Information for 7-GCTAATTA (Motif 7)

A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A
Reverse Opposite:
G A C T C G T A C G T A C G A T G A C T C T G A T A C G T A G C
p-value:1e-37
log p-value:-8.635e+01
Information Content per bp:1.592
Number of Target Sequences with motif6486.0
Percentage of Target Sequences with motif20.70%
Number of Background Sequences with motif5334.2
Percentage of Background Sequences with motif17.86%
Average Position of motif in Targets49.6 +/- 27.5bp
Average Position of motif in Background50.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ro/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GCTAATTA-
TGCTAATTAA
 A C G T A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
G A C T T C A G A G T C A C G T C G T A C G T A A C G T A C G T C T G A G T C A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCTAATTA
NCTAATTA
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

VSX2/MA0726.1/Jaspar

Match Rank:3
Score:0.92
Offset:1
Orientation:forward strand
Alignment:GCTAATTA-
-CTAATTAG
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GCTAATTA-
NGCTAATTAG
 A C G T A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G

EMX2/MA0886.1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GCTAATTA--
NCTAATTANN
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T A C G T
T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C

ap/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GCTAATTA-
NGCTAATTAG
 A C G T A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A T G C T C A G G A T C C G A T C G T A C G T A A C G T A C G T C T G A C T A G

PRRX2/MA0075.3/Jaspar

Match Rank:7
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GCTAATTA-
-CTAATTAA
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A C G T A G T C A G C T T G C A C G T A A C G T A C G T T C G A C T G A

ro/MA0241.1/Jaspar

Match Rank:8
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GCTAATTA
-CTAATTA
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A

LHX9/MA0701.2/Jaspar

Match Rank:9
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GCTAATTA-
-CTAATTAA
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A T C G A

VSX1/MA0725.1/Jaspar

Match Rank:10
Score:0.90
Offset:1
Orientation:forward strand
Alignment:GCTAATTA-
-CTAATTAT
 A T C G A G T C G A C T C T G A G C T A G C A T G C A T C T G A A C G T
A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T