Information for 1-NRCACGTG (Motif 1)

G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G
Reverse Opposite:
T G A C T C G A A G T C T C A G G A C T C A T G A G C T C A T G
p-value:1e-1428
log p-value:-3.289e+03
Information Content per bp:1.545
Number of Target Sequences with motif7788.0
Percentage of Target Sequences with motif24.85%
Number of Background Sequences with motif2748.1
Percentage of Background Sequences with motif9.20%
Average Position of motif in Targets50.2 +/- 25.5bp
Average Position of motif in Background50.3 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BEE2/MA0956.1/Jaspar

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NRCACGTG--
AGCACGTGCT
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T
G C T A A T C G G T A C C G T A G A T C C T A G G C A T C A T G T A G C C G A T

MYC3/MA0568.1/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NRCACGTG-
-GCACGTGC
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T
A C G T T A C G G T A C C T G A A G T C C T A G G A C T A C T G A T G C

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:NRCACGTG
--CACGTG
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G
A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NRCACGTG
NVCACGTG
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-NRCACGTG------
NNNCACGTGNNNNNN
 A C G T G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C C T G A G A T C C G T A G A T C C T A G G A C T C T A G G A C T T C A G G C T A G C T A G C A T G C T A

At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--NRCACGTG-----
NNNNCACGTGNNNNN
 A C G T A C G T G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T G C A T A G T C T C A G G A T C C G T A G A T C C T A G G C A T C T A G A G C T T C G A C G T A G C T A G C A T

BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NRCACGTG----
NNCACGTGNNNN
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T A C G T A C G T
C T G A C A T G G T A C C G T A G A T C C T A G G C A T A T C G G T C A G A C T G C A T G C A T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NRCACGTG--
--CACGTGNC
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T
A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

PHYPADRAFT_143875/MA0988.1/Jaspar

Match Rank:9
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NRCACGTG--
CGCACGTGCG
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T
G A T C T A C G G T A C C G T A G A T C C T A G G C A T C A T G A T G C C T A G

BIM2/MA0965.1/Jaspar

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NRCACGTG--
GGCACGTGCC
 G T A C T C G A G T A C C T G A A G T C T C A G A G C T A C T G A C G T A C G T
T A C G C A T G G T A C C T G A G A T C C T A G G A C T C A T G G T A C A T G C