity; GO:0032259,methylation; GO:0033799,myricetin 3'-O-methyltransferase activity; GO:0046983,protein dimerization activity; GO:0047763,caffeate O-methyltransferase activity; GO:0051555,flavonol biosynthetic process; GO:0102822,quercetin 3'-O-methyltransferase activity; 	E2.1.1.68, COMT; caffeic acid 3-O-methyltransferase [EC:2.1.1.68]; K13066; 	NP_200227.1 O-methyltransferase 1 [Arabidopsis thaliana]
AT5G54190	32.12	25.79	12.47	9.26	AT5G54190	GO:0003729,mRNA binding; GO:0005515,protein binding; GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009640,photomorphogenesis; GO:0009647,skotomorphogenesis; GO:0009723,response to ethylene; GO:0009941,chloroplast envelope; GO:0015979,photosynthesis; GO:0015995,chlorophyll biosynthetic process; GO:0016491,oxidoreductase activity; GO:0016630,protochlorophyllide reductase activity; 	por; protochlorophyllide reductase [EC:1.3.1.33]; K00218; 	NP_200230.1 protochlorophyllide oxidoreductase A [Arabidopsis thaliana]
AT5G54225	0.00	0.00	6.78	13.94	AT5G54225	GO:0003674,molecular_function; GO:0005576,extracellular region; GO:0006952,defense response; GO:0008150,biological_process; GO:0031640,killing of cells of another organism; GO:0050832,defense response to fungus; 	--	NP_001032074.1 low-molecular-weight cysteine-rich 83 [Arabidopsis thaliana]
AT5G54250	23.60	20.87	33.99	44.32	AT5G54250	GO:0000166,nucleotide binding; GO:0005216,ion channel activity; GO:0005516,calmodulin binding; GO:0005886,plasma membrane; GO:0006811,ion transport; GO:0006952,defense response; GO:0008324,cation transmembrane transporter activity; GO:0009626,plant-type hypersensitive response; GO:0016020,membrane; GO:0030552,cAMP binding; GO:0030553,cGMP binding; GO:0034220,ion transmembrane transport; GO:0055085,transmembrane transport; GO:0098655,cation transmembrane transport; 	CNGC; cyclic nucleotide gated channel, plant; K05391; 	NP_001332114.1 cyclic nucleotide-gated cation channel 4 [Arabidopsis thaliana]
AT5G54270	3656.74	3546.03	1917.70	1920.08	AT5G54270	GO:0005515,protein binding; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009517,PSII associated light-harvesting complex II; GO:0009522,photosystem I; GO:0009523,photosystem II; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0009536,plastid; GO:0009579,thylakoid; GO:0009635,response to herbicide; GO:0009644,response to high light intensity; GO:0009737,response to abscisic acid; GO:0009765,photosynthesis, light harvesting; GO:0009768,photosynthesis, light harvesting in photosystem I; GO:0009769,photosynthesis, light harvesting in photosystem II; GO:0010119,regulation of stomatal movement; GO:0015979,photosynthesis; GO:0016020,membrane; GO:0016168,chlorophyll binding; GO:0019904,protein domain specific binding; GO:0042651,thylakoid membrane; GO:0046872,metal ion binding; 	LHCB3; light-harvesting complex II chlorophyll a/b binding protein 3; K08914; 	NP_200238.1 light-harvesting chlorophyll B-binding protein 3 [Arabidopsis thaliana]
AT5G54300	5.49	6.56	21.33	7.96	AT5G54300	GO:0003674,molecular_function; GO:0016020,membrane; 	--	NP_200241.1 cotton fiber-like protein (DUF761) [Arabidopsis thaliana]
AT5G54500	101.80	128.43	66.72	54.09	AT5G54500	GO:0000166,nucleotide binding; GO:0000325,plant-type vacuole; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0005773,vacuole; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006979,response to oxidative stress; GO:0008753,NADPH dehydrogenase (quinone) activity; GO:0009536,plastid; GO:0009733,response to auxin; GO:0010181,FMN binding; GO:0016020,membrane; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0071365,cellular response to auxin stimulus; 	wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]; K03809; 	NP_200261.1 flavodoxin-like quinone reductase 1 [Arabidopsis thaliana]
