Information for 16-GTCGGCCA (Motif 38)

A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.530
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.1 +/- 25.7bp
Average Position of motif in Background52.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GTCGGCCA
NNATGTCGGYNR
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
A G C T C A G T C G T A G C A T C A T G G C A T A G T C A C T G C T A G G A T C T C G A C T A G

pho/MA1460.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTCGGCCA---
NNCGGCCATNN
 A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T C A G C A T G G A T C T A C G C A T G T G A C T A G C T C G A A C G T G A C T C A G T

CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.80
Offset:-8
Orientation:reverse strand
Alignment:--------GTCGGCCA
NNNNNNWHGTCGGYN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
C G T A G C T A C G T A C G T A G A C T C G A T C G T A G A C T A C T G A C G T A G T C A C T G C T A G A G T C T C G A A C G T

DREB1A/MA0971.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GTCGGCCA
ATGTCGGCAA
 A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
C G T A G A C T C T A G G A C T T G A C A C T G C T A G A G T C T C G A T C A G

CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.79
Offset:-7
Orientation:reverse strand
Alignment:-------GTCGGCCA
NNNNNATGTCGGYVR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
G C T A C T G A C G T A G C T A C A T G C G T A C G A T A C T G A G C T A G T C A C T G C T A G G A C T T C A G C T G A

DREB1C/MA1670.1/Jaspar

Match Rank:6
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGGCCA--
NNNATGTCGGCAANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T
C G A T G C A T C G A T C G T A G C A T C T A G A C G T A G T C C A T G C T A G G A T C C T G A C G T A G C T A C G T A

CBF1/MA1224.1/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GTCGGCCA-
NATGTCGGCGAN
 A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T
A C T G C G T A G A C T A C T G C G A T A G T C A C T G C T A G G A T C T C A G C T G A G T C A

RAP210/MA1249.1/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCGGCCA---
TTTTGTCGGCAAAGG
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G C A T C G A T C A G T G A C T A C T G C G A T A G T C A C T G C T A G A G T C C T G A C T G A G T C A C T A G C T A G

CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GTCGGCCA
NATGTCGGYR-
 A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A
A C G T C G T A C G A T T A C G G A C T G A T C T C A G C T A G G A T C T C G A A C G T

CBF4/MA1218.1/Jaspar

Match Rank:10
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCGGCCA-
TGATGTCGGCGAA
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T
G A C T A C T G C G T A A G C T A C T G A C G T A G T C A C T G C T A G A G T C T C A G C T G A G T C A