Information for 6-CAAGTAWAATTG (Motif 11)

A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C G T G C T A A C G T C G T A A G T C A C G T A G C T A C T G
p-value:1e-32
log p-value:-7.397e+01
Information Content per bp:1.871
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.1 +/- 24.6bp
Average Position of motif in Background34.5 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAAGTAWAATTG-
-----ATWATTGR
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T C G T A A C G T A C G T A C T G T C A G

CBF(- other)/several species/AthaMap

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CAAGTAWAATTG-----
----NNNNATTGNNNNN
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A C G A T C G T A C G T A A C G T A C G T A C T G C A T G G C T A G C T A G C A T G C A T

YHP1/MA0426.1/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CAAGTAWAATTG
------TAATTG
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G

YHP1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CAAGTAWAATTG
------TAATTG
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G

YHP1(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CAAGTAWAATTG
------TAATTG
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CAAGTAWAATTG---
----NNTAATTGGNN
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTAWAATTG--
NNTAATTATAATTNNN
 A C G T A C G T A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

ap/dmmpmm(Down)/fly

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAAGTAWAATTG
----TATTATT-
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T C G T A C G A T C A G T A C G T

A1CF(RRM)/Homo_sapiens-RNCMPT00001-PBM/HughesRNA

Match Rank:9
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CAAGTAWAATTG
-----NTAATTG
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T T C A G

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CAAGTAWAATTG-------
-----AAAATTGTTATGAA
 A G T C T C G A C G T A C T A G A C G T C G T A C G A T C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A