Information for 4-KGTCACGCGG (Motif 4)

C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
Reverse Opposite:
A T G C A G T C A T C G G A T C A C T G A C G T A C T G C G T A A G T C G T C A
p-value:1e-44
log p-value:-1.022e+02
Information Content per bp:1.786
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 28.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFE3/MA0831.2/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:KGTCACGCGG
-GTCACGTG-
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:KGTCACGCGG-
-GTCACATGAY
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

TFEC/MA0871.2/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:KGTCACGCGG-
NGTCACGTGNN
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G A C G T
A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G

CMTA3/MA0970.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:KGTCACGCGG
-NNNACGCGG
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
A C G T T A C G A G C T C T G A C G T A A G T C C T A G G A T C C A T G A C T G

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:KGTCACGCGG
GGTCACGTGC
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

CMTA2/MA0969.1/Jaspar

Match Rank:6
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:KGTCACGCGG---
----ACGCGGNNN
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C T A G A G T C C A T G A T C G G A C T C G A T G C A T

CBF1(MacIsaac)/Yeast

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:KGTCACGCGG
-GTCACGTG-
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
A C G T C T A G C A G T T A G C C T G A A G T C T A C G G C A T A T C G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:KGTCACGCGG
AGTCACGC--
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

PIF5/MA0562.1/Jaspar

Match Rank:9
Score:0.76
Offset:2
Orientation:forward strand
Alignment:KGTCACGCGG
--TCACGTGG
 C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
A C G T A C G T A G C T A G T C C G T A A G T C C T A G A C G T A C T G A T C G

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--KGTCACGCGG
NNGGTCACGCTC
 A C G T A C G T C A G T T C A G A C G T G T A C C G T A A G T C C T A G A T G C A C T G A T C G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C