Information for 14-CGCCACTC (Motif 36)

A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G A C G T A C T G A C T G A G T C A C T G
p-value:1e-14
log p-value:-3.418e+01
Information Content per bp:1.980
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 25.5bp
Average Position of motif in Background30.6 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/MA0373.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CGCCACTC
CGCCACC-
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C
A G T C A C T G A G T C A G T C G T C A A G T C G A T C A C G T

MET31/MA0333.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CGCCACTC-
CGCCACANN
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T
G T A C A C T G A G T C A G T C C G T A A G T C G T C A A T G C G A C T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CGCCACTC-----
TAACCACTCAAGAA
 A C G T A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

MET32/MA0334.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGCCACTC
CGCCACA-
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C
G T A C C T A G A G T C A G T C G C T A A G T C T G C A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.75
Offset:-7
Orientation:forward strand
Alignment:-------CGCCACTC--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGCCACTC--
MRSCACTYAA
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

z/dmmpmm(Down)/fly

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CGCCACTC-
---CACTCA
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T T A G C C T G A A G T C G C A T T G A C C G T A

brk/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CGCCACTC
AGCGCCA---
 A C G T A C G T A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C
C T G A C T A G A G T C A C T G A G T C A G T C G T C A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCCACTC---
AGCCACTCAAG
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

z/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGCCACTC-
---CACTCA
 A G T C A C T G A G T C A G T C G T C A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T T A G C C T G A A G T C A C G T A G T C T C G A