Information for 17-CCTAHCTWTT (Motif 27)

T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
Reverse Opposite:
T C G A T G C A C G A T T G C A A T C G C T A G C G A T G T C A A C T G A C T G
p-value:1e-19
log p-value:-4.476e+01
Information Content per bp:1.505
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.2 +/- 26.3bp
Average Position of motif in Background41.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB62/MA1294.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTAHCTWTT--
NTACCTAACTTTTNT
 A C G T A C G T A C G T T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T A C G T A C G T
G A T C G C A T C T G A A G T C A G T C C G A T C G T A G T C A G A T C G C A T G C A T C G A T G C A T C G A T G A C T

MSI1(RRM)/Homo_sapiens-RNCMPT00176-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTAHCTWTT
-CTAACTA--
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A C G T A G T C A G C T G C T A G T C A A G T C A C G T C G T A A C G T A C G T

MSI1(RRM)/Homo_sapiens-RNCMPT00041-PBM/HughesRNA

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTAHCTWTT
-CTAACTA--
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A C G T A G T C A G C T C G T A G C T A A G T C A C G T C G T A A C G T A C G T

HNRNPAB(RRM)/Tetraodon_nigroviridis-RNCMPT00245-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTAHCTWTT
-CTATCTA--
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A C G T A G T C C G A T C G T A G C A T G T A C A G C T C G T A A C G T A C G T

DAZAP1(RRM)/Homo_sapiens-RNCMPT00013-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTAHCTWTT
-CTACCTA--
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A C G T A G T C G C A T G C T A G T A C A G T C A C G T C G T A A C G T A C G T

CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTAHCTWTT
--KYACTTTT
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A C G T A C G T C A G T G A T C T G C A A G T C A G C T A C G T A C G T G C A T

MYB57/MA1293.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCTAHCTWTT
TTTACCTAACTTTT
 A C G T A C G T A C G T A C G T T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
G A C T G A C T A C G T C T G A A G T C A G T C C G A T C G T A C G T A G A T C G A C T G A C T G C A T G C A T

AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTAHCTWTT--
--TMACTTTTTV
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T A C G T A C G T
A C G T A C G T A G C T G T C A T G C A A G T C A C G T A C G T A C G T C G A T G A C T T A C G

br(var.2)/MA0011.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTAHCTWTT-
---TACTATTT
 T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T A C G T
A C G T A C G T A C G T C G A T G C T A A G T C A G C T C G T A A C G T C G A T A G C T

MYB.PH3(2)(MYB)/Petunia hybrida/AthaMap

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTAHCTWTT
GTAACTAACTTTT
 A C G T A C G T A C G T T G A C T G A C C A G T G C T A G A T C T A G C A C G T G C T A A C G T A G C T
A T C G A G C T C G T A C G T A A G T C C G A T C G T A G T C A A G T C C G A T G A C T G A C T G A C T