AT5G54600	147.95	157.44	113.61	90.11	AT5G54600	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005739,mitochondrion; GO:0005840,ribosome; GO:0006412,translation; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009941,chloroplast envelope; GO:0019843,rRNA binding; GO:0032544,plastid translation; GO:1990904,ribonucleoprotein complex; 	RP-L24, MRPL24, rplX; large subunit ribosomal protein L24; K02895; 	NP_851190.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT5G54770	2885.56	3032.43	1864.00	1755.08	AT5G54770	GO:0005506,iron ion binding; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006974,cellular response to DNA damage stimulus; GO:0008270,zinc ion binding; GO:0009228,thiamine biosynthetic process; GO:0009409,response to cold; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009579,thylakoid; GO:0009941,chloroplast envelope; GO:0010319,stromule; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016763,pentosyltransferase activity; GO:0018131,oxazole or thiazole biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019904,protein domain specific binding; GO:0042803,protein homodimerization activity; GO:0044272,sulfur compound biosynthetic process; GO:0046872,metal ion binding; GO:0052837,thiazole biosynthetic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901566,organonitrogen compound biosynthetic process; 	THI4, THI1; cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]; K03146; 	NP_200288.1 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) [Arabidopsis thaliana]
AT5G54870	110.53	106.45	68.49	53.59	AT5G54870	GO:0000325,plant-type vacuole; 	--	NP_200298.1 inositol-1,4,5-trisphosphate 5-phosphatase [Arabidopsis thaliana]
AT5G54910	11.82	11.14	19.00	18.37	AT5G54910	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; 	--	NP_200302.1 DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
AT5G55000	20.47	18.61	39.68	37.44	AT5G55000	GO:0005515,protein binding; GO:0016567,protein ubiquitination; GO:0051260,protein homooligomerization; 	--	NP_851193.1 potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein [Arabidopsis thaliana]
AT5G55180	105.58	103.89	64.21	56.48	AT5G55180	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0005886,plasma membrane; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; 	--	NP_568822.1 O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
AT5G55300	15.68	13.95	26.17	21.97	AT5G55300	GO:0003677,DNA binding; GO:0003916,DNA topoisomerase activity; GO:0003917,DNA topoisomerase type I (single strand cut, ATP-independent) activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0006260,DNA replication; GO:0006265,DNA topological change; GO:0006338,chromatin remodeling; GO:0007059,chromosome segregation; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0009933,meristem structural organization; GO:0009965,leaf morphogenesis; GO:0010016,shoot system morphogenesis; GO:0010075,regulation of meristem growth; GO:0016853,isomerase activity; GO:0019827,stem cell population maintenance; GO:0048439,flower morphogenesis; GO:1905393,plant organ formation; 	--	NP_200341.1 DNA topoisomerase I alpha [Arabidopsis thaliana]
AT5G55320	3.22	4.04	0.66	0.00	AT5G55320	GO:0006629,lipid metabolic process; GO:0008374,O-acyltransferase activity; GO:0016020,membrane; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0047196,long-chain-alcohol O-fatty-acyltransferase activity; GO:0102966,arachidoyl-CoA:1-dodecanol O-acyltransferase activity; 	--	NP_200343.1 MBOAT (membrane bound O-acyl transferase) family protein [Arabidopsis thaliana]
AT5G55610	31.09	32.79	64.60	57.17	AT5G55610	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0009536,plastid; 	--	NP_200372.1 isopentenyl-diphosphate delta-isomerase [Arabidopsis thaliana]
AT5G55920	66.55	63.84	127.14	112.21	AT5G55920	GO:0000470,maturation of LSU-rRNA; GO:0001510,RNA methylation; GO:0003723,RNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0009383,rRNA (cytosine-C5-)-methyltransferase activity; GO:0009965,leaf morphogenesis; GO:0010015,root morphogenesis; GO:0016740,transferase activity; GO:0032259,methylation; GO:0042127,regulation of cell population proliferation; GO:0042254,ribosome biogenesis; GO:0051301,cell division; GO:0070475,rRNA base methylation; GO:0090069,regulation of ribosome biogenesis; 	--	NP_850927.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT5G55930	26.76	24.41	13.69	14.73	AT5G55930	GO:0005886,plasma membrane; GO:0015031,protein transport; GO:0015833,peptide transport; GO:0016020,membrane; GO:0035672,oligopeptide transmembrane transport; GO:0035673,oligopeptide transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_200404.1 oligopeptide transporter 1 [Arabidopsis thaliana]
AT5G56120	28.34	28.25	11.39	18.30	AT5G56120	GO:0003674,molecular_function; GO:0003746,translation elongation factor activity; GO:0006414,translational elongation; GO:0008150,biological_process; GO:0016020,membrane; 	--	NP_200423.2 RNA polymerase II elongation factor [Arabidopsis thaliana]
