Information for 21-ACAGGCTG (Motif 41)

C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 25.1bp
Average Position of motif in Background47.5 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAC1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCTG---
GACACGCTGGCA
 A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A G T C G T A C

SWI5/Literature(Harbison)/Yeast

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ACAGGCTG-
---GGCTGA
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G

CRZ1(MacIsaac)/Yeast

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACAGGCTG
-GAGGCTG
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G
A C G T A C T G C G A T A C T G A C T G A G T C A C G T A C T G

GRHL2/MA1105.2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACAGGCTG-
AAAACAGGTTTT
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCTG
CACAGN---
 A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAGGCTG-
-TWGTCTGV
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACAGGCTG
---NGCTN
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

bZIP52/MA1343.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGCTG----
TNACCAGCTGTCAN
 A C G T A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C A T G T G C A G T A C T G A C T C G A T A C G A G T C A C G T A C T G A C G T G T A C C T G A G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACAGGCTG---
-CCTGCTGAGH
 C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCTG-
AACAGGAAGT
 A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T