Information for 8-TAAAAGGA (Motif 9)

G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
Reverse Opposite:
A G C T A T G C G A T C G C A T G C A T G C A T A G C T C G T A
p-value:1e-34
log p-value:-7.885e+01
Information Content per bp:1.760
Number of Target Sequences with motif4823.0
Percentage of Target Sequences with motif15.39%
Number of Background Sequences with motif3884.0
Percentage of Background Sequences with motif13.00%
Average Position of motif in Targets49.7 +/- 27.1bp
Average Position of motif in Background51.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KHDRBS1(KH)/Mus_musculus-RNCMPT00062-PBM/HughesRNA

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TAAAAGGA
TAAAAGG-
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
A C G T C G T A C G T A C G T A C G T A T A C G T A C G A C G T

AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TAAAAGGA-
-AAAAGGDG
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A A C G T
A C G T T G C A C G T A C G T A C G T A C T A G C T A G C A T G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGGA
GNCTATAAAAGG-
 A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

KHDRBS1(KH)/Homo_sapiens-RNCMPT00169-PBM/HughesRNA

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGGA
ATAAAAG--
 A C G T G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
C G T A A C G T C G T A C G T A C G T A C G T A T C A G A C G T A C G T

AZF1/MA0277.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TAAAAGGA--
-AAAAAGAAA
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A A C G T A C G T
A C G T C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A

CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TAAAAGGA-
-AAAAGTRM
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A A C G T
A C G T C G T A C G T A C G T A C T G A C T A G A C G T C T A G G T C A

croc/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGGA
ATAAAA---
 A C G T G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
C T G A A C G T C G T A C G T A G T C A C G T A A C G T A C G T A C G T

AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TAAAAGGA--
AWAAAGTDNN
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A A C G T A C G T
C G T A C G T A C G T A C G T A C G T A A C T G A G C T C G T A T C G A G T C A

dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAAAGGA
AAAAAGGC
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A
C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C

OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAAAAGGA--
AAAAAGTWRN
 G C A T T C G A C G T A C G T A C G T A C T A G T A C G T C G A A C G T A C G T
C T G A C G T A C G T A C G T A C G T A A C T G A G C T C G T A C T G A G C T A