AT5G56710	546.68	564.37	1140.76	1121.89	AT5G56710	GO:0002181,cytoplasmic translation; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L31e, RPL31; large subunit ribosomal protein L31e; K02910; 	NP_200482.1 Ribosomal protein L31e family protein [Arabidopsis thaliana]
AT5G56810	0.17	0.00	1.75	1.92	AT5G56810	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0008150,biological_process; 	--	NP_200492.1 F-box/RNI-like/FBD-like domains-containing protein [Arabidopsis thaliana]
AT5G56910	56.23	44.63	28.50	23.78	AT5G56910	--	--	NP_200501.1 Proteinase inhibitor I25, cystatin, conserved region [Arabidopsis thaliana]
AT5G57290	396.94	298.65	532.67	587.98	AT5G57290	GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006414,translational elongation; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:1990904,ribonucleoprotein complex; 	RP-LP1, RPLP1; large subunit ribosomal protein LP1; K02942; 	NP_200539.1 60S acidic ribosomal protein family [Arabidopsis thaliana]
AT5G57400	0.64	1.05	6.44	9.46	AT5G57400	GO:0016020,membrane; 	--	NP_200550.5 transmembrane protein [Arabidopsis thaliana]
AT5G57780	1.39	2.55	12.05	13.77	AT5G57780	GO:0006355,regulation of DNA-templated transcription; 	--	NP_200586.1 transcription factor [Arabidopsis thaliana]
AT5G57890	17.96	8.46	46.80	44.86	AT5G57890	GO:0000162,tryptophan biosynthetic process; GO:0004049,anthranilate synthase activity; GO:0006541,glutamine metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0016829,lyase activity; GO:0071704,organic substance metabolic process; 	trpG; anthranilate synthase component II [EC:4.1.3.27]; K01658; 	NP_200597.1 Glutamine amidotransferase type 1 family protein [Arabidopsis thaliana]
AT5G57990	31.69	33.93	54.93	57.17	AT5G57990	GO:0004197,cysteine-type endopeptidase activity; GO:0004843,cysteine-type deubiquitinase activity; GO:0005634,nucleus; GO:0005829,cytosol; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016579,protein deubiquitination; GO:0016787,hydrolase activity; 	--	NP_568873.1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
AT5G58005	72.09	77.77	148.05	154.49	AT5G58005	GO:0003674,molecular_function; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0008150,biological_process; GO:0045277,respiratory chain complex IV; 	COA6; cytochrome c oxidase assembly factor 6; K18179; 	NP_001032092.1 Cytochrome c oxidase, subunit Vib family protein [Arabidopsis thaliana]
AT5G58310	32.54	22.76	15.34	6.03	AT5G58310	GO:0005575,cellular_component; GO:0009694,jasmonic acid metabolic process; GO:0009696,salicylic acid metabolic process; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0051723,protein methylesterase activity; GO:0080030,methyl indole-3-acetate esterase activity; GO:0080031,methyl salicylate esterase activity; GO:0080032,methyl jasmonate esterase activity; 	--	NP_200639.1 methyl esterase 18 [Arabidopsis thaliana]
AT5G58610	2.07	2.34	6.05	8.02	AT5G58610	GO:0003674,molecular_function; GO:0008150,biological_process; GO:0046872,metal ion binding; 	--	NP_001330113.1 PHD finger transcription factor [Arabidopsis thaliana]
AT5G58840	3.34	3.10	0.30	0.39	AT5G58840	GO:0004252,serine-type endopeptidase activity; GO:0005576,extracellular region; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016020,membrane; GO:0016787,hydrolase activity; 	--	NP_568890.2 Subtilase family protein [Arabidopsis thaliana]
AT5G58970	14.01	19.94	5.62	10.21	AT5G58970	GO:0003333,amino acid transmembrane transport; GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005794,Golgi apparatus; GO:0005886,plasma membrane; GO:0006839,mitochondrial transport; GO:0015171,amino acid transmembrane transporter activity; GO:0016020,membrane; GO:0017077,oxidative phosphorylation uncoupler activity; GO:0022857,transmembrane transporter activity; GO:0031966,mitochondrial membrane; GO:1902600,proton transmembrane transport; GO:1990542,mitochondrial transmembrane transport; 	--	NP_568894.1 uncoupling protein 2 [Arabidopsis thaliana]
AT5G59370	40.91	29.97	14.58	27.16	AT5G59370	GO:0000166,nucleotide binding; GO:0005200,structural constituent of cytoskeleton; GO:0005524,ATP binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005856,cytoskeleton; GO:0007010,cytoskeleton organization; GO:0009536,plastid; GO:0016787,hydrolase activity; 	--	NP_001078769.1 actin 4 [Arabidopsis thaliana]
