| p-value: | 1e-30 |
| log p-value: | -7.119e+01 |
| Information Content per bp: | 1.807 |
| Number of Target Sequences with motif | 54.0 |
| Percentage of Target Sequences with motif | 0.17% |
| Number of Background Sequences with motif | 6.4 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 48.2 +/- 25.7bp |
| Average Position of motif in Background | 59.6 +/- 16.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.02 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA
| Match Rank: | 1 |
| Score: | 0.78
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CGTACACGCG
-TTACACG-- |
|
|
|
Tp_0225(RRM)/Thalassiosira_pseudonana-RNCMPT00225-PBM/HughesRNA
| Match Rank: | 2 |
| Score: | 0.73
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CGTACACGCG
--AACACGC- |
|
|
|
PL0004.1_hlh-27/Jaspar
| Match Rank: | 3 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CGTACACGCG---
NNGGGACACGCGCNT |
|
|
|
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer
| Match Rank: | 4 |
| Score: | 0.72
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CGTACACGCG----
--HHCACGCGCBTN |
|
|
|
PL0018.1_hlh-25/Jaspar
| Match Rank: | 5 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CGTACACGCG----
NNGGGACACGCGCCNN |
|
|
|
FHY3/MA0557.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.70
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CGTACACGCG----
--CTCACGCGCTCA |
|
|
|
Ahr::Arnt/MA0006.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.70
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CGTACACGCG
----CACGCA |
|
|
|
SPL12/MA1057.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CGTACACGCG
NCCGTACN---- |
|
|
|
CAMTA1/MA1197.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.70
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CGTACACGCG----
--NNCACGCGCTTT |
|
|
|
SPL9/MA1322.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CGTACACGCG
NTCCGTACAAN-- |
|
|
|
