Information for 17-CACTCGAACTTT (Motif 23)

A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C G T A C G T A G T C A C T G C G T A A C T G A C G T A C T G
p-value:1e-21
log p-value:-4.917e+01
Information Content per bp:1.936
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 25.0bp
Average Position of motif in Background55.1 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CACTCGAACTTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACTCGAACTTT
ACCACTCAAAA---
 A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

tll/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CACTCGAACTTT
---TNTNACTTT
 A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T A C G C G T A A G T C A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CACTCGAACTTT
---ATGAACTTT
 A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

z/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACTCGAACTTT
CACTCAA-----
 A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
T A G C C T G A A G T C A C G T A G T C T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACTCGAACTTT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACTCGAACTTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CACTCGAACTTT
TAACCACTCAAGAA--
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTCGAACTTT
NSCACTYVAV----
 A C G T A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

tin/MA0247.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACTCGAACTTT
CCACTTGANA---
 A C G T A G T C C G T A G T A C A C G T A G T C C T A G C G T A C G T A A G T C A C G T A C G T A C G T
T A G C A G T C C G T A A G T C A C G T A G C T T C A G C T G A T C G A G C T A A C G T A C G T A C G T