AT5G59690	473.09	387.08	267.15	289.21	AT5G59690	GO:0000325,plant-type vacuole; GO:0000786,nucleosome; GO:0003677,DNA binding; GO:0005515,protein binding; GO:0005576,extracellular region; GO:0005634,nucleus; GO:0005694,chromosome; GO:0005730,nucleolus; GO:0005777,peroxisome; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009414,response to water deprivation; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009579,thylakoid; GO:0030527,structural constituent of chromatin; GO:0046982,protein heterodimerization activity; 	H4; histone H4; K11254; 	GAV57897.1 Histone domain-containing protein, partial [Cephalotus follicularis]
AT5G59850	1529.14	1490.65	3326.39	3163.63	AT5G59850	GO:0000325,plant-type vacuole; GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S15Ae, RPS15A; small subunit ribosomal protein S15Ae; K02957; 	NP_001318947.1 ribosomal protein S15A [Arabidopsis thaliana]
AT5G59880	476.39	535.86	359.14	308.83	AT5G59880	GO:0003779,actin binding; GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005829,cytosol; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0007015,actin filament organization; GO:0009506,plasmodesma; GO:0009507,chloroplast; GO:0009536,plastid; GO:0015629,actin cytoskeleton; GO:0030042,actin filament depolymerization; GO:0051015,actin filament binding; 	CFL; cofilin; K05765; 	NP_851227.1 actin depolymerizing factor 3 [Arabidopsis thaliana]
AT5G60250	4.05	5.76	21.60	20.06	AT5G60250	GO:0000151,ubiquitin ligase complex; GO:0000209,protein polyubiquitination; GO:0003676,nucleic acid binding; GO:0004523,RNA-DNA hybrid ribonuclease activity; GO:0004842,ubiquitin-protein transferase activity; GO:0005737,cytoplasm; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0031624,ubiquitin conjugating enzyme binding; GO:0032436,positive regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; 	--	NP_200833.1 zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
AT5G60510	107.85	94.32	40.79	61.97	AT5G60510	GO:0002094,polyprenyltransferase activity; GO:0005783,endoplasmic reticulum; GO:0006486,protein glycosylation; GO:0016094,polyprenol biosynthetic process; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; 	DHDDS, RER2, SRT1; ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87]; K11778; 	NP_200859.1 Undecaprenyl pyrophosphate synthetase family protein [Arabidopsis thaliana]
AT5G60600	119.53	109.98	77.83	74.90	AT5G60600	GO:0005506,iron ion binding; GO:0008299,isoprenoid biosynthetic process; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0009617,response to bacterium; GO:0009862,systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0009941,chloroplast envelope; GO:0016114,terpenoid biosynthetic process; GO:0016491,oxidoreductase activity; GO:0019288,isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0044237,cellular metabolic process; GO:0046429,4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; GO:0046872,metal ion binding; GO:0051536,iron-sulfur cluster binding; GO:0051539,4 iron, 4 sulfur cluster binding; 	gcpE, ispG; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]; K03526; 	NP_001119467.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis thaliana]
AT5G60660	33.70	37.63	13.87	26.25	AT5G60660	GO:0005886,plasma membrane; GO:0006833,water transport; GO:0009506,plasmodesma; GO:0015250,water channel activity; GO:0015267,channel activity; GO:0016020,membrane; GO:0048767,root hair elongation; GO:0055085,transmembrane transport; GO:0080170,hydrogen peroxide transmembrane transport; 	--	NP_200874.1 plasma membrane intrinsic protein 2;4 [Arabidopsis thaliana]
AT5G60670	109.43	107.94	210.82	188.76	AT5G60670	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0015934,large ribosomal subunit; GO:0019843,rRNA binding; GO:0022625,cytosolic large ribosomal subunit; GO:0070180,large ribosomal subunit rRNA binding; GO:1990904,ribonucleoprotein complex; 	RP-L12e, RPL12; large subunit ribosomal protein L12e; K02870; 	NP_200875.1 Ribosomal protein L11 family protein [Arabidopsis thaliana]
AT5G60730	7.77	4.16	12.34	16.97	AT5G60730	GO:0000166,nucleotide binding; GO:0005524,ATP binding; GO:0005739,mitochondrion; GO:0005759,mitochondrial matrix; GO:0006620,post-translational protein targeting to endoplasmic reticulum membrane; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0043529,GET complex; 	--	NP_200881.2 Anion-transporting ATPase [Arabidopsis thaliana]
AT5G61090	2.37	1.70	0.17	0.44	AT5G61090	GO:0003676,nucleic acid binding; GO:0004523,RNA-DNA hybrid ribonuclease activity; GO:0016740,transferase activity; GO:0090502,RNA phosphodiester bond hydrolysis, endonucleolytic; 	--	NP_001330380.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Arabidopsis thaliana]
