Information for 2-WWAAVCATGY (Motif 2)

C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T
Reverse Opposite:
C T G A A T G C C T G A A G C T T C A G A T G C A C G T G C A T C G A T G C A T
p-value:1e-390
log p-value:-8.985e+02
Information Content per bp:1.601
Number of Target Sequences with motif8879.0
Percentage of Target Sequences with motif28.33%
Number of Background Sequences with motif5531.9
Percentage of Background Sequences with motif18.52%
Average Position of motif in Targets50.1 +/- 26.7bp
Average Position of motif in Background49.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:WWAAVCATGY
---AGCATGC
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C T G T G A C

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:2
Score:0.81
Offset:3
Orientation:forward strand
Alignment:WWAAVCATGY-
---TGCATGCA
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C T A A G C T C T A G G A T C C G T A

Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:WWAAVCATGY
---ACCATGN
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T
A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G C T G A

RBFOX1(RRM)/Homo_sapiens-RNCMPT00168-PBM/HughesRNA

Match Rank:4
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:WWAAVCATGY-
----GCATGCA
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A

LEC2/MA0581.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:WWAAVCATGY-
ATGTGCATGNN
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T
C G T A C G A T C A T G A G C T A C T G A G T C C G T A A C G T C T A G A T G C G T C A

A2BP1(RRM)/Drosophila_melanogaster-RNCMPT00123-PBM/HughesRNA

Match Rank:6
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:WWAAVCATGY--
----GCATGCAN
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A G A T C

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:7
Score:0.78
Offset:3
Orientation:forward strand
Alignment:WWAAVCATGY
---TGCATGA
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T
A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T C A

ASD-1(RRM)/Caenorhabditis_elegans-RNCMPT00180-PBM/HughesRNA

Match Rank:8
Score:0.78
Offset:3
Orientation:forward strand
Alignment:WWAAVCATGY
---TGCATGA
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T
A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T C A

MXI1/MA1108.2/Jaspar

Match Rank:9
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:WWAAVCATGY---
---NNCATGTGNN
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

ABI3/MA0564.1/Jaspar

Match Rank:10
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:WWAAVCATGY--
---TGCATGCAG
 C G T A G C T A C G T A T G C A T A C G A G T C C T G A A G C T A T C G G A C T A C G T A C G T
A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C G T A T C G T A G C C T G A T C A G