AT5G61240	150.91	145.16	98.26	87.19	AT5G61240	GO:0000138,Golgi trans cisterna; GO:0003674,molecular_function; GO:0005515,protein binding; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0099503,secretory vesicle; 	--	NP_001190586.1 Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]
AT5G61310	62.48	67.35	162.67	155.73	AT5G61310	GO:0005739,mitochondrion; GO:0005743,mitochondrial inner membrane; GO:0005746,mitochondrial respirasome; GO:0016020,membrane; 	--	NP_001032118.1 Cytochrome c oxidase subunit Vc family protein [Arabidopsis thaliana]
AT5G61330	15.17	20.50	27.62	36.47	AT5G61330	GO:0005634,nucleus; GO:0005730,nucleolus; GO:0008150,biological_process; 	--	NP_001331140.1 rRNA processing protein-like protein [Arabidopsis thaliana]
AT5G61380	61.70	48.81	117.39	106.29	AT5G61380	GO:0000160,phosphorelay signal transduction system; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0007623,circadian rhythm; GO:0009736,cytokinin-activated signaling pathway; GO:0009908,flower development; GO:0010031,circumnutation; GO:0010468,regulation of gene expression; GO:0010629,negative regulation of gene expression; GO:0048511,rhythmic process; 	TOC1, APRR1; pseudo-response regulator 1; K12127; 	NP_200946.1 CCT motif -containing response regulator protein [Arabidopsis thaliana]
AT5G61520	10.16	7.67	14.85	20.50	AT5G61520	GO:0008643,carbohydrate transport; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0015293,symporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_200960.2 Major facilitator superfamily protein [Arabidopsis thaliana]
AT5G61550	10.69	13.04	4.83	5.87	AT5G61550	GO:0000166,nucleotide binding; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0005524,ATP binding; GO:0006468,protein phosphorylation; GO:0016301,kinase activity; GO:0016310,phosphorylation; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0106310,protein serine kinase activity; 	--	NP_001332142.1 U-box domain-containing protein kinase family protein [Arabidopsis thaliana]
AT5G61590	38.66	31.02	81.30	62.28	AT5G61590	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009414,response to water deprivation; GO:0009873,ethylene-activated signaling pathway; GO:0019760,glucosinolate metabolic process; GO:0045893,positive regulation of DNA-templated transcription; GO:1904277,negative regulation of wax biosynthetic process; 	--	NP_200967.1 Integrase-type DNA-binding superfamily protein [Arabidopsis thaliana]
AT5G61660	81.57	88.38	34.16	42.85	AT5G61660	GO:0003674,molecular_function; GO:0005575,cellular_component; GO:0008150,biological_process; 	--	NP_568938.1 glycine-rich protein [Arabidopsis thaliana]
AT5G61780	103.52	117.17	74.61	73.48	AT5G61780	GO:0000932,P-body; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0004518,nuclease activity; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005829,cytosol; GO:0006397,mRNA processing; GO:0006402,mRNA catabolic process; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0009651,response to salt stress; GO:0009686,gibberellin biosynthetic process; GO:0009845,seed germination; GO:0010372,positive regulation of gibberellin biosynthetic process; GO:0010494,cytoplasmic stress granule; GO:0016442,RISC complex; GO:0016787,hydrolase activity; GO:0031047,gene silencing by RNA; GO:0034605,cellular response to heat; GO:0046686,response to cadmium ion; GO:0048471,perinuclear region of cytoplasm; GO:0090305,nucleic acid phosphodiester bond hydrolysis; 	--	NP_200986.1 TUDOR-SN protein 2 [Arabidopsis thaliana]
AT5G62065	16.14	18.44	2.79	2.39	AT5G62065	GO:0003674,molecular_function; GO:0006869,lipid transport; GO:0008289,lipid binding; 	--	NP_001078780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT5G62080	1094.17	1138.21	345.65	399.17	AT5G62080	GO:0005802,trans-Golgi network; GO:0043668,exine; 	--	NP_568949.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Arabidopsis thaliana]
AT5G62190	66.48	75.87	116.00	112.97	AT5G62190	GO:0000166,nucleotide binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003724,RNA helicase activity; GO:0004386,helicase activity; GO:0005524,ATP binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0016070,RNA metabolic process; GO:0016787,hydrolase activity; GO:0016887,ATP hydrolysis activity; GO:0017151,DEAD/H-box RNA helicase binding; 	--	NP_201025.1 DEAD box RNA helicase (PRH75) [Arabidopsis thaliana]
AT5G62290	184.04	189.96	323.27	310.58	AT5G62290	GO:0000387,spliceosomal snRNP assembly; GO:0003674,molecular_function; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0006821,chloride transport; GO:0006884,cell volume homeostasis; GO:0034709,methylosome; GO:0034715,pICln-Sm protein complex; GO:0045292,mRNA cis splicing, via spliceosome; 	CLNS1A; chloride channel, nucleotide-sensitive, 1A; K05019; 	NP_201035.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein [Arabidopsis thaliana]
AT5G62540	57.41	35.24	97.58	104.38	AT5G62540	GO:0000166,nucleotide binding; GO:0000209,protein polyubiquitination; GO:0004842,ubiquitin-protein transferase activity; GO:0005524,ATP binding; GO:0006281,DNA repair; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0016574,histone ubiquitination; GO:0016740,transferase activity; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0061631,ubiquitin conjugating enzyme activity; 	UBE2A, UBC2, RAD6A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]; K10573; 	NP_568956.1 ubiquitin-conjugating enzyme 3 [Arabidopsis thaliana]
AT5G62770	7.26	7.02	13.80	19.89	AT5G62770	GO:0003674,molecular_function; GO:0005515,protein binding; GO:0016301,kinase activity; GO:0016310,phosphorylation; 	--	NP_201083.1 membrane-associated kinase regulator, putative (DUF1645) [Arabidopsis thaliana]
AT5G63150	7.87	10.50	27.51	42.65	AT5G63150	GO:0005575,cellular_component; GO:0006397,mRNA processing; 	--	NP_568966.1 hypothetical protein AT5G63150 [Arabidopsis thaliana]
AT5G63180	21.64	19.63	31.69	32.73	AT5G63180	GO:0009536,plastid; GO:0016829,lyase activity; GO:0030570,pectate lyase activity; GO:0045490,pectin catabolic process; GO:0046872,metal ion binding; 	pel; pectate lyase [EC:4.2.2.2]; K01728; 	NP_568967.1 Pectin lyase-like superfamily protein [Arabidopsis thaliana]
AT5G63420	17.47	18.92	24.67	35.68	AT5G63420	GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004527,exonuclease activity; GO:0006364,rRNA processing; GO:0008409,5'-3' exonuclease activity; GO:0009416,response to light stimulus; GO:0009507,chloroplast; GO:0009536,plastid; GO:0009658,chloroplast organization; GO:0009734,auxin-activated signaling pathway; GO:0009793,embryo development ending in seed dormancy; GO:0009942,longitudinal axis specification; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; GO:0060918,auxin transport; GO:0090305,nucleic acid phosphodiester bond hydrolysis; 	--	NP_201147.2 RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana]
AT5G63510	77.26	79.40	49.01	51.64	AT5G63510	GO:0004089,carbonate dehydratase activity; GO:0005515,protein binding; GO:0005739,mitochondrion; GO:0005747,mitochondrial respiratory chain complex I; GO:0009536,plastid; GO:0009651,response to salt stress; GO:0009737,response to abscisic acid; GO:0009853,photorespiration; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0016020,membrane; GO:0031966,mitochondrial membrane; GO:0045271,respiratory chain complex I; GO:0046872,metal ion binding; 	GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]; K01726; 	NP_001190608.1 gamma carbonic anhydrase like 1 [Arabidopsis thaliana]
AT5G63520	11.64	12.31	44.99	34.92	AT5G63520	GO:0000209,protein polyubiquitination; GO:0005515,protein binding; GO:0032436,positive regulation of proteasomal ubiquitin-dependent protein catabolic process; 	--	NP_201157.4 F-box/LRR protein [Arabidopsis thaliana]
AT5G63810	64.10	72.53	49.27	43.07	AT5G63810	GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004565,beta-galactosidase activity; GO:0005576,extracellular region; GO:0005773,vacuole; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009536,plastid; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0048046,apoplast; 	--	NP_201186.1 beta-galactosidase 10 [Arabidopsis thaliana]
AT5G63850	118.73	123.15	53.23	48.61	AT5G63850	GO:0003333,amino acid transmembrane transport; GO:0005886,plasma membrane; GO:0006865,amino acid transport; GO:0015171,amino acid transmembrane transporter activity; GO:0015172,acidic amino acid transmembrane transporter activity; GO:0015175,neutral amino acid transmembrane transporter activity; GO:0015293,symporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0015800,acidic amino acid transport; GO:0015804,neutral amino acid transport; GO:0016020,membrane; 	--	NP_201190.1 amino acid permease 4 [Arabidopsis thaliana]
AT5G64030	85.62	79.53	57.60	52.62	AT5G64030	GO:0000139,Golgi membrane; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0005802,trans-Golgi network; GO:0008168,methyltransferase activity; GO:0009536,plastid; GO:0016020,membrane; GO:0016740,transferase activity; GO:0032259,methylation; 	--	NP_201208.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]
AT5G64140	194.64	240.34	392.82	338.15	AT5G64140	GO:0000028,ribosomal small subunit assembly; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0005737,cytoplasm; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0030490,maturation of SSU-rRNA; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-S28e, RPS28; small subunit ribosomal protein S28e; K02979; 	NP_201219.1 ribosomal protein S28 [Arabidopsis thaliana]
AT5G64240	34.57	27.72	19.04	19.21	AT5G64240	GO:0004197,cysteine-type endopeptidase activity; GO:0006508,proteolysis; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; 	--	NP_851262.1 metacaspase 3 [Arabidopsis thaliana]
AT5G64310	373.33	388.86	149.98	181.85	AT5G64310	GO:0005886,plasma membrane; GO:0016020,membrane; 	--	NP_201236.1 arabinogalactan protein 1 [Arabidopsis thaliana]
AT5G64340	3.58	2.21	9.67	8.70	AT5G64340	GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009826,unidimensional cell growth; GO:0046983,protein dimerization activity; 	--	NP_201239.1 transcription factor SAC51 [Arabidopsis thaliana]
AT5G64370	36.47	37.36	25.03	23.33	AT5G64370	GO:0003837,beta-ureidopropionase activity; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0006212,uracil catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0016787,hydrolase activity; GO:0016810,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; GO:0016811,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; GO:0019483,beta-alanine biosynthetic process; GO:0033396,beta-alanine biosynthetic process via 3-ureidopropionate; GO:0043562,cellular response to nitrogen levels; 	UPB1, pydC; beta-ureidopropionase [EC:3.5.1.6]; K01431; 	NP_201242.2 beta-ureidopropionase [Arabidopsis thaliana]
AT5G64410	21.29	17.99	10.79	8.72	AT5G64410	GO:0005886,plasma membrane; GO:0015031,protein transport; GO:0015833,peptide transport; GO:0016020,membrane; GO:0035672,oligopeptide transmembrane transport; GO:0035673,oligopeptide transmembrane transporter activity; GO:0055085,transmembrane transport; 	--	NP_201246.1 oligopeptide transporter 4 [Arabidopsis thaliana]
AT5G64420	28.80	29.62	49.23	43.37	AT5G64420	GO:0003677,DNA binding; GO:0005634,nucleus; GO:0005730,nucleolus; GO:0006355,regulation of DNA-templated transcription; GO:0008134,transcription factor binding; 	--	NP_201247.1 DNA polymerase V family [Arabidopsis thaliana]
AT5G64630	97.66	104.63	38.38	30.80	AT5G64630	GO:0000724,double-strand break repair via homologous recombination; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006281,DNA repair; GO:0006310,DNA recombination; GO:0006325,chromatin organization; GO:0006334,nucleosome assembly; GO:0006335,DNA replication-dependent chromatin assembly; GO:0006974,cellular response to DNA damage stimulus; GO:0009555,pollen development; GO:0009933,meristem structural organization; GO:0010026,trichome differentiation; GO:0031507,heterochromatin formation; GO:0033186,CAF-1 complex; GO:0048366,leaf development; 	--	NP_568990.1 Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
AT5G64816	93.60	79.94	123.64	169.99	AT5G64816	GO:0008150,biological_process; GO:0009536,plastid; 	--	NP_001331704.1 thionin-like protein [Arabidopsis thaliana]
AT5G64920	8.86	9.74	13.43	24.17	AT5G64920	GO:0005515,protein binding; GO:0005737,cytoplasm; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0016740,transferase activity; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; 	--	NP_201297.1 COP1-interacting protein 8 [Arabidopsis thaliana]
AT5G65205	40.69	42.32	17.70	29.83	AT5G65205	GO:0005783,endoplasmic reticulum; GO:0008150,biological_process; GO:0016491,oxidoreductase activity; 	--	NP_569008.1 NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]
AT5G65840	54.33	44.16	27.71	24.10	AT5G65840	GO:0009507,chloroplast; GO:0009536,plastid; GO:0009570,chloroplast stroma; GO:0016209,antioxidant activity; GO:0098869,cellular oxidant detoxification; 	--	NP_201385.2 Thioredoxin superfamily protein [Arabidopsis thaliana]
AT5G65950	12.33	12.54	22.19	19.18	AT5G65950	GO:0003674,molecular_function; GO:0005829,cytosol; GO:0006895,Golgi to endosome transport; GO:0009536,plastid; 	--	NP_201396.4 trafficking protein particle complex subunit-like protein [Arabidopsis thaliana]
AT5G65960	21.80	26.14	35.97	44.41	AT5G65960	GO:0003924,GTPase activity; GO:0005525,GTP binding; 	--	NP_569023.1 GTP binding protein [Arabidopsis thaliana]
AT5G66052	4.59	15.15	43.01	25.52	AT5G66052	GO:0016020,membrane; 	--	NP_680472.1 transmembrane protein [Arabidopsis thaliana]
AT5G66320	50.07	36.10	27.79	25.94	AT5G66320	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0008270,zinc ion binding; GO:0030154,cell differentiation; GO:0043565,sequence-specific DNA binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0046872,metal ion binding; 	--	NP_201433.1 GATA transcription factor 5 [Arabidopsis thaliana]
AT5G66730	13.72	11.82	21.10	21.36	AT5G66730	GO:0000976,transcription cis-regulatory region binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0005515,protein binding; GO:0005634,nucleus; GO:0006355,regulation of DNA-templated transcription; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009937,regulation of gibberellic acid mediated signaling pathway; GO:0010029,regulation of seed germination; GO:0010431,seed maturation; GO:0046872,metal ion binding; 	--	NP_201474.1 C2H2-like zinc finger protein [Arabidopsis thaliana]
AT5G66900	2.51	3.75	7.63	6.32	AT5G66900	GO:0000166,nucleotide binding; GO:0005515,protein binding; GO:0005524,ATP binding; GO:0005829,cytosol; GO:0006952,defense response; GO:0012505,endomembrane system; GO:0043130,ubiquitin binding; GO:0043531,ADP binding; GO:0050832,defense response to fungus; 	--	NP_001331503.1 Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]
AT5G67240	18.95	19.96	40.45	46.67	AT5G67240	GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0005634,nucleus; GO:0016592,mediator complex; GO:0016787,hydrolase activity; GO:0090305,nucleic acid phosphodiester bond hydrolysis; 	REX1, REXO1, RNH70; RNA exonuclease 1 [EC:3.1.-.-]; K14570; 	NP_201525.2 small RNA degrading nuclease 3 [Arabidopsis thaliana]
AT5G67510	129.10	102.18	234.15	218.38	AT5G67510	GO:0002181,cytoplasmic translation; GO:0003723,RNA binding; GO:0003735,structural constituent of ribosome; GO:0005515,protein binding; GO:0005840,ribosome; GO:0006412,translation; GO:0009536,plastid; GO:0015934,large ribosomal subunit; GO:0022625,cytosolic large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0042273,ribosomal large subunit biogenesis; GO:0042788,polysomal ribosome; GO:1990904,ribonucleoprotein complex; 	RP-L26e, RPL26; large subunit ribosomal protein L26e; K02898; 	NP_201552.1 Translation protein SH3-like family protein [Arabidopsis thaliana]
AT5G67640	1.55	0.85	8.35	5.01	AT5G67640	GO:0008150,biological_process; 	--	NP_201565.1 hypothetical protein AT5G67640 [Arabidopsis thaliana]
ArthCp010	371.11	385.57	231.26	271.28	ArthCp010	--	ATPF0A, atpB; F-type H+-transporting ATPase subunit a; K02108; 	--
ArthCp025	52.56	32.93	9.20	6.37	ArthCp025	--	ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2]; K05581; 	--
ArthCp026	32.48	39.12	12.44	16.00	ArthCp026	--	ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2]; K05582; 	--
ArthCp033	97.09	135.94	74.79	68.00	ArthCp033	--	--	--
ArthCp038	2005.13	1422.72	2854.25	3239.13	ArthCp038	--	psbF; photosystem II cytochrome b559 subunit beta; K02708; 	--
ArthCp042	378.33	463.51	239.96	298.85	ArthCp042	--	psaJ; photosystem I subunit IX; K02697; 	--
ArthCp043	58.28	61.49	164.53	192.09	ArthCp043	--	RP-L33, MRPL33, rpmG; large subunit ribosomal protein L33; K02913; 	--
ArthCp044	318.51	310.52	575.65	524.54	ArthCp044	--	RP-S18, MRPS18, rpsR; small subunit ribosomal protein S18; K02963; 	--
ArthCp001	28.97	39.46	59.87	65.31	ArthCp001	--	RP-S12, MRPS12, rpsL; small subunit ribosomal protein S12; K02950; 	--
ArthCp051	507.63	719.85	1802.28	1439.47	ArthCp051	--	psbN; PsbN protein; K02715; 	--
ArthCp079	31.58	34.00	16.51	14.02	ArthCp079	--	ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2]; K05572; 	--
DA397_mgp01	610.11	757.39	1494.17	1225.53	DA397_mgp01	--	COX2; cytochrome c oxidase subunit 2; K02261; 	--
DA397_mgp37	116.45	101.85	232.02	171.37	DA397_mgp37	--	ND5; NADH-ubiquinone oxidoreductase chain 5 [EC:7.1.1.2]; K03883; 	--
DA397_mgp34	70.33	63.83	125.76	107.54	DA397_mgp34	--	ND1; NADH-ubiquinone oxidoreductase chain 1 [EC:7.1.1.2]; K03878; 	--
DA397_mgp17	3.35	3.68	15.43	8.26	DA397_mgp17	--	ATPeF0A, MTATP6, ATP6; F-type H+-transporting ATPase subunit a; K02126; 	--
DA397_mgp04	219.60	252.41	392.02	360.79	DA397_mgp04	--	ND4L; NADH-ubiquinone oxidoreductase chain 4L [EC:7.1.1.2]; K03882; 	--
DA397_mgp03	233.08	301.09	470.33	429.32	DA397_mgp03	--